afdna (afdn,LOC102779179)


Basic Information

Item Value
gene id afdna
gene name afdn,LOC102779179
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 28539400 ~ 28649123 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU254572
TCCTACCTCAAAACCCAGGTCACCTCCCCCGACACGCTCTACACCGCCAAGTTTGTCTCCTACGAGGGCGACGAGGAAGACGAGGAGGAAGCCACCAAAGCAGGCAGTGGCGGCGGCAACCAATCAGGTCAGGCGAAGCTCTCGGCGACCAGGAAGTCGTACGGCGACCTTCCGGCCTCCGCCTCACCCAATCACGCCAGGCACCGGCCGCCGCCCACTGCGCGCAAGCCCCGCCCTCTTTCAGACGGCATCTTCCTGTCTAGCTCGTTCCAGCTGCCAGACAACAACTCCAACAGTACAGGTCCCCCCCTTCCTGCCAAACCCAGCTCCATGCCCCCCGGAGGCTTTAAAGGATTTAACTCGTACACTGGAAACTCAGCAGGAGTTGTAGGATCGGGAGAAGTCTACAACGACCCGCGAGACAAATGGCCGAAGAGcagcagcagcagccaggagCAGGAGAACTCGAACCCCAGCGGCGCCCCGGAGAGTCTCACCTTTAAGGAGCGCCAGCGTCTCTTCTCTCAGGGGAAGGAGGTTTCCAACAAGGTCAAGGCTTCACGCAAACTCATGGAGCTGGAGAACGAGCTCAACACCAAGTAGTAGACCGAGCCCTTCACCTCCCAGCGCCACCTTAACCAGGGCATTGCCACAGTAACGTTAAGGTGATCCTGGGACAACAAAAAACGGGCGCTCGCTTCCCGACCACTGACCATCTCCTCCTGTTTGTGTtgtcgtccccccccccccaccccttttttttattttaatcatcgAATAACTGGACCActcactttttttgacgtaGCTATATCGTTGCAATAGGAGAGACATTTATGGCTTAAAATATTTCCTCCCCTCCTTAAGGTCTGTCAAAGATATATAATGATaaagcactgtaaaaaaaagttttaattgtAACAAGTGAGAATTTGAGAATCACACAACAAAGGGGgatatatttttgtttataaAAATGGTTCTTGGGGCGAGGGGATGGAGAGGTTTATTCTCATtttaaattagctttttttttttattgttattttaatgcTCTTTTTCGGCATCATGTTGTTTTCACACTTTTAATTGCCAGCAGAAATGCCCACAGTTGAGCTCAAGACcaattgttgttttctttttttttttattaaattttcaGTGAGTGGAACTGCTATTTCATTCCGTAACAAGAGCATGGgattgttttttggttttttttggtgATGTTTTAGATAAACTCTGAATGATTCTCCAGAGGAGGATCGTAACAGTCCAGAGAAGGATCTTTAAGTGCACAACATTACTGTAAATATCTGGGTCCACAAGTGTCTCACTCTTTTACTACTGTAGAAAGCTGCCAGGCTACTAAAAACTGCAAAACTAATGTTATTTAACAGCATTTTGGTGACCGAAAAATCCCAACAGGAAGTACTGCTAAAACTGGACCGTCTCCCTGCCGTCAGGGgagtttttaagttttaagtGTTTCGCCCCAATCTGAGGTaactcatttttattttagtttaaaaatcCAATAGTCATTCTTTGCAGAGTTGTGTGAGATTAATTTGATCGATTGTACCTGAAATTCAAGCCAGAAAAGGATTTTTTCACTCACAATGCGATTGTTGGTTTTCAATCTCTTATTCTTTAAGTCCTCGTTGGCTTTACAGATATTTATTTCAAacgtggagagaaaaaaaaaaaaacatacttgcacaaaaacttttttttttaaataactatatcTGCAAACTGTTTTAACAAGTGGATTACATTCGGGACCTCTCGTACTGTGgtaatgtgtgttttctgtttttacacCAGCCGTAGTTCGGGGAtatccacacccacacacccacccacacacagttACCATAGTCCCTTTCACCAACACTGCTGATGTTGAAAAGGAGCGCACTTCAAACCCCGGGGTGTCCCCCAGtttcaaaattaaaaagataaacCAGCAatgtttcaaaatgtatctctctTCTGCAGTTTGACTCCATCCTGTGTGTGgatttatttcatgttttctcTTCAGAAGCCTCCACCGAAACTACACGATGAGATAAAGATGCCGTTCTAATTACTGGCCCATTTAAAAACCCCACAGACCACaccgtctcctctcctcccacaCCAACAGCAACTCCTTTTTAGGTTTCAAAATGAACAGAATCATTTAAATGGTTTCATGTTTAGCCTTTTGTAAATCATTAATAAATACAGATTTTTCAACA
