plp1b (LOC103367237,LOC104919734,LOC102797282,LOC101464213)


Basic Information

Item Value
gene id plp1b
gene name LOC103367237,LOC104919734,LOC102797282,LOC101464213
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23787760 ~ 23793227 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777380.1
ATTTTCTTCCATGGGAAACAATAAAGTAACCATAACCTTAAATTATCAGAATGTTATATTGCACTGAGATAGTTTATATGCACCTAAGGATTTCAAAATGTGTAGCGACAAAACTTTTGAGTGGAGTTGCTGTTGTTGGGAAGATATTCAAATTGCCTCTCTCGTTCATTATGCTTCTACCCACACTTGAACACTTGAACCCTGCCCCCGCCGGTATTGACACTCAGTGCCATGGTACCAGTCTTAGCCAGCTGTGGAGTGAGGATGGCCTGAGTAGTGGTATAGAGACGGTCCTGGTGACCCCTCTgccaccactgtgtgtgtgtgtgtaatgtggcACTATggtctttgtttgtttgacatCGCTGCCCTTTGTTCCTCCCTGATCATAGCAAAGACAATGGATATTGTATCTGCAGCCACAAAGAGAAGCTCTTTCTTCAGGCCCCTGAAGCCAGGGTTTCACCACTCTCTCCACCATCTCTCACTCGCCTGGTGACGCCTGTGACCGCTGGAGAAAGAGGGCAGGACCAGAGTTAGTAGGGGCTGAGCTGTGAGGTGTTGGTACCAGCAAAGAAACTGCCACATACAGATGAAGTCAGCGCTGGGACTTATTTTACCGTGGCAATAGCTTGTAGGCAGCACTGTATACATCACTGGTTGGCATTGGGATCTCTCTTGTTGTGGAGTACAGGATCAGAAGCAGCAAATGTTTCCGGTCAGGCAGCCTTGGCTTTGCAAAGCCTTAGGTTGCTATGATTGCTGTATCCGGTGCATTGGGGCAGTGCCCTACCCATCCCTGGTGGCCACCCTGCTGTTCTATGCTGGCGTGGCATTATTTTGTGGCTGTGGACATGAAGCGTTGTCCCAGACCGAAGTCCTCGTCGAGACTTACTTCGCCCGCAATGTTCAAGACTTTGTTGTCATGGCCTCCTTTATCAAATACTTCCAGTACGTGATCTATGGCCTGGCATCATTTTTCTTCCTCTATGGTATCCTGCTGCTGGCTGAGGGTTTCTACACCACAAGCGCTGTAAAGCAGACCTTTGGTGAATTCAGGAGCACCCAATGTGGCCGCTGCCTCAGCCTGACGTTTATCATAGTGACGTACATCTTGGCTTTCATCTGGCTGGCAGTGTTTGCCTTCACTGCTATCCCAGTCTTCTTCTTGTTCAACATGGAGCAGACCTGCCACAACATCAACATCCTGGCTGAAACAACCCCCAGCATTAATCAGCACGGCTGGATTTGCATGGACGCCAGACAGTATGGTCTGCTTCCTTGGAATGCAATGCCAGGCAAGGTTTGTGGATTGACCTTGGCATCTATTTGCAAAACCAGCGAATTCTACGTCACCTATGACTTGTACATAGCTGCATTTGCTGGTGCCGCCGTCACTCTCTTAGCACTGTTTTTGTATCTGGCAGCCACCACCTACAACTACGCAGTCTTGCGGTTCCTGGGCAGGAAAGGGGTCCGCTAAGTTCACCCAGTCAACCCCCATCCTCTGGCTATGAGATGGACAGTCAACACTAGACTTccattcatcctctgggaaacAGCAAACCTGGATCACCTGCTATATTATTTCTTTAGACCTAGATTCACACTCAGCAGCAAGCTCCAGCCTCCTCAACAAATCCTCCTCAGAGGATTCTCTTAGCTGTGTTGTTCATTTTCCTCTAGCAGGTTGCATctctcatgtttttctttttgtgaagCTTCATTGGTGCTGATGCTGTTGTCAGATTGTGATGCATGACATTTCATGAATAATTAAGAGCAATGACAGCTCGCCTCGCAAATCATAACTGCCTGCTCTCCATTCAGTGTTTACTGATGCATATTTTGGTTCTGAATATGATTTTGCTGCTGCCTCATTATCACCATCTTGTGTAGCAACATTGTGTGAACTAAAGCAAGGGAGGCTGAATGTACCAAAGTTCTCTGCATGGGTTAGGTGTATCCTCCCATCTCCCTTCGTGCTTTCACTTACAATACATGTACTTTGCATTCATTCataatgtattttgtttaaatgccacTGTGTAGGAGGGAAACAAAGACATGTATTCATTTTTCTGGATGTTAGGGGGTTACTGCTTAAAATGAGCTGTTTTATGTTACTGAGGTGTTAATGCTTCTATAACATGCAGCCAGGTGACTCATGTTTGATGTGTAGCCCTGCTACTTACTGAGCtgggttgtgttgtgtgtgctcaTTGTTAATTAAGGCTCATTAAACCAATTAAATCTGA
>XM_039777381.1
GATGTGGTCTATCTATTGTTGATGAGACAAAAGCGCGAGTCAGATTCATATAGGAGTGGCGGGGAATAACCTCTCATATCCTCATATCACAGTCACAAAGCCACCCAGCAAAACTTCAATAACCCCCTGCACTTCTTTCTGGACATGGGTTGCTATGATTGCTGTATCCGGTGCATTGGGGCAGTGCCCTACCCATCCCTGGTGGCCACCCTGCTGTTCTATGCTGGCGTGGCATTATTTTGTGGCTGTGGACATGAAGCGTTGTCCCAGACCGAAGTCCTCGTCGAGACTTACTTCGCCCGCAATGTTCAAGACTTTGTTGTCATGGCCTCCTTTATCAAATACTTCCAGTACGTGATCTATGGCCTGGCATCATTTTTCTTCCTCTATGGTATCCTGCTGCTGGCTGAGGGTTTCTACACCACAAGCGCTGTAAAGCAGACCTTTGGTGAATTCAGGAGCACCCAATGTGGCCGCTGCCTCAGCCTGACGTTTATCATAGTGACGTACATCTTGGCTTTCATCTGGCTGGCAGTGTTTGCCTTCACTGCTATCCCAGTCTTCTTCTTGTTCAACATGGAGCAGACCTGCCACAACATCAACATCCTGGCTGAAACAACCCCCAGCATTAATCAGCACGGCTGGATTTGCATGGACGCCAGACAGTATGGTCTGCTTCCTTGGAATGCAATGCCAGGCAAGGTTTGTGGATTGACCTTGGCATCTATTTGCAAAACCAGCGAATTCTACGTCACCTATGACTTGTACATAGCTGCATTTGCTGGTGCCGCCGTCACTCTCTTAGCACTGTTTTTGTATCTGGCAGCCACCACCTACAACTACGCAGTCTTGCGGTTCCTGGGCAGGAAAGGGGTCCGCTAAGTTCACCCAGTCAACCCCCATCCTCTGGCTATGAGATGGACAGTCAACACTAGACTTccattcatcctctgggaaacAGCAAACCTGGATCACCTGCTATATTATTTCTTTAGACCTAGATTCACACTCAGCAGCAAGCTCCAGCCTCCTCAACAAATCCTCCTCAGAGGATTCTCTTAGCTGTGTTGTTCATTTTCCTCTAGCAGGTTGCATctctcatgtttttctttttgtgaagCTTCATTGGTGCTGATGCTGTTGTCAGATTGTGATGCATGACATTTCATGAATAATTAAGAGCAATGACAGCTCGCCTCGCAAATCATAACTGCCTGCTCTCCATTCAGTGTTTACTGATGCATATTTTGGTTCTGAATATGATTTTGCTGCTGCCTCATTATCACCATCTTGTGTAGCAACATTGTGTGAACTAAAGCAAGGGAGGCTGAATGTACCAAAGTTCTCTGCATGGGTTAGGTGTATCCTCCCATCTCCCTTCGTGCTTTCACTTACAATACATGTACTTTGCATTCATTCataatgtattttgtttaaatgccacTGTGTAGGAGGGAAACAAAGACATGTATTCATTTTTCTGGATGTTAGGGGGTTACTGCTTAAAATGAGCTGTTTTATGTTACTGAGGTGTTAATGCTTCTATAACATGCAGCCAGGTGACTCATGTTTGATGTGTAGCCCTGCTACTTACTGAGCtgggttgtgttgtgtgtgctcaTTGTTAATTAAGGCTCATTAAACCAATTAAATCTGA

Function

NR:

description
PREDICTED: myelin proteolipid protein-like isoform X1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777380.1 True 2258 mRNA 0.46 7 23787760 23792097
XM_039777381.1 False 1657 mRNA 0.46 7 23787760 23793227

Neighbor

gene id symbol gene type direction distance location
LOC120543949 LOC104919735,LOC104954616 coding downstream 3355 23776565 ~ 23784405 (-)
cwc15 cwc15 coding downstream 12978 23772240 ~ 23774782 (-)
mtmr2 mtmr2 coding downstream 16532 23764241 ~ 23771228 (-)
fam76b fam76b coding downstream 25480 23756043 ~ 23762280 (-)
taf1 NA coding downstream 33029 23737071 ~ 23754731 (-)
stag2a LOC104919728 coding upstream 156189 23949416 ~ 23968991 (-)
LOC120544714 NA coding upstream 176266 23969493 ~ 23971472 (-)
LOC120544352 LOC104954468,LOC103363262,LOC104919726 coding upstream 192425 23985652 ~ 23996858 (-)
LOC120543934 dscaml1,LOC102792898,LOC103133989 coding upstream 222067 24015294 ~ 24071090 (-)
scn4bb scn4b,LOC104919755,LOC103363268,LOC100711422,LOC102215941,LOC101484402 coding upstream 280400 24073627 ~ 24086034 (-)
G168238 NA non-coding downstream 23621 23763547 ~ 23764139 (-)
G168161 NA non-coding downstream 181455 23605559 ~ 23606305 (-)
G168041 LOC103372846 non-coding downstream 462423 23323498 ~ 23325337 (-)
LOC120544733 NA non-coding downstream 553443 23164507 ~ 23234317 (-)
G168351 pafah1b2,LOC108247589 non-coding upstream 312355 24105582 ~ 24108489 (-)
G168365 NA non-coding upstream 380599 24173826 ~ 24174101 (-)
G168431 NA non-coding upstream 533204 24326431 ~ 24327158 (-)
G168452 LOC104945802,LOC106516412 non-coding upstream 536282 24329509 ~ 24330155 (-)
G168490 NA non-coding upstream 616806 24410033 ~ 24410302 (-)
G168162 NA other downstream 169639 23617275 ~ 23618121 (-)
rnf167 rnf167,LOC102777964,LOC102289272,LOC101483611 other downstream 183868 23596899 ~ 23603892 (-)
mink1 mink1,LOC100692298,LOC102200963,LOC107746403 other downstream 301889 23450693 ~ 23485871 (-)
slc12a9 slc12a9,LOC103370084 other downstream 349832 23426788 ~ 23437928 (-)
LOC120543557 NA other downstream 634351 23150844 ~ 23153409 (-)
nlgn3b nlgn3b,LOC103367236,LOC101487455,LOC104954573 other upstream 2991 23796218 ~ 23811948 (-)
thoc2 thoc2,LOC102794734 other upstream 127337 23920564 ~ 23948860 (-)
LOC120544713 LOC104954531 other upstream 181327 23974554 ~ 23976321 (-)
radx LOC103366308,LOC106923634,LOC103133962,LOC106955728 other upstream 602549 24395776 ~ 24405877 (-)
LOC120543987 NA other upstream 697333 24490560 ~ 24496582 (-)

Expression


Co-expression Network