notch1a (LOC104924495,LOC103357999)


Basic Information

Item Value
gene id notch1a
gene name LOC104924495,LOC103357999
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23789882 ~ 23813730 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780131.1
GGAAAGCACCAGGTTAACATCTATGAACTAACTCCTCTTGCAGACCTTTCCTCTCTCACTGTTGgatttacctttttttccacaaGGATATTTATTTCAAGCAAACACCTGGAGTGTCCCAAACTGTGGATCTATGCGAACCCTACGTGGGAGTCAACGGCATTTGTGAAGTTGAACAGGAGGAATGTATCGTTTCTTTGTGAAACTAACATTTCTGATTCCTGCAATCGTCATCTCACAAGGTCTAAAATGCTCCCTGCCTACTGAATCATGCCTGAATGGAGGAAGATGTGAAGCCACCTCTAATGGAAATGGAGAATGCAAGTGTCCCAATGACTACGTAGGCAATCGTTGCCAGTATCCAAGCCCCTGCAGCCCTTCACCCTGCCGCAACGGTGGTGAATGCCGCGCTGTTTCCCATGGCAACACGTTTGATTTCCGCTGCGTGTGCCGCCTGGGTTTCATAGACCGGCTTTGCCTGACCCCCACCAACCATGCCTGCATGAGCTCCCCCTGTCGCAATGGAGGAACTTGTGATCTCATTACCCTCAACGCCTTCCGCTGCCGCTGCCCACCTGGGTGGTCAGGTAAAACCTGCCAGCTTGCCAACCCATGCGCGTCCAATCCATGCGCAAACGGTGGCCAGTGCTCAGCCTTCGAATCCACGTACATCTGCACCTGCCCACCCGCCTTCCACGGTCAAACTTGCAAGCAAGACGTCAACGAGTGCGCCCagactccctctctctgtcttaatggtggtgtgtgtgtgaacgagGTGGGCTCATACAACTGCCGCTGTCCTCATGAGTACACTGGTCAACACTGTGAGACACCCTACATGCCATGCAGCCCTTCACCATGCCAAAATGGAGGCACCTGTGTGCAGAAGGGAGACACCACCTATGATTGCAGCTGCCTTCCAgGCTTCACAGGTCAGCACTGTGAGCATAACATCGATGACTGTCCCGGCCACAACTGCCAGAATGGTGGTATGTGTGTGGATGGTGTGAACACCTACAACTGCCGGTGCCCACCTCATTACACAGGTCAATACTGCACAGAAAATGTGGACGAGTGTGAGTTGATGCCCAACGCATGCCAGAATGGAGGGACGTGCCATGACACTCACGGCAGCTACCACTGCGTCTGCGTCAACGGATGGACCGGTGACGACTGCAGCGAGAACATTGACGACTGCGCCAGCGCGGCTTGTTACCACGGCGCTACCTGCCACGACCGCGTAGCCTCCTTTTTCTGCGAGTGTCCTCATGGGCGCACAGGTTTGCTGTGCCACCTTGATGACGCCTGCATCAGCAATCCGTGTCAAAAAGGTTCCAACTGTGACACCAACCCAGTCAACGGCATGGCGATCTGCACCTGTCCCCCAGGTTATACTGGGTCAGCCTGCAACCTGGACATTGACGAATGCTCCCTCGGTGCCAACCCTTGTGAACACGGTGGCCGCTGCCTCAACACCAAAGGCTCTTTCCAGTGCAAGTGTCTTCAAGGATATGAAGGACCTCGTTGCGAGATGGATGTCAATGAATGCATGTCTAATCCTTGCCACAATGACGCCACCTGCCTGGATCAGATTGGAGGGTTTCACTGCATTTGTATGCCAGGATATGAGGGTGTGTTCTGCCACATGAACACAGATGAGTGTGCCAGCCAACCTTGTCTCAACAATGGCAAGTGCATCGACAAAATCAACTCCTTCCACTGCGAGTGCTCAAAAGGTTTTTCGGGGAGTCTGTGTCAGGTGGACATTGACGAGTGTGCCAGCACCCCCTGCAAGAATGGAGCTAAATGTACCGATGGTCCCAACAAGTACACCTGCGAATGTGCTGAAGGTTACACAGGACAGCACTGTGAGACTGACATCAATGAGTGCTACTCTGACCCCTGCCACTATGGCACCTGCAAGGATGGTCTAGCCTCCTTCACCTGCTACTGCCGCCCCGGCTACACTGGCCGCTTGTGTGAGACTAACATCAATGAGTGTCTTAGCCAGCCCTGCAAGAACGGTGGCACTTGCCAGGACAGGGAAAACACATATATTTGTGCTTGCCCTAAAGGCACTGCAGGTTTCAATTGTGAGGTGAACCTGGACGACTGTAAGAGCAAACCCTGCGACTACGGGAGGTGCATCGACAAAATCAACGGCTACGAGTGTGCATGTGAGCCTGGCTACACAGGATCAATGTGTAACATTAACATTGATGAGTGTGCCATAAACCCCTGTCACAACGGGGGTACATGCATCGATGGCATCAACAGCTTTACCTGCCTGTGCCCAGAGGGCTACAACGACGCCACCTGTTTATCTCAGGTGGATGAGTGTGGCAGCAACCCCTGCATCCATGGCCGTTGCCAGGACCTCATCAATGGCTACAAATGTACCTGTGACTCCGGCTGGAGCGGCCCCAACTGTGACATCAATAATAACGAGTGTGAGTCCAACCCGTGCATGAATGGGGGAACCTGCAAGGACATGACCAGCGGATACCACTGCACATGCAGAGCCGGATTTACTGGACCTAACTGCCAAACTAACATCAACGAGTGTGCCTCCAACCCCTGCCTCAACCAGGGTACCTGCATCGATGATGTGGCTGGATACAAGTGCAACTGTTTGCTGCCTTACACTGGTGAAAATTGTGAGATCCTGCTGGCGCCCTGCAGCCCCAGACCCTGTAAAAATGGTGGAGTGTGTAAGGAGGCTGAAGACTACCAGAGCTTCTCCTGCATCTGCCCTGAAGGATGGCAAGGTCAAACTTGTGAGATCGATATCAACGAATGTGTGAAGAACCCATGTCGCAATGGTGCTATATGCCAAAACACTATGGGTGGCTACCAGTGCAAGTGTCAACCAGGTTACACTGGCCAGAAGTGTGAGACCGACACCGATGACTGCAAACCAAATCCCTGCAGTAACGGTGGTCTGTGCCGCGATAGCATCGACACTTTCACGTGTACCTGTCTGCCCGGGTTTCGTGGCAGCAGATGCGAGCAGGACATTAATGAGTGTGAGAGTAACCCATGTAGGAATGGCGCCAATTGCACCGATTGTGTCAACAGCTACACCTGCACCTGCCCGCCTGGCTTCAGTGGCATCAACTGTGAGATCAACACCAATGACTGCACCGACAGCTCTTGCTTCAATGGTGGCACTTGTGTGGATGGAATTAATGCGTTCACCTGCCTGTGTCTACCTGGATTCACTGGCAGCTACTGCCAATATGATATCAATGAGTGTGACTCCAAACCGTGTCTCAATGGAGGATCTTGTCTTGACAGTTATGGGACGTACAAGTGTACCTGTCCTCATGGCTACACAGGAGTCAATTGTCAGAatcttgtgcgctggtgtgatTCATCCCCCTGTAAAAATAGAGGTTCGTGCTGGCAACAGGGAGCCTCTTACACCTGCCAGTGTCAGACTGGATGGACTGGTCTCTATTGTGACATCCCCAGTGTTTCCTGTGAGGTCGCAGCCCAACAGCAAGGGGTGGAGGTGGTTCACCTGTGCAGGAACTCAGGCCAGTGTCTGGATGCTGGGAGCACACATTACTGCCGATGCCAGGCCGGCTACACCGGGAGTTACTGCCAGGAACAAGTGGACGAGTGCTCACCCAATCCTTGCCAGAACGGAGCCGCCTGTACTGATTATCTGGGTGGCTACAGCTGTGAGTGTGTCCCTGGCTACCACGGTGTAAACTGCTCCAAAGAGATCAATGAATGTCAGTCACAGCCCTGTCAGAATGGAGGCACATGCATCGACCTCATCAACACATATAAGTGCTCCTGTCCCAGAGGAACACAAGGTGTCCACTGTGAGATTAATTTGGATGACTGCATCCCCTCCAGCGACCCACTAACCAACGAGCCAAAGTGCTTCAACAACGGCAAGTGTGTAGACCGCATTGGAAGTtaccagtgtgtgtgtccagcaggCTACGTAGGAGAGCGCTGTGAAGGTGACGTCAACGAGTGTTTGTCAGACCCCTGTGACCCCAGAGGGTCCTACAACTGCATTCAGCTCACCAACAGCTACCGTTGCGAATGCCGCACTGGATATACAGGTCAACGTTGTGACAAAGTGTTTGATGGCTGTAAAGGAAGACCCTGCAGAAACGGAGGATCGTGTGCTGTTGCTAGTAACACACCTCATGGTTTCATCTGCAAATGTCCACCTGGCTTCACCGGCTCTTCTTGCGAGTATGATTCTCGCTCTTGCGGGAGTCTGAATTGCAGGAATGGAGGTACATGTGTGTCAGGCCACCTAGGCCCACGCTGCCTGTGTCCACCAACCTTCACTGGGCCTGAGTGCCAGACCCCCACTGACAGCCTCTGCATCTCCAACCCCTGCTACAACGGTGGCACGTGCCAGATCACCCCAGACGTGCCTTTCTTCCAGTGCAGCTGCCCCAGCAATTTCAACGGCCTGCTGTGCCACATCCTGGACTATTCGTTTGTTGGAGGTTTTGGCGGGGACATCACCCCGCCTCCGGAAGTGGAGGTGAGCTGCGAGATTCCTCAGTGTGACGAGTGGGCGGGCAACCATATCTGCGACTCGCTGTGCAACAACCATGCCTGTGGCTGGGATGGAGGAGACTGCTCACTTAATTTTGATGACCCGTGGCAAAACTGCTCTGCGGCCTTGCAGTGCTGGCGCTACTTTAACGATGGGAAGTGTGATGGCCAGTGCAACAGCCCTGGGTGTCTCTATGATGGCTTTGATTGTCAGGGACAGGAAGGACAATGCAATCCGCTGTATGACCAGTACTGTAAAGACCACTATGCCGACGGTCACTGTGACCAGGGCTGCAACAATGCCGAATGTGAATGGGATGGCCTGGACTGCGCCAACAACATGCCAGAGAAGCTGGCAGACGGGCACTTAGTTCTGGTGGTCCATATCCCCCCCGAACAGCTTAAAAATCGTTCTTCAGCCTTCCTCAGAGAGCTCAGCAGTGTTCTCCACACCAATGTGGTGTTCCGCCGTGACGCCAAAGGAGAACCAATGATCTTCCCTTACTATGGCAACGAACAGGACCTCGTTAAACATAACGTGCTGAAGCGCTCCACAGATGGTTGGCCCGAGTGGGCTTCAATGCCAGCCAATGTTTTGGATCAAGTGAAGGAAAGCGTGTCTGCCATGGTTAGCCCTCGAAAACGCAGAGAGCTCGATCCTGTGCAAGTCAAAGGGTCTGTGGTGTACCTGGAGATTGACAACCGTCAGTGTTACCAGCAGTCTAGTGAATGCTTCCAGAGCGCCACAGATGTAGCTGCGTTCCTTGGAGCACTGGCCACCAGCGGGAATCTCAATGTTCCCTATATTGAAGCTGTCACCAGTGTGAGACCTACTCCCTCCAGTTCAGAGCTCTACCCCATGTACATAGTCTTCTTCGGCTTGGCTGCTTTGGGTTTCATCTGCCTTGGTGTTCTGGTGTCCCGTAAGAGGCGACGAGAGCACGGCCAGCTCTGGTTTCCTGAGGGATTCAAAACGTCGGAGCCCAGCAAAAAGAAACGCAGAGAGCCACTGGGAGAGGATTCTGTTGGATTGAGGCCCATGAAAAACTCAGACATCAATCTTATGGATGAcaatcaaaatgaatgggatgaTGAGGATCCAGACTGCAGGCGCTTCAGGTTTGAGGAGCAGGCCATGTTGGATTTAAGTGACCGTACTGACCACAGGAAATGGACACAGCAGCATCTGGATGCAGCTGACCTGCGTATTGCGTCCATTGCTCCTACCCCTCCTCAGGGAGAGATAGAGAATGACTGCATGGATGTGAATGTCAGAGGACCAGATGGTTTCACTCCCCTGATGATCGCCTCCTGCAGCGGTGGAGGACTGGAGACTGGTACCAGTGAAGAGGAAGAGGATCCCTCAGCAGAAATTATCTCTGACTTCATTTACCAAGGCGCCAACCTCCACAACCAGACTGACCGCACAGGCGAGACTGCCCTCCACCTGGCGGCTCGCTACGCCCGCTCTGATGCTGCCAAACGCCTCCTGGAGTCCAGCGCCGATGCCAACGTTCAGGACAACATGGGCCGCACTCCGCTTCACGCTGCTGTGGCTGCAGATGCACAGGGAGTGTTCCAGATTTTAATCCGAAACCGCGCCACTGATCTTGACGCCCGCATGCACGACGGAACAACACCGCTGATTCTAGCAGCCCGATTGGCGGTTGAGGGCATGGTGGAAGAGCTTATCAACTGCCACGCTGATGCTAACGCCACCGATGATTCTGGTAAATCTGCTCTTCACTGGGCCGCGGCTGTAAACAATGTGGAGGCAGCAATGGTGCTGCTAAAAAATGGTGCCAACAAAGACATGCAAGATAACAAGgaggaaACACCAATCTTCCTTGCAGCCCGTGAAGGCAGTTTTGAGACAGCTAAGGTTCTTCTGGAACACTTTGCCAATCGTGAGATCACCGACCATCTTGACCAGCTGCCCAGAGATATTGCCCAGGAACGCATGCACTATGACATCGTCCGCCTTCTGGATGAGTACAATTTGGTTAGGAGTCCCGGGCTTCACAGCGGCCCCCTAAGCACCTCAAGCCTATCCCCACCTCTCTGCTCCCCCAATGACTACCTTAGCAACCTCAAGCCCACCCTGTCTGTCAAAAAGGTTCGAAAACTTAGCGCCGGTGGAAAAGGAGGGAAGGATGGGGGCAAAGATAAtagaatgaagaagaaaaagtcGCTGGATGGGAAGGGCAACTTGCTGGACACGTCAGCTGTCCTCTCCCCGGTTGATTCCCTTGAGTCTCCGCATGGCTACCTGTCTGATGTGGCCTCTCCTCCCATGACGTCACCCTTCCAGCAGTCCCCACCTATGTCTCTAAATCACCTACAAGGCAATGGAGACCACATGGGCCAGATGAGCATGGGTAAGGATATGGGCTGTATGTCTTTTGACCCTCACCCACTCCGTCTCTCCCACATGCCTGTGTCCAGCCCCAGTAGTCAGGGCACAACATCCATAGGTGGCAACAGAGGAGGCCAGGTTGACTGGATCTCCAGGATGCACCCAGGTGTCGGCCAGCAAGGAGGCTTTACCCAGGCACCACCAATATCCCACAACATGATGGGTGCTCTGCATGGCGTCAGCACTGCCACTCTGTCTCAGATCATGGGCTACCAGAATCTGCAGACCAGCCACCTCGGCTCTGCACACATGATGCAGCAGGCTCACTCGCGGCAGCTCCAGCACCAAAACTCCAACTCCACCACAGCTGGCCAGTCCCTCAACCAGAGCTTCCCAAACGTTGAGCTGAACGGCTCcgacatgcagcaaaacaaCGGCCACTCTATGCCAATCCACACCGTAATGCCCCAGGAGACGCAGATCCTTGGCAACCAATTTCTCACCCCTCCCTCCCAGCACAGCTACTCTAGCCCCATGGACAACACACCTAACCACCAGCTACAGGTGCCTGACCACCCGTTTCTAACTCCCTCCCCCGGCTCCCCTGACCAATGGTCCAGCTCGTCCCCACATTCCAACATGTCCGATTGGTCGGAAGGCATCTCCAGCCCGCCTACAAGTATCCATTCACAGATGAATCTGATTCCAGACCAGTTTAAGTAGAGACTTGTAAAATGGACAAAACCTTTTAGTGGAAAAAAGATATATACAAATTTCATACAGAAAGAGAGTGACAAACCTGTCTCAAGACTAAAGATGCTCCTTTTATATTATCTGTTTTTATACTAACGATAAGAACCGTTTTAgtcattttgtatttatttatgtacttTTTTTGACCTGAACTATAAAGAAGATgcttttatatttatgtttttttttattttttggttctGTTATGTATGGGAAGATTAGAAACTGTTTAAAAGGAGTGTATATGGGAACAAAAAACTCCAAGATGTGTACACTGGCTATTTATTTGTGTCTTGTGTTGCTATATTCACTGGatttattttaatcttttgGTCTttacaaatttttatttttgggatTTGCATTGCATTATGCTtgtacagattttttttcaacttttatagattattttaaaaattttcagtattaattaattatatttttaaccTCCTTTGTCTTTTTAAATGACAGGTTTTGTTACTGAACTACATTTCACTAAGTCTTATCACTGAGTCTGTTAGATGATGatcaaatacatatatatatgaagtGTCACCTTTCATGATGTTACCTGCTATACTGTCTTTTGTGTCAAACTAATAGAGAGAGTAACTAAGAGGTAACAGAGACCTTAAAGCACAGAACAAATATCCCTTATGAGTTGAGAGATTCTTTTCAAAATGAGTGGAAAATGCATCTAAATTAACCTGAACCTATTTTTTATTGAATAATGGTCTTGGCCGGTGCTGAGTAATTGATTTGtcattactttattttattttatcccaAATCAGGGATTATGGTTACCATGTTTAACCTTTCAAGTGTTAAATTGCAGACCTGTTGTAGAAAAGTTGAAATGTTACATTCACCACAGTTTAAAATAGTGccagtgtgatttttgtttttcctaagaaaaaaaaacatatttgtgaGATTTCttgtaaaaaacaatgtcttTGAGGTGGAAGACATAGCATTGTTTGTGAAAGAAATGGGgacctttgtttgtgtgtttaacgACATTGCCTGCACTTTGTGTGGTTTAAGGTGTctaaatgtcatgttttataaACTAATTCAGAGATAAAAGATGTTTTTAAGAAAAGATGTAATTCAAAATCAACGTTCATGCAAAGTTGTAGTTTGCAAAGAAGTATCTCctgattaaaaatgttttgtaaaaatggTCTTGATTCAATAAAAGCTGCTGTTAAGCATTAA

Function

NR:

description
PREDICTED: neurogenic locus notch homolog protein 1 isoform X1

GO: NA

KEGG:

id description
K02599 NOTCH1; Notch 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780131.1 True 8869 mRNA 0.50 34 23789882 23813730

Neighbor

gene id symbol gene type direction distance location
LOC120545180 LOC103357997,LOC101480866,LOC102079280,LOC106633087,LOC102787376,LOC102204442 coding upstream 32577 23754735 ~ 23757305 (+)
pdcl NA coding upstream 42490 23730918 ~ 23747392 (+)
rnf165a rnf165,LOC103473450,LOC102207811,LOC100695851 coding upstream 127677 23651723 ~ 23662205 (+)
c17h18orf25 clg7h18orf25,LOC102291905,LOC103357989,LOC101477080 coding upstream 143663 23638215 ~ 23646219 (+)
hwa NA coding upstream 158710 23628344 ~ 23631172 (+)
LOC120545788 NA coding downstream 1591 23815321 ~ 23840033 (+)
LOC120545057 LOC104952880,LOC103371326 coding downstream 75174 23888904 ~ 23889986 (+)
col27a1a LOC104924507,LOC103371324 coding downstream 176065 23989795 ~ 24063047 (+)
cdk5rap2 cdk5rap2 coding downstream 251212 24064942 ~ 24110814 (+)
dolk dolk coding downstream 315180 24128910 ~ 24131539 (+)
G177284 NA non-coding upstream 70509 23673262 ~ 23719373 (+)
G177244 NA non-coding upstream 253484 23535883 ~ 23536398 (+)
G177177 NA non-coding upstream 362980 23424844 ~ 23426902 (+)
LOC120545237 NA non-coding upstream 442489 23336307 ~ 23347393 (+)
G177170 golph3,LOC103364537,LOC106962713 non-coding upstream 454305 23331898 ~ 23335577 (+)
LOC120545825 NA non-coding downstream 121117 23934847 ~ 23935801 (+)
LOC120545826 NA non-coding downstream 122271 23936001 ~ 23936681 (+)
LOC120545017 NA non-coding downstream 155527 23969257 ~ 23971641 (+)
G177452 NA non-coding downstream 325688 24139418 ~ 24150168 (+)
G177487 NA non-coding downstream 586755 24400485 ~ 24400891 (+)
rpl37 rpl37 other upstream 62640 23723478 ~ 23727242 (+)
LOC120546141 NA other upstream 63830 23725974 ~ 23726052 (+)
LOC120546142 NA other upstream 65637 23724166 ~ 23724245 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other upstream 331277 23440983 ~ 23458605 (+)
G177094 NA other upstream 605620 23182673 ~ 23184262 (+)
dnlz dnlz,LOC104941974 other downstream 341655 24155385 ~ 24157621 (+)
G177596 map1b other downstream 889241 24702971 ~ 24711641 (+)
zgc:63972 cuta,LOC103373665 other downstream 1431832 25245562 ~ 25305032 (+)
G177715 NA other downstream 1719402 25533132 ~ 25533689 (+)
G177759 NA other downstream 2015988 25829718 ~ 25849122 (+)

Expression


Co-expression Network