LOC120544714


Basic Information

Item Value
gene id LOC120544714
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23969493 ~ 23971472 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778666.1
AGGGTTGTTTTTGCCATCTCGAACTGTATTTTGAGACTCCCTTTGGACCAGGAAAATGTATGCAGCTTTAACGCTCTTCGTCTTCATCTGCTTGACTGCCACCACCCATGCAGATCACCATCAGCCTTGTCATGCACCCAATATGACAGGATTCATGAATGTGTTAAGCCTTAAGGGTGAATTGAAAGCATTTGGTGCATTCACTTATGACTCAATGGGCAAGAAACTACGGTTCAGATCAAACGAGAGCCACCCCGACAACACATCCGTAGGTTTGGATGTGCTGATGTTTTTCGATGAGGGAATATTCTATGAGATTGACAGCAAAAACCAGAGctgtgagaaaaaaacattgcaaTGCACCCAGCACCCTCTAGATATCCCCGATGATGCAACATTCATGACTACAGTAAACACTGGGAATCCATCCATTGAAGGGGAGGGATTAAAAATCAATTCATGGACAGGATCAATGCCAGACAAGAAAGGCTGGTACTACATGGCTGTAACCATGGGATGTTTGCCTGTGAGCACATTCTACTTCTATGAGTCCTCATCATTCCTTTTCAGCCTCATGGATATTGACAATGAGATCAAGGATCCTGATCTCCTCATGGTGCCCTCCATTTGTCTGGGACAGCCTTTGGAGGAGACACCTGAAGGGACCGTCCATAGCTTCCTCAACGAGTTCATGTAGATGACACCTTGGCAGCAGAAAATCCAACCCCCTATCCAAGTGTAGCCTGCCAGAACCTTAGACTTTTCACATGCATGTTACAGGAcagtttaacaaatattgctaTGGGCAACTCCTTGcagctttttatatatatatctttgaGTAGACAATTGATAAGTCAGACTTTTAGCTTCTTATGAGTCATTTGTGCTGAAACAGGAAACCATGCATTTGGGGTAAAGACCATTCATTAGGGGCTTAACAAAACAAACGATATGGGAGCTTTTGTTGATTTGTTTGCATCAGATGATTTACTAATATAATTGGATGGTAATAATTTACTTATATTATAAGTTCGAGAAATGTGGTCAAATATATTAGAGTTATTATATTATGTGTGAGTGTacgtaaatatatttttgtgaagattatgtatgtgtatgtgtatatacatgtatgtttgaATGTCGATATATATCTGCATGGATTGTACATTAAAAAACACCAAATGGCATATAGTTACATGGGAGTGTTCCACAGTACTAAGGGTCAGGAAGggaagttaaaaaaattaaaaaattaaaataataatgacaatgacaataatTAATTACTGAGCTACGGAAAAGggattaaataaatgtatatgcctacttcttcctactccttttcagACATGTCTTGGTTGATGTTTCTTattgtttattaaatgttttgcttatttaa

Function

GO:

id name namespace
GO:0007160 cell-matrix adhesion biological_process
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778666.1 True 1405 mRNA 0.38 6 23969493 23971472

Neighbor

gene id symbol gene type direction distance location
stag2a LOC104919728 coding downstream 502 23949416 ~ 23968991 (-)
plp1b LOC103367237,LOC104919734,LOC102797282,LOC101464213 coding downstream 176266 23787760 ~ 23793227 (-)
LOC120543949 LOC104919735,LOC104954616 coding downstream 185088 23776565 ~ 23784405 (-)
cwc15 cwc15 coding downstream 194711 23772240 ~ 23774782 (-)
mtmr2 mtmr2 coding downstream 198265 23764241 ~ 23771228 (-)
LOC120544352 LOC104954468,LOC103363262,LOC104919726 coding upstream 14180 23985652 ~ 23996858 (-)
LOC120543934 dscaml1,LOC102792898,LOC103133989 coding upstream 43822 24015294 ~ 24071090 (-)
scn4bb scn4b,LOC104919755,LOC103363268,LOC100711422,LOC102215941,LOC101484402 coding upstream 102155 24073627 ~ 24086034 (-)
LOC120544451 NA coding upstream 118803 24090275 ~ 24097983 (-)
LOC120544243 LOC104919720,LOC101483357,LOC106516399,LOC100698794,LOC108247605,LOC107087895 coding upstream 144139 24115611 ~ 24122115 (-)
G168238 NA non-coding downstream 205354 23763547 ~ 23764139 (-)
G168161 NA non-coding downstream 363188 23605559 ~ 23606305 (-)
G168041 LOC103372846 non-coding downstream 644156 23323498 ~ 23325337 (-)
LOC120544733 NA non-coding downstream 735176 23164507 ~ 23234317 (-)
G168351 pafah1b2,LOC108247589 non-coding upstream 134110 24105582 ~ 24108489 (-)
G168365 NA non-coding upstream 202354 24173826 ~ 24174101 (-)
G168431 NA non-coding upstream 354959 24326431 ~ 24327158 (-)
G168452 LOC104945802,LOC106516412 non-coding upstream 358037 24329509 ~ 24330155 (-)
G168490 NA non-coding upstream 438561 24410033 ~ 24410302 (-)
thoc2 thoc2,LOC102794734 other downstream 20633 23920564 ~ 23948860 (-)
nlgn3b nlgn3b,LOC103367236,LOC101487455,LOC104954573 other downstream 157545 23796218 ~ 23811948 (-)
G168162 NA other downstream 351372 23617275 ~ 23618121 (-)
rnf167 rnf167,LOC102777964,LOC102289272,LOC101483611 other downstream 365601 23596899 ~ 23603892 (-)
mink1 mink1,LOC100692298,LOC102200963,LOC107746403 other downstream 483622 23450693 ~ 23485871 (-)
LOC120544713 LOC104954531 other upstream 3082 23974554 ~ 23976321 (-)
radx LOC103366308,LOC106923634,LOC103133962,LOC106955728 other upstream 424304 24395776 ~ 24405877 (-)
LOC120543987 NA other upstream 519088 24490560 ~ 24496582 (-)
LOC120544362 msi2,LOC103475888 other upstream 684331 24655803 ~ 24904853 (-)
pcdh1a LOC103357738,LOC108233889,LOC101479736,LOC102299879 other upstream 1652263 25623735 ~ 25723218 (-)

Expression


Co-expression Network