fam76b (fam76b)


Basic Information

Item Value
gene id fam76b
gene name fam76b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23756043 ~ 23762280 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777531.1
AGCCGTCGACCACTTCCGGTTACATGACGACGACGGCGTTGATACAAAAAGAGCGAAGGAAAACAGGAAAATACCTTTCTTGGCGAGAAGAGCGGAAACTTAATATAAATAGCCAGATCTATGTTAACGGGTTGCTTTTATGAAGGCATAACTAACTATTTATCTCAAGTTATTATGGTTGGATAACGTATGAGCAGTGAAAGATCACAGATATTTGGAGTTTATTGTTCTTCGCCTGCTCCCTCCAGCTAGCGTTAAGCTATTACTGTGTTGCCCTACGCTAACGTTACCTAGCcgagctagctaacgtcagctaacaCTGGAacctatttgtgtgtgttcttagTTCTGAATTAGCAAACAGCTAGAAAGGAAATAGTGCCGTCAATCCGTTCAGTTTGCAGCTGGACTCTGCTAACCTCTCCTTGCTCGGTGACATTAGTTGGGCGAGAATGGCAACATCGGCTCTGTACGCCTGTACGAAGTGTAACCAGCGGTACCCCTTCGAGGAGTTATCGCAGGGCCAGCAGCTGTGCAAGGAGTGTCGCATCGCACATCCAATAGTGAAGTGCACGTACTGCAGATCTGAGTTTCAGCAGGAAAGtaaaaccaatACAATCTGCAAGAAGTGTGCTCAGAATGTCAAACAGTTTGGAACACCCAAACCCTGCCAGTACTGTAACATCATTGCAGCTTTTATTGGGACAAAATGCCAGCGTTGTACTAACTCAGAGAAGAAATATGGACCTCCACAGACATGTGAGCAGTGCAAACAGCAATGTGCTTTTGATCGTAAGGAGGAAGGCAGGAGAAAGGTGGATGGGAAACTGCTCTGCTGGCTCTGTACCCTGTCCTACCGCCGTGTCCTGCAGAAGACCAAGGAGCAGAGGAAGGGCTTCGGCTCCTCCAACTCCTCCTCTCTGAACGAGAAAGACCACCACTCCAGACCTCACCATCATCACCaccaacacagacacagcagcTCTAATCACAAACTAAGTGGGAGCTTGAGTCCTGAGCAGGAGCAGGGACTGTGGAAGCAGAGCCATAAATCGTCTTCAATCCAGAAGGAGACTCCAAAGAAGAAACCAAAACTGGAGATGAAGCCATCCAATGGGGACAGTAGTTCCATCACCCAGTCGATGGATTCTGGAGGAACAGACAACTTCATTCTTATCAGCCAgctgaaagaggaagtgatgtcactgaAGAGACTTCTGCAGCAAAGGGATCAAACCATTCTCGAGAAGGACCGAAAGCTCACAGAGCTCAAAGCAGACTTTCAGTACCAGGAATCCAACATGAGAGTTAAGATGAACCAAATGGAGAAAGCACACAAAGAGTCTATGGAGCAACAGCAGgGCAAGAACAGGGAGTTGATGAAACAAGTGGCTGCCCTCTCTAAAGGAAAAAAGTTTGACCGGACAGGAAGTTCACTGCTGTTGCCCTAACAATAGGCCGGCCAACGGGTAACAACACAGTGGCTTCATTGTTGTAACACTGTGAAAGTCTCCCTCCTGTGTTTCCTCATTGCCATCAACATCAATTACTTCTCAATTGGTAACGTTAGAGACCATGTTGTACATGGAAATCAATTGTTGAATCAAAGACACCTTTCTCTAAATGTCAGCatattttagatattttatGGTGACTTTTCCACTGGTTCATAGGATGTGACTTTAAAAGGAGTGGAGGATGGAGCCCTCATTTTTAACACTGCCGGGCCAAAACAAAAAGCATGGTGTGCATATGTGGATTGCATTCTGTCAACTTAATGTATCCACCTAATTTTTATGGATGTcatgcaatttatttattcaacTGTATTTCTTAGCTTTTTTATTTCCTCACAACATACTAAGAGAATATCCCACATTTTGGGGTTTTCTTCAATAGCAATTAGTTATATTTTTCTAAATTTATGTGATTGTGGAAGACAAGTTCTCCTTAATGGAGATCCTGCGCAACTTTACAATGTATGCAAATGTGGGAAGGGTGACCACTGAGCTACTGCTCAACAGTAGACCACCCACTCAGTAACAATTCATACAACAACCAATGAACACTTTAAAAGGCTGTCTGACAGAGAGACACCTCTTGGCTGCCCTCTTTCTCACTGTGTGACAGCTGTAGTGCTTTGCTGTTTCTCTTTAGTGGAACGATTGTAATACTGCATGATTTTACTGCCAGACACCGGTTGGCATTGTGGTCGGACTTCTTCTTTTCCCTCcctttttaattagttttttaagAATCACTTGTAAATGTATTACTGGGGTCAGCCAATTGTATTTAAACTATTGCTTGTATCTGTTTTAGtgagtacagtatgtgtatggtAAGGCCAGTTGAAATTAACATGTCTGTAGAAGATgctttttaaaggaacacacctaTCACCTTGCATTATTGGGCTGGTTTCATACTGTGGCGTCCAGGAtcacttttgtactttttttccaAACCAAGTGttttaaaactattaaaacTGGCTAAACtgtta

