LOC120543755


Basic Information

Item Value
gene id LOC120543755
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 25234466 ~ 25269458 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776988.1
GCGCATCATCATCACCCCACCAAAGCTCTGCTGTTGAAGCGGCTGCTACCTCATCatgatgtgatttttttttttctcatcatcCCTGGAAACAGAGATGTCTGATAGACAGAATTAATGTATTGATCTCTTGGACTTTTTCAGGATTACGTTTCGGTGCCTCTCCAGCGTATTTGCAGCCTGTTCGTGTCGCCCAGACATGGCACAGCAGAACGGTGCTGCCAAGAAGAACCCGGCTGTTGCGGCATTGCACTCTCACTTCATTGTGGGATCAGTATCGGAGGAAAACTCAGAGGATGAAATCCAAGGGAAGCCTGACTTGCGGCTGGAGGAAAAGGAGACTCGCTCCTTGTCGCCATCCTCTGATAGCTCAAGCAGCACCTTTGATATGGGATTCGACAACAATGATGGCCCCTTGCACAATCTAAGACCAAGCATGTCGGGGCTGCACCTGGTAAAGCAAGGCAGAGATCGCCGGCGTATAGATCTCCAGAGGGACTTCACTGTGGCTTCTCCTGCTGAATTTGTCACCCGCTTTGGTGGCAACAAGGTTATCGAGAAGGTGCTTATCGCCAACAATGGCATTGCGGCGGTCAAGTGCATGCGCTCCATCCGCCGCTGGGCCTATGAGATGTTTCGCAATGAAAGAGCAATCCGCTTTGTTGTAATGGTGACCCCAGAGGACCTGAAGGCCAATGCAGAGTACATTAAAATGGCCGATCATTACGTGCCTGTGCCAGGAGGGACTAATAACAACAACTATGCTAATGTCGAGCTCATTCTGGACATTGCCAAACGCATACCTGTTCAGGCTGTGTGGGCTGGATGGGGTCATGCCTCAGAGAACCCCAAACTTCCAGAGCTGCTTCATAAGAATGGCATCGCTTTCATGGGTCCCCCAAGTCAGGCTATGTGGGCTCTAGGAGACAAGATTGCTTCGTCCATCGTGGCTCAGACTGCTGGCATCCCAACCCTGCCCTGGAGCGGCTCAGGCCTGACAGTAGAATGGACAGAGAACGaccaaaagaagaaaataatcaacgTTCCTTCTGACGTGTATGAACTTGGCTGCATCCAGGATGTGGAGGATGGCCTGAAGGCTGCAGAAAAAGTCGGCTACCCTGTCATGGTGAAGGCCTCAGAGGGAGGCGGAGGAAAAGGCATCCGTAAAGTCAACTCAGTTGATGATTTCCCTAATCTCTTCAGACAGGTCCAGGCAGAAGTTCCAGGATCACCTATTTTCGTCATGCAGCTGGCTAAGCACGCCCGCCACCTAGAGGTCCAGATCCTGGCTGATCAATATGGCAATGCCATTTCCCTGTTTGGTAGAGACTGTTCTGTGCAGCGACGGCACCAGAAAATCATAGAGGAGGCTCCTGCTACCATCGCCACTTCGGATGTGTTTGAGGATATGGAAGGGTGTGCAGTGAAGCTGGCTAAGATGGTGGGTTACGTCAGTGCAGGTACAGTAGAGTATCTCTACAGCCAGGATGGCAGCTTCTACTTCCTGGAGCTCAACCCTCGTCTGCAGGTGGAACACCCCTGTACGGAGATGGTGGCTGATGTCAACCTGCCTGCTGCCCAACTGCAGATTGCTATGGGTATTCCTCTTCAAAGAATCAAAGACATCCGGATGCTTTATGGGGTCCAGCCCTGGGGAGACTCTCCAATTGACTTTGAGGGTCTGTCGACAGCCCCCTCCCCACGGGGCCATGTCATTGCAGCACGTATTACCAGTGAAAACCCTGATGAGGGCTTCAAACCAAGCTCTGGAACAGTGCAAGAGCTGAATTTCCGCAGCAATAAGAACGTGTGGGGCTACTTCAGTGTTGCAGCGGCTGGAGGGCTGCACGAGTTTGCTGACTCCCAATTTGGACACTGTTTCTCTTGGGGAGAGAATCGGGAAGAAGCCATCTCCAACATGGTGGTAGCGCTGAAGGAATTGTCTATCAGAGGAGACTTCAGGACCACAGTGGAATACCTCATTAAGCTGCTGGAGACGGAAAGCTTTCAGCACAACAGCATTGACACCGGCTGGCTGGACAGGCTTATCTCTGAGAAGATGCAGgCGGAGCGTCCCAATACCATGCTGGGAATTGTGACCGGGGCTCTTCATGTGGCAGATGTCAATCTAAGGAACAGTGTGTCCAACTTTCTGCATTCTCTGGAAAGGGGCCAGGTGCTGCCAGCTCACACACTACTCAACACTGTGAACGTGGAGCTGATCTATGAAGGCACTAAGTACGTCCTGACAGTGACGCGCCAGTCTCCCAACTCCTATGTGGTCATCATGAACAACTCCTCGGCTGAGGTGGACGTACATCGGCTCAGTGATGGAGGTCTTTTGCTGTCTTATGATGGAAGCAGCTACACTACCTACATGAAGGAAGAGGTGGACAGGTATCGCATCACGATTGGGAACAAGACCTGTGTTTTTGAAAGGGAGAATGATCCTTCGCTGCTACGATCTCCTTCAGCAGGAAAGCTTATCCAGTACACAGTCGAGGATGGTGGGCACGTGTTTTCTGGCCAGTGCTACGCTGAAATAGAGGTGATGAAGATGGTAATGACCCTCACAGCTTTGGAGTCTGGTTGTATTCACTATGTGAAGAGGGCTGGAGCAGCACTGGACCCTGGCTGTGTCATTGCCAAGCTGCAACTGGATGACCCAAGCAGAGTGCAACAGGCAGACCTGTTCACAGGGCCACTGCCTACTATCCAGGCAGTAGCTCTGAGAGGCGAAAAGCTACACAGAGTCTTCCACAACACACTGGATCATCTTGTTCACATAATGAGTGGCTACTGTCTTCCTGAGCCCTTTTTCAGTGCTAGGTTGAAAGAGTGGGTGGAAAGGATGATGAAAACCATGCGTGATCCCTCTTTGCCACTGTTGGAGCTTCAAGACATCATGACCAGTGTGTCAGGTCGCATCCCCCCTGCTGTGGAGAAGTGCATCAAGAAGGAGATGGCTCAGTATGCTAGCAACATCACCTCCGTGCTCTGCCAGTTTCCCAGCCAACAGATCGCAAACATCCTGGACAGCCATGCTGCTACTCTTAACAAGAAGTCAGAGAGAGAAGTCTTCTTTATGAACACACAAAGCATTGTTCAGCTGGTGCAGAAGTATCGCAGTGGCATCAGAGGTCACATGAAGGCGGTGGTGATGGACTTGCTCAGACAGTACCTGAAAGTAGAGATCCAGTTTCAGAATGGACACTATGacaagtgtgtgtttgcactgcGTGAGGAAAACAAAGGCGACATGGCCAACGTGCTCAACTACATCTTCTCCCATGCTCAAGTCACCAAGAAGAACCTGCTGGTTACTATGCTGATTGATCAGCTGTGTGGCCGGGATCCCACACTGACAGATGAACTGATGGCCATCTTGACTGAACTCACCCAGCTCAGCAAGACAACCAATGCCAAGGTGGCACTGCGGGCCCGGCAGGTGTTGATAGCTTCCCACCTCCCTTCTTATGAGCTACGACACAACCAGGTGGAGTCCATCTTCCTCTCTGCAATTGACATGTATGGACACCAATTCTGCATCGAGAACCTGCAGAAACTGATCCTTTCAGAAACGTCCATCTTTGATGTTCTGCCCAACTTCTTCTACCACAGTAATCAGGTAGTCAGGATGGCTGCTCTTGAGGTGTACGTTCGCAGAGCATACATTGCCTATGAGCTCAACAGTGTTCAGCATCGTCAACTGAGGGACAACACGTGTATAGTAGAGTTCCAGTTCATGCTTCCCACCTCGCATCCCAACAGAGGGAACATCCCCACTCTAAACAGGAGAATGTCTGCTCCAATCCTGGACATTATAAATGCCGCGGACACTAGATTTCAGGAAACTAAACCCCAGGACCTTAAAGCACAAGATAGTAAATCTAAGGATGATAGTGCTGAGAAGAAAAACGCCTCAGATACGGATACTGTGGACAGGATGTCATTCTCATCCAACCTAAACCACTACGGCATGGTGCATGTAGCCAGCGTCAGTGACGTTCTGCTTGACACGTCCTTTACGCCACCTTGTCAGCGCATGGGAGCCATGGTTGCGTTCCGCTCCTTCCAGGAGTTCACCAGGAACATAAACGACGTGTTGAGCTGCTTCTCTGACTCTCCGCCATCAAGTCCCACCTTCCCAGAGGGAGGTAATCCTGTCCTGTATGGCGAAGAGGACAACAAGAGCGTGCAGGACGAGCCTATCCATATCCTGAATGTGGCTATAAAGACCGACAGCGACATTGATGACGACGGCCTGGCCGCCATATTCCGAGAGTTTACTCACTCAAAGAAATCTATGCTGTTTGAACATGGCATCCGTAGGCTGACTTTCCTTGTGGCCCAGAAGAGAGAATTTCCCAAATTTTTCACATTCCGTGCAAGAAACAAGTTTGAGGAGGACAGGATCTATCGTCATTTGGAGCCGGCACTAGCTTTCCAATTGGAGCTCAATCGCATGCGCAATTTTGCCCTAAGTGCCATCCCATGTTCCAACCATAAGATGCACTTGTACCTGGGTGCAGCCCGTGTGGAGGTGGGCACAGAGGTTACGGACTACCGTTTCTTTGTGCGAGCCATTATCCGCCACTCCGATCTGGTCACAAAGGAGGCCTCTTTTGAATACCTTCACAATGAGGCAGAGCGTCTGCTGCTggaagccatggatgagctgGAGGTGGCTTTCAACAACACGACTGTACGAACTGACTGCAACCATATCTTCCTCAATTTTGTCCCCACAGTCATCATGGACCCATCAAAGATTGAGGAGTCTGTGCGCTCCATGGTGATGCGTTACGGCAGCCGTTTGTGGAAGCTGCGTGTCCTGCAGGCCGAACTGAAAATTAACATCCGCCTGACTCCAACTGGAAAGCAAATCCCCATCCGCCTCTTCCTCACCAATGAATCAGGCTACTACCTGGACATCAGCCTGTACAAGGAGGTCACTGATTCCCGAACGGGACAGATCATGTTTCAAGCATATGGTGACAAGCAGGGTCCGCTGCACGGCATGCTCATCAACACCCCCTATGTGACCAAGGACCTGCTGCAGTCTAAGCGCTTCCAGGCGCAGTCTCTGGGCACCACCTATGTCTATGACTTTCCAGAAATGTTCAGACAGGCTCTGAAAAAGCTGTGGCACTCATTCCAGGCCTTTGCCACCTTACCCAAATGCCCGCTTCCTTCTGAGCTGCTTACCTTCACAGAGCTGGTTCTTGACGCCCAAGGCCAGCTGGTGCAGATGAACAGACTGCCAGGGGGCAATGAGATTGGTATGGTGGCATGGCGGATGACCCTGCGTACTCCAGAATATCCAGCGGGGCGTGAGATCATCGTCATAAGtaatgacatcacacacaagATAGGCTCATTTGGACCCCAGGAGGACTTGTTGTTCCTGCGAGCCTCAGAGATGGCACGAGAGAGCGGCATCCCCCGAATCTACATCGCAGCCAACAGTGGCGCCCGCATTGGGCTGGCAGAGGAAATCAGACACATGTTCCATGTTGCCTGGCAAGATACAGCTGACCCTTATAAGGGTTTCAAGTATCTCTACCTCACACCTCAGGACTACAAGAAAGTTTCCGCCTTGAACTCTGTGCATTGCGAACATGTGGAGGATGAGGGAGAATCTAGGTACAAGATCACTGACATCATTGGAAAAGATGAAGGGTTGGGTGTGGAGAATCTGAAAGGGTCTGGAATGATTGCTGGAGAATCCTCTCTGGCTTATGATGAGATCATCACCATGAACCTGGTCACATGCAGGGCCATAGGGATTGGGGCCTATCTGGTGAGGCTTGGACAGAGAACCATTCAAGTGGACAACTCTCACATTATCCTTACTGGAGCTGGAGCACTCAACAAGGTGCTGGGCAGAGAAGTGTACACATCAAACAACCAACTTGGTGGCATTCAAATCATGCACAACAATGGTGTGACCCACTCTACTGTTTGTGACGACTTTGAGGGAGTCTTCGCACTTCTGCAGTGGCTGTCCTACATGCCCATGTGTAAATCTAGTCCAGTGCCCATCCTCAACGCCAAGGATCCCATAGATCGTCTGGTGGATTTTGTGCCTACAAAGACTCCGTATGACCCTCGCTGGATGCTAGCAGGACGTCCCAGCCCGACTCAAAAGGGGACCTGGCAGAGTGGCTTTTTTGACCAGGGCTCCTTCATGGAGATCATGCAGCCATGGGAGAGTGTAGTGGTAGGCAGAGCCAGACTGGGTGGGATACCTACCGGAGTGGTCGCCGTGGAAACCAGGTCAGTGGAGCTGTCAATCCCAGCCGATCCAGCCAATTTGGACTCTGAGGCGAAGATCATCCAGCAGGCAGGGCAGGTGTGGTTCCCAGATTCTGCTTTCAAAACAGCCCAGGCCATTAAAGACCTGAACAGAGAGGGCCTACCTCTTATGGTGTTTTCAAACTGGAGGGGCTTTTCTGGAGGAATGAAAGATATGTACGACCAGGTGTTGAAGTTTGGGGCCTACATTGTGGACGGGCTAAGGGAGTACAAGCAGCCCGTACTGGTTTATATCCCCCCCCAGGCTGAGCTGAGAGGAGGATCCTGGGTGGTTATAGATCCCACCATCAACCCCCGTCACATGGAGATGTACGCTGACAAGGACAGCCGAGGTGGAGTTTTGGAGCCTGAAGGAACAGTGGAGATCAAATTCAGGAAAAAGGACCTGGTGAAGACAATGAGGAGAGTGGATCCGATCTACATGGGCTTGGCTGAAAAACTGGGAACACCAGAGCTGAGTCCCCCTGATTGTAAAGAGCTGGAGACCAAGCTGAAGGAGCGCGAGGAGTTTCTCCTGCCTATCTACCACCAGGTGGCTGTGCAGTTTGCAGACCTCCACGACACCCCAGGTCGCATGCAAGAGAAGGGCGTAATAACGGATATCCTTGATTGGCCAACGTCCCGTCAGTTCTTTTACTGGCGCCTGCGGCGCCTGCTGCTGGAGGACACCGTGAAGATGAAGATCCAAGCGGCCAACAGTGAGCTGACAGACGGACAGACCCAGGCAATGCTGCGCCGCTGGTTTGTGGAGGCCGAGGGGACTGTCAAGGCCTATCTGTGGGATAATAATGAAGAGGTGGTGGCATGGCTGGAGAGGCAACTAGCTGAAGAAGAGGGCGCAAGGTCTGTCGTCGATGAGAACATCAAGTACATCCGCCGAGATCACATCCTCAAGCAGATACGCAGcctcGTCCAAGCCAATCCAGAGGTTGCCATGGATTCTATAGTGCACATGACCCAGCACATCTCGCCCACACAGAGAGCCGAGGTGGTCCGAATCCTGTCCACAATGGAGACGTCAGCCTCCTCCTAGTGGGAGTCTGGCCTCTCCTCCCCGCCTGGCTGAAGCACGGCTCAGGCCGCAACCACAGCCAAAGGAAGCCCGGCTCAGCCAGACCTGCTCCGGACTGAGACCTGGGCTGGAAACTGAGGCTGGAGGAGCCAACAGGATGGCCCTACTGGTTACTGATGAATTGTTGGCTATGATTCTTACTAAGCAAGGGTTCACATGACTGACATCAATTAAGACGTTTTGTAAATTGTTTTACATGTACGCTAGTGTTGAGATAAATCCATGTATTTGTATTCAAGTGCAATTGAAAATTGACTAAAGAAATATCTAATATGGTCTGTTTGGAGTTTACATAGTTGGCCCAGATGGATGTTTGATGCTTCCATGATAATCAGTGACCTCAACACAAcaataaatttaaaaatgttgtcATATTTAAAATGCACCTTGGTTTGTGACATATGCTTGTTCAAATTCGCAAGCATTTTGATGACCGACTCGACAATGACAACACATTGCTGGGTGCATTAGCGATAAAGGGGTTTTTACACTTCTAAATAAGGAGTCCTTAGTTACTGAACAAAGACAGGGAACTCTTTAACAGATCTGGACAGGAGAGCCCAGCAGGGAGCAGGGACAAGGTCCCTTTTAGACCCCGACTGTTTCACAGTTACCCTGCAGTGAGCAACGGGCAGTTCGCCTCACAACAAAACCACAGCAGCTGTCCCGTCTGTTCTCactcacacagtacacacatgcTGCTTGAGATGCACTTTACTGCTTACTGTTCACTCACATTGCACCCAGAATCTAACGGGCCCTGTTTTAACTGCTGCATCTTGCATATATACAAACATGCAAAAACCCTACATGCACAAAGTGGTACAAGCAgtaatacacacagacataataatAGTTAAAATGGGCATTGATAATGGGACTATGTAGAGTGGTTAACAGCATGTAGTCTGTATCCCTTggcttacttttttttttttggacaactGGTTTTAGTGTATGCTCCTTAAACAAATTATtacaattttattattttttttaactaaagaaATATTTTTGAATCAACAATTGGATGGCTAAATCGTAAACTgtctgtgaagaaaaaaaaaaaagactgttcACTGAACTTACATGTTACATGTTAAATATGGTGTCTAATTTACACTGTAACCCACACTAACTGTTCTATTTAAAGTTTGTACCTTATGTACATGAAATGTTacttatatttaatattattttttgaaATTAATGTTTGAATCGCATAGTACTTCTCTACTTGAGTTTGTTACTGAAGACAGGCATAGTGTGGCATCTGTATGAGAATAAGAGTACATAGTAACAGTAAAACAGCACCCTAATGTTTCAGTCCTGTAGATCATTGTGTCATATATGCTCTGCAGAAAATCCAACTTGAAATTGCTTAGTGGTCCATGCTGTGCCTTTCACATGGCTGTACTGTATTGACATGTAGTCCAGTTTCTTTATAAGTAACTGGTTGGAGAGGATGGAGAACAATTTAAACTGAAGACTCTAACTGTGTGTGCAAATCTAATAAAGCTTACCCAACATAGTTGGAAGTGTGTgtgcaaaaa