>TU254578
TCCTACCTCAAAACCCAGGTCACCTCCCCCGACACGCTCTACACCGCCAAGTTTGTCTCCTACGAGGGCGACGAGGAAGACGAGGAGGAAGCCACCAAAGCAGGCAGTGGCGGCGGCAACCAATCAGGATTTAACTCGTACACTGGAAACTCAGCAGGAGTTGTAGGATCGGGAGAAGTCTACAACGACCCGCGAGACAAATGGCCGAAGAGcagcagcagcagccaggagCAGGAGAACTCGAACCCCAGCGGCGCCCCGGAGAGTCTCACCTTTAAGGAGCGCCAGCGTCTCTTCTCTCAGGGGAAGGAGGTTTCCAACAAGGTCAAGGCTTCACGCAAACTCATGGAGCTGGAGAACGAGCTCAACACCAAGTAGTAGACCGAGCCCTTCACCTCCCAGCGCCACCTTAACCAGGGCATTGCCACAGTAACGTTAAGGTGATCCTGGGACAACAAAAAACGGGCGCTCGCTTCCCGACCACTGACCATCTCCTCCTGTTTGTGTtgtcgtccccccccccccaccccttttttttattttaatcatcgAATAACTGGACCActcactttttttgacgtaGCTATATCGTTGCAATAGGAGAGACATTTATGGCTTAAAATATTTCCTCCCCTCCTTAAGGTCTGTCAAAGATATATAATGATaaagcactgtaaaaaaaagttttaattgtAACAAGTGAGAATTTGAGAATCACACAACAAAGGGGgatatatttttgtttataaAAATGGTTCTTGGGGCGAGGGGATGGAGAGGTTTATTCTCATtttaaattagctttttttttttattgttattttaatgcTCTTTTTCGGCATCATGTTGTTTTCACACTTTTAATTGCCAGCAGAAATGCCCACAGTTGAGCTCAAGACcaattgttgttttctttttttttttattaaattttcaGTGAGTGGAACTGCTATTTCATTCCGTAACAAGAGCATGGgattgttttttggttttttttggtgATGTTTTAGATAAACTCTGAATGATTCTCCAGAGGAGGATCGTAACAGTCCAGAGAAGGATCTTTAAGTGCACAACATTACTGTAAATATCTGGGTCCACAAGTGTCTCACTCTTTTACTACTGTAGAAAGCTGCCAGGCTACTAAAAACTGCAAAACTAATGTTATTTAACAGCATTTTGGTGACCGAAAAATCCCAACAGGAAGTACTGCTAAAACTGGACCGTCTCCCTGCCGTCAGGGgagtttttaagttttaagtGTTTCGCCCCAATCTGAGGTaactcatttttattttagtttaaaaatcCAATAGTCATTCTTTGCAGAGTTGTGTGAGATTAATTTGATCGATTGTACCTGAAATTCAAGCCAGAAAAGGATTTTTTCACTCACAATGCGATTGTTGGTTTTCAATCTCTTATTCTTTAAGTCCTCGTTGGCTTTACAGATATTTATTTCAAacgtggagagaaaaaaaaaaaaacatacttgcacaaaaacttttttttttaaataactatatcTGCAAACTGTTTTAACAAGTGGATTACATTCGGGACCTCTCGTACTGTGgtaatgtgtgttttctgtttttacacCAGCCGTAGTTCGGGGAtatccacacccacacacccacccacacacagttACCATAGTCCCTTTCACCAACACTGCTGATGTTGAAAAGGAGCGCACTTCAAACCCCGGGGTGTCCCCCAGtttcaaaattaaaaagataaacCAGCAatgtttcaaaatgtatctctctTCTGCAGTTTGACTCCATCCTGTGTGTGgatttatttcatgttttctcTTCAGAAGCCTCCACCGAAACTACACGATGAGATAAAGATGCCGTTCTAATTACTGGCCCATTTAAAAACCCCACAGACCACaccgtctcctctcctcccacaCCAACAGCAACTCCTTTTTAGGTTTCAAAATGAACAGAATCATTTAAATGGTTTCATGTTTAGCCTTTTGTAAATCATTAATAAATACAGATTTTTCAACA
>TU254581
