il17a/f3


Basic Information

Item Value
gene id il17a/f3
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 9595376 ~ 9602348 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248252
GTAGagttgagcagGGAGAATGTGGAGATAACACAACAGACAGCAGAGGAGCACTTCACTGGCAGAGCTGTTCTCTGTAGGCGACAACCATGCTGCTGGGTTTGAGAGCTTTGTTGGTGCTGGGTCTGGTCACGCTGTTGCATGCCACCAGGAAAGGCAATGCGGTGTCCCTGAAGTTGGGTCACGGAAGCAGACTGAAGGGCCAGACGGTGAGGCTGGTCCTGGATCCGTCGATGCAGCCTCAGATTGCCAGCACGTCGGCCTCGACCATCGCCAACATGTCTCTGTCACCGTGGACGTACAGACTCCTGTGAGGAATCTCGGTTGCCTCGGCGGATCTCTCATGCTAAGTGTCTGACCTCTGGCTGTCTGAGCCTgcagggggggggagaggaTGCAGGCCTGGAGGCCAAACCTATCTACTACCAGGTCCTGGTCCTCCACAGAGTCCCAAGGAAAAGGTACAGTAAGAAAGcagggaggatgaggatgaaccAATACGACTTCAGACTGGGGACGGAGGTGATCTCGGTGGGCTGTACCTGTGTGAGGCCCAGCGTCGTACCACAGCACTAGAGACTTCTCATGTTGGCAACTCCTTCagcatattgtacattttatatcACTTTCTAACTTAAACTTGTATTAAGCAATATTTTTTAAGTTATCACGGAATCATGTGACTGTGCAATGTATTTCACAAAGACGCATACATGAATATCTCTGTGCCACTCTCTATGTATGTCTGAGACCGGGTCTTTGTGTTAGCCAATCGAACTTCATACAATGAACTGCAAAGAGCTGTGTTTCTTTCTGCCCCCTAGTGGTGAAAAAAATGCTCAATGCAGCTTTAACCTGAGTGTACAATGTCTGGCAAACACATTTAATGTATGTCATTTTCTTATGTGTCATGAAAGGGGTGTTGTTGGAAATATTTATTTCTATACATATTTGTGGTGGgtaatg
>XM_039781120.1
AAAGCTTGCCTGCATATAAACACAGGGAGAATGTGGAGATAACACAACAGACAGCAGAGGAGCACTTCACTGGCAGAGCTGTTCTCTGTAGGCGACAACCATGCTGCTGGGTTTGAGAGCTTTGTTGGTGCTGGGTCTGGTCACGCTGTTGCATGCCACCAGGAAAGGCAATGCGGTGTCCCTGAAGTTGGGTCACGGAAGCAGACTGAAGGGCCAGACGGTGAGGCTGGTCCTGGATCCGTCGATGCAGCCTCAGATTGCCAGCACGTCGGCCTCGACCATCGCCAACATGTCTCTGTCACCGTGGACGTACAGAGACTCCTGTGAGGAATCTCGGTTGCCTCGGCGGATCTCTCATGCTAAGTGTCTGACCTCTGGCTGTCTGAGCCTgcagggggggggagaggaTGCAGGCCTGGAGGCCAAACCTATCTACTACCAGGTCCTGGTCCTCCACAGAGTCCCAAGGAAAAGGTACAGTAAGAAAGcagggaggatgaggatgaaccAATACGACTTCAGACTGGGGACGGAGGTGATCTCGGTGGGCTGTACCTGTGTGAGGCCCAGCGTCGTACCACAGCACTAGAGACTTCTCATGTTGGCAACTCCTTCagcatattgtacattttatatcACTTTCTAACTTAAACTTGTATTAAGCAATATTTTTTAAGTTATCACGGAATCATGTGACTGTGCAATGTATTTCACAAAGACGCATACATGAATATCTCTGTGCCACTCTCTATGTATGTCTGAGACCGGGTCTTTGTGTTAGCCAATCGAACTTCATACAATGAACTGCAAAGAGCTGTGTTTCTTTCTGCCCCCTAGTGGTGAAAAAAATGCTCAATGCAGCTTTAACCTGAGTGTACAATGTCTGGCAAACACATTTAATGTATGTCATTTTCTTATGTGTCATGAAAGGGGTGTTGTTGGAAATATTTATTTCTATACATATTTGTGGTGGgtaatgtttttgtatttctctTATGTTGCATGGTTGTTTTAAAACTCACATTTTATAATAAGTATGTTCttattttaatgtaaacaaTATCAAAATGCTTTATTAAAGGTTTTTCCCCAACTTTTATatcttttgtatattttgttgtataggACACGTGTAACAtgtcaattctttttttaaagattatttatgTTGGACAACTTGGACATTGGACAGTGATTGATGATATACCCTataataaatcattttcttCCTGTAAATGTTCACACTAGGAATTCACATGTGTCCAACTTCATACCATGCTAATACATATTTATGG

Function

NR:

description
interleukin-17A-like isoform X1

GO:

id name namespace
GO:0050896 response to stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248252 False 966 lncRNA 0.49 5 9595376 9602032
XM_039781120.1 True 1295 mRNA 0.43 4 9596827 9602348

Neighbor

gene id symbol gene type direction distance location
mcm3 mcm3 coding upstream 12753 9567431 ~ 9582623 (+)
elp3 elp3 coding upstream 148135 9403109 ~ 9447241 (+)
tlr5a NA coding upstream 447732 9135335 ~ 9147644 (+)
LOC120547164 NA coding upstream 468844 9124096 ~ 9126532 (+)
trnas-gcu_18 NA coding upstream 597996 8997299 ~ 8997380 (+)
emilin1a emilin1,LOC103372345 coding downstream 84309 9686657 ~ 9732654 (+)
ankef1a NA coding downstream 130740 9733088 ~ 9754633 (+)
snap25a snap25,snap25a,LOC107599071,LOC107698362 coding downstream 185719 9788067 ~ 9846851 (+)
LOC120546400 NA coding downstream 279786 9882134 ~ 9886722 (+)
LOC120547170 LOC103373899 coding downstream 290709 9893057 ~ 9904925 (+)
G183259 NA non-coding upstream 52161 9532524 ~ 9543215 (+)
G183255 NA non-coding upstream 68043 9521823 ~ 9527333 (+)
G183249 znf395 non-coding upstream 86895 9505448 ~ 9508481 (+)
G183191 NA non-coding upstream 266688 9327399 ~ 9328688 (+)
G183168 disp1 non-coding upstream 433323 9160340 ~ 9162053 (+)
G183309 NA non-coding downstream 155739 9758087 ~ 9758390 (+)
G183312 NA non-coding downstream 169872 9772220 ~ 9772463 (+)
G183320 NA non-coding downstream 245147 9847495 ~ 9848790 (+)
G183327 NA non-coding downstream 273733 9876081 ~ 9876412 (+)
G183350 NA non-coding downstream 332166 9934514 ~ 9935596 (+)
pnocb LOC103362991 other upstream 91102 9469609 ~ 9504274 (+)
LOC120547211 hmbox1 other upstream 270513 9296060 ~ 9324863 (+)
LOC120547311 NA other upstream 462598 9129535 ~ 9132778 (+)
LOC120546611 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 557683 9020960 ~ 9037693 (+)
LOC120546377 NA other upstream 986974 8459535 ~ 8608402 (+)
LOC120546402 NA other downstream 508722 10111070 ~ 10112635 (+)
cdc42bpab fzd3,LOC103374788 other downstream 634601 10236949 ~ 10399812 (+)
G183540 sf3b6,pm14,SF3B6 other downstream 1020388 10622736 ~ 10666472 (+)
ches1 foxn3 other downstream 2161795 11764143 ~ 11869192 (+)
bcl11bb LOC103368061 other downstream 3104870 12707218 ~ 12739384 (+)

Expression


Co-expression Network