Function

symbol description
fam76b Predicted to be located in nuclear speck. Orthologous to human FAM76B (family with sequence similarity 76 member B).

NR:

description
protein FAM76B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777531.1 True 2506 mRNA 0.43 10 23756043 23762280

Neighbor

gene id symbol gene type direction distance location
taf1 NA coding downstream 1312 23737071 ~ 23754731 (-)
slc6a7 slc6a7,LOC104954653,LOC103367243,LOC104919741 coding downstream 27482 23718767 ~ 23728561 (-)
rb1 rb1 coding downstream 38165 23697334 ~ 23717878 (-)
LOC120544653 LOC103367248,LOC104954773,LOC105929335 coding downstream 59817 23686225 ~ 23696226 (-)
rnf121 rnf121,LOC100694640 coding downstream 76795 23667325 ~ 23679248 (-)
mtmr2 mtmr2 coding upstream 1961 23764241 ~ 23771228 (-)
cwc15 cwc15 coding upstream 9960 23772240 ~ 23774782 (-)
LOC120543949 LOC104919735,LOC104954616 coding upstream 14285 23776565 ~ 23784405 (-)
plp1b LOC103367237,LOC104919734,LOC102797282,LOC101464213 coding upstream 25480 23787760 ~ 23793227 (-)
stag2a LOC104919728 coding upstream 187136 23949416 ~ 23968991 (-)
G168161 NA non-coding downstream 149738 23605559 ~ 23606305 (-)
G168041 LOC103372846 non-coding downstream 430706 23323498 ~ 23325337 (-)
LOC120544733 NA non-coding downstream 521726 23164507 ~ 23234317 (-)
G167987 NA non-coding downstream 574571 23181118 ~ 23181472 (-)
G167970 NA non-coding downstream 606638 23148941 ~ 23149405 (-)
G168238 NA non-coding upstream 1267 23763547 ~ 23764139 (-)
G168351 pafah1b2,LOC108247589 non-coding upstream 343302 24105582 ~ 24108489 (-)
G168365 NA non-coding upstream 411546 24173826 ~ 24174101 (-)
G168431 NA non-coding upstream 564151 24326431 ~ 24327158 (-)
G168452 LOC104945802,LOC106516412 non-coding upstream 567229 24329509 ~ 24330155 (-)
G168162 NA other downstream 137922 23617275 ~ 23618121 (-)
rnf167 rnf167,LOC102777964,LOC102289272,LOC101483611 other downstream 152151 23596899 ~ 23603892 (-)
mink1 mink1,LOC100692298,LOC102200963,LOC107746403 other downstream 270172 23450693 ~ 23485871 (-)
slc12a9 slc12a9,LOC103370084 other downstream 318115 23426788 ~ 23437928 (-)
LOC120543557 NA other downstream 602634 23150844 ~ 23153409 (-)
nlgn3b nlgn3b,LOC103367236,LOC101487455,LOC104954573 other upstream 33938 23796218 ~ 23811948 (-)
thoc2 thoc2,LOC102794734 other upstream 158284 23920564 ~ 23948860 (-)
LOC120544713 LOC104954531 other upstream 212274 23974554 ~ 23976321 (-)
radx LOC103366308,LOC106923634,LOC103133962,LOC106955728 other upstream 633496 24395776 ~ 24405877 (-)
LOC120543987 NA other upstream 728280 24490560 ~ 24496582 (-)

Expression


Co-expression Network