Function

GO: NA

KEGG:

id description
K11262 ACACA; acetyl-CoA carboxylase / biotin carboxylase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776988.1 True 8946 mRNA 0.49 55 25234466 25269458

Neighbor

gene id symbol gene type direction distance location
vezf1a vezf1,LOC103359320 coding downstream 250335 24967825 ~ 24984131 (-)
ksr1a ksr1 coding downstream 274765 24930291 ~ 24959701 (-)
LOC120575606 NA coding downstream 310165 24920275 ~ 24924301 (-)
LOC120575671 NA coding downstream 315351 24915213 ~ 24919115 (-)
tbc1d8b tbc1d8b coding downstream 646910 24571594 ~ 24587556 (-)
LOC120575594 NA coding upstream 3353 25272811 ~ 25279959 (-)
LOC120544428 LOC104955023,LOC103370384 coding upstream 31106 25300564 ~ 25308323 (-)
LOC120544470 LOC103357746,LOC104954804 coding upstream 156051 25425509 ~ 25512356 (-)
LOC120544034 cldn7,LOC104920020,LOC106510789 coding upstream 709769 25979227 ~ 25983358 (-)
LOC120543604 NA coding upstream 715855 25985313 ~ 25998490 (-)
G168657 NA non-coding downstream 66234 25157523 ~ 25168232 (-)
G168570 NA non-coding downstream 601126 24628399 ~ 24633340 (-)
G168561 NA non-coding downstream 627304 24606212 ~ 24607162 (-)
G168515 NA non-coding downstream 756166 24474533 ~ 24478300 (-)
G168504 msn,LOC107103672,LOC106955558,LOC101079839,LOC102221775 non-coding downstream 764351 24466751 ~ 24470115 (-)
G168713 NA non-coding upstream 29119 25298577 ~ 25310102 (-)
LOC120544369 NA non-coding upstream 249011 25518469 ~ 25619997 (-)
G168754 NA non-coding upstream 408419 25677877 ~ 25678225 (-)
G168775 NA non-coding upstream 532332 25801790 ~ 25802142 (-)
G168776 NA non-coding upstream 548821 25818279 ~ 25818493 (-)
LOC120544362 msi2,LOC103475888 other downstream 329613 24655803 ~ 24904853 (-)
LOC120543987 NA other downstream 737884 24490560 ~ 24496582 (-)
radx LOC103366308,LOC106923634,LOC103133962,LOC106955728 other downstream 828589 24395776 ~ 24405877 (-)
LOC120544713 LOC104954531 other downstream 1258145 23974554 ~ 23976321 (-)
thoc2 thoc2,LOC102794734 other downstream 1285606 23920564 ~ 23948860 (-)
pcdh1a LOC103357738,LOC108233889,LOC101479736,LOC102299879 other upstream 354277 25623735 ~ 25723218 (-)
vamp2 vamp2,mpp1,LOC103367795,LOC104941032,LOC107742350,LOC107720682,LOC107082578,LOC107386619 other upstream 955361 26224819 ~ 26236194 (-)
ammecr1 ammecr1 other upstream 1305471 26574929 ~ 26612717 (-)
G168964 NA other upstream 1412056 26681514 ~ 26684956 (-)
gng3 gng3,LOC107559409 other upstream 1419421 26688879 ~ 26693041 (-)

Expression


Co-expression Network