TCCTACCTCAAAACCCAGGTCACCTCCCCCGACACGCTCTACACCGCCAAGTTTGTCTCCTACGAGGGCGACGAGGAAGACGAGGAGGAAGCCACCAAAGCAGGCAGTGGCGGCGGCAACCAATCAGGTCAGGCGAAGCTCTCGGCGACCAGGAAGTCGTACGGCGACCTTCCGGCCTCCGCCTCACCCAATCACGCCAGGCACCGGCCGCCGCCCACTGCGCGCAAGCCCCGCCCTCTTTCAGACGGCATCTTCCTGTCTAGCTCGTTCCAGCTGCCAGACAACAACTCCAACAGTACAGGTCCCCCCccccccccccaccacccttCCACACACCCATTTCCTTTTCATCTGAAACACAAGAGCAACATGCATTTAGACTCCCAAGTTGTGTTTTTTGAAACGCAACCAAGTGGGGTCAACATGTGTGATATCTAAAGTCCTGGGTTGTTCCTGGGTCGATACCTGCAGTCACCTGGTAGGGTCCAAGCACTCTTTTCAGTCATTAACACAACAATAGAGAAGAACTCTTCCTCACCGTTTGTACCCAGCGTTTCTTCTCGGCCTGTGGTGTAAAATATTGTGCCATGAACAGAGTCTGCAGGGTTTTATCTCTCAATTCAAACACATAACTggtatttatgttttttaattttttaccggtcaacaaatcccatggaaaaaaacaaaatcgaGAATCTGTCAGTCCGTCCCTCAGTACTGTCTGATTTCACTATCcctgtagggctgcagctaccgatcattttcattgtcgattcaTCCGTTGATTTATTTTAAGTCGTTTGGTCTAGAAAACGTCGATCGGTGTTTCCAAAAATGCCCTCCATGCCTCGTTTTGTCTACAACTCAAATATTTTCAGTTAACGGTCATAGAAGAATAAAGAAACCagtaaatattcatatttaattaGCTGTAATATTCTTTCTTAAATTAAAGTCATCACGtgaatagttgacaactaatcaactcatctttgcagctctgccATCCTGTCTGTGGCATGCTGCCCTTAATGCACATTTCTTCAAACTGAGGATGTCAATCTTTTATAAGctcacaaataaatacatatgtttattcTTAGTTTGGTAATTTCCTAAAATAGCTGGCACTGTAGCTTTCAGCAAACGTTACTCAGACAGGACTAAATGGTCGATTGACTATTTTTAGCTGCGGATTATTACGCCTTCGTTGCCCTACTCGGGAACAGCGGAAAGCTGTGTTTTGACCTAGTGGCCACACGCTGTACTGCATGTGACTCACATTGCCTCCAAAATACTTTCTTCTAAACATAATGATAGTGATAAAAGAAgcagctttttatttattacatttttttacatttactcaGCTTTTTGTACAGTATTATCAGAATGTTCTACTGAGCATCAAGCCTGCACGATTCAGGTTACAATATGAATCACcatttttttagcttagaattgatatcacgattctctgccacgatttttttctcacaaagtgtaatttttattgcacacatgaaccatgacaaaaccaaataaattggcagtaccaaacatagatttttttttttggcacttaTAGCACATTgcacatcaccacaagcctgtaaacatataTTCtacaatgaataaagaaaataaagtacatactggccatttaagtacagtaggctaccaaaaacaGGGaaatataacacattgaactaaatatggccctgatacaggctctagctgaactccttgaacatgtctttacataattaaaacatctcaatgtcaaatgctttcaaaaaattaattgaaggagagaagaagaaaaaaatcgaAGTCATTTAAAAGTTCAATCGTGAacaggggtgaatcgagatcgcgattttTAGAACGAtatatcgtgcaggcctactgAGCATGCTCTATGGACCCAAACACAGAAGCCTGAATTTACATCCATTTCTTATCCTCTATAGGTTCATCATAGGTTTTAGgcttttcatgggatttattGACACTAAGGAAAATATAGAATATTGGTAGACTTCTACTTTTAACGATCATAAAAATGGAACTAATTGTGTTTCTGTCCTGCTGTAGTATTTATTTGGGAATAAACCTCTGCAGGACTCCCAGTGGGTCCCGTAGTGGTGAACCACTCGGGCAGATCTGGCTCTGGCTGCGTCTGGCTTTAGGCTGGACGTAACTCGGGGGCGGTTTAGGAAAGACACAGGGACACATGAGCCAACTGATTAACGTCTCCTTCGGGGTCACAGGTCGCAGTCACCCGCCTCGTGTAAGATCCACCCGGCCTTTAACCGAGCCCAGGGTATAATTTTTATCCTTGAACAGGCAGCTTTTTTCCTTTCACAACTTGGCTTGATTTGGATATTAAATATCTGGAGTCCAGATATTATATAAATCCTACTGTAACTGTGATTTAATTCACTGTTTGTATGAGTTCAATATTGGATCTAAATGACAAGAAGTAGATCAGTCAGATGTAGATGTTTCAGGACAAACGGGTGTCCAGATCTTCAGCCGTCAGACATGTTGGACGGTGACCTCGGCCTGGGATCGCACCGACGCTTCCACAGACCATTTCCACTGCTTTTGGAATGGCCCTTTTAACAGCTTTTTACCGCTCTGTCTCTGTTCTCGGCTCGCTGCTCTACTCTAACGAGATCTGACTGTTTCTGCCTTAACGCTTCTCCAGAACGttccctctcttccttccttctgcTCAGGCTGGTCTGTGGGAAACAAAGTGATGTCGACTGGAGAAGCTGCTGGTTAAGGCAACCTGGGTCTCTGCTCAATAATCCAAAACTGTTAGGGAATATGagttttccacttttttttgtgatttaaaatgcaaaaatgcCTGGAATTCCTTTTATAAATGATGGGAGTAAAAGGGAGGCGGGTACCAGAGACCTCGACAGCCAGCAGCTTCTGTATCAccttttcatatttaaaaaaagagagaaaaaaaagctgataATATGAACGATGCTGACTCTTCTCTCACTGCTCTGTCTGTCGGCCGTGTGACTCCTGAACCTGGGACAGGATTTAACTCGTACACTGGAAACTCAGCAGGAGTTGTAGGATCGGGAGAAGTCTACAACGACCCGCGAGACAAATGGCCGAAGAGcagcagcagcagccaggagCAGGAGAACTCGAACCCCAGCGGCGCCCCGGAGAGTCTCACCTTTAAGGAGCGCCAGCGTCTCTTCTCTCAGGGGAAGGAGGTTTCCAACAAGGTCAAGGCTTCACGCAAACTCATGGAGCTGGAGAACGAGCTCAACACCAAGTAGTAGACCGAGCCCTTCACCTCCCAGCGCCACCTTAACCAGGGCATTGCCACAGTAACGTTAAGGTGATCCTGGGACAACAAAAAACGGGCGCTCGCTTCCCGACCACTGACCATCTCCTCCTGTTTGTGTtgtcgtccccccccccccaccccttttttttattttaatcatcgAATAACTGGACCActcactttttttgacgtaGCTATATCGTTGCAATAGGAGAGACATTTATGGCTTAAAATATTTCCTCCCCTCCTTAAGGTCTGTCAAAGATATATAATGATaaagcactgtaaaaaaaagttttaattgtAACAAGTGAGAATTTGAGAATCACACAACAAAGGGGgatatatttttgtttataaAAATGGTTCTTGGGGCGAGGGGATGGAGAGGTTTATTCTCATtttaaattagctttttttttttattgttattttaatgcTCTTTTTCGGCATCATGTTGTTTTCACACTTTTAATTGCCAGCAGAAATGCCCACAGTTGAGCTCAAGACcaattgttgttttctttttttttttattaaattttcaGTGAGTGGAACTGCTATTTCATTCCGTAACAAGAGCATGGgattgttttttggttttttttggtgATGTTTTAGATAAACTCTGAATGATTCTCCAGAGGAGGATCGTAACAGTCCAGAGAAGGATCTTTAAGTGCACAACATTACTGTAAATATCTGGGTCCACAAGTGTCTCACTCTTTTACTACTGTAGAAAGCTGCCAGGCTACTAAAAACTGCAAAACTAATGTTATTTAACAGCATTTTGGTGACCGAAAAATCCCAACAGGAAGTACTGCTAAAACTGGACCGTCTCCCTGCCGTCAGGGgagtttttaagttttaagtGTTTCGCCCCAATCTGAGGTaactcatttttattttagtttaaaaatcCAATAGTCATTCTTTGCAGAGTTGTGTGAGATTAATTTGATCGATTGTACCTGAAATTCAAGCCAGAAAAGGATTTTTTCACTCACAATGCGATTGTTGGTTTTCAATCTCTTATTCTTTAAGTCCTCGTTGGCTTTACAGATATTTATTTCAAacgtggagagaaaaaaaaaaaaacatacttgcacaaaaacttttttttttaaataactatatcTGCAAACTGTTTTAACAAGTGGATTACATTCGGGACCTCTCGTACTGTGgtaatgtgtgttttctgtttttacacCAGCCGTAGTTCGGGGAtatccacacccacacacccacccacacacagttACCATAGTCCCTTTCACCAACACTGCTGATGTTGAAAAGGAGCGCACTTCAAACCCCGGGGTGTCCCCCAGtttcaaaattaaaaagataaacCAGCAatgtttcaaaatgtatctctctTCTGCAGTTTGACTCCATCCTGTGTGTGgatttