Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120546402 |
| gene name | NA |
| gene type | misc |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 10111070 ~ 10112635 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248395 | False | 478 | TUCP | 0.65 | 4 | 10111237 | 10112361 |
| XM_039781327.1 | True | 678 | mRNA | 0.63 | 5 | 10111070 | 10112635 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120547052 | NA | coding | upstream | 114519 | 9994881 ~ 9996551 (+) |
| LOC120546401 | NA | coding | upstream | 177151 | 9931356 ~ 9933919 (+) |
| LOC120547170 | LOC103373899 | coding | upstream | 206145 | 9893057 ~ 9904925 (+) |
| LOC120546400 | NA | coding | upstream | 224348 | 9882134 ~ 9886722 (+) |
| snap25a | snap25,snap25a,LOC107599071,LOC107698362 | coding | upstream | 264219 | 9788067 ~ 9846851 (+) |
| hnrnpub | hnrnpu | coding | downstream | 97501 | 10210136 ~ 10220742 (+) |
| fbxo16 | NA | coding | downstream | 270112 | 10382747 ~ 10394227 (+) |
| vsnl1a | vsnl1,vsnl1b,LOC101070256,LOC102783710,LOC101471140,LOC106533326,LOC106921729 | coding | downstream | 498245 | 10610880 ~ 10661241 (+) |
| tdrd6 | NA | coding | downstream | 557482 | 10670117 ~ 10692564 (+) |
| ints9 | ints9 | coding | downstream | 595660 | 10708295 ~ 10723562 (+) |
| G183411 | NA | non-coding | upstream | 202 | 10110504 ~ 10110868 (+) |
| G183380 | NA | non-coding | upstream | 65965 | 10043978 ~ 10045105 (+) |
| G183363 | NA | non-coding | upstream | 134266 | 9976596 ~ 9976804 (+) |
| G183350 | NA | non-coding | upstream | 175474 | 9934514 ~ 9935596 (+) |
| G183327 | NA | non-coding | upstream | 234658 | 9876081 ~ 9876412 (+) |
| G183419 | NA | non-coding | downstream | 3870 | 10116505 ~ 10116775 (+) |
| G183421 | NA | non-coding | downstream | 4284 | 10116919 ~ 10117285 (+) |
| LOC120547246 | NA | non-coding | downstream | 31463 | 10144098 ~ 10161023 (+) |
| G183543 | glrx5 | non-coding | downstream | 537637 | 10650272 ~ 10728507 (+) |
| LOC120547320 | NA | non-coding | downstream | 643865 | 10756500 ~ 10760798 (+) |
| il17a/f3 | NA | other | upstream | 508722 | 9595376 ~ 9602348 (+) |
| pnocb | LOC103362991 | other | upstream | 606796 | 9469609 ~ 9504274 (+) |
| LOC120547211 | hmbox1 | other | upstream | 786207 | 9296060 ~ 9324863 (+) |
| LOC120547311 | NA | other | upstream | 978292 | 9129535 ~ 9132778 (+) |
| LOC120546611 | LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 | other | upstream | 1073377 | 9020960 ~ 9037693 (+) |
| cdc42bpab | fzd3,LOC103374788 | other | downstream | 124314 | 10236949 ~ 10399812 (+) |
| G183540 | sf3b6,pm14,SF3B6 | other | downstream | 510101 | 10622736 ~ 10666472 (+) |
| ches1 | foxn3 | other | downstream | 1651508 | 11764143 ~ 11869192 (+) |
| bcl11bb | LOC103368061 | other | downstream | 2594583 | 12707218 ~ 12739384 (+) |
| LOC120546167 | NA | other | downstream | 2834364 | 12946999 ~ 13008411 (+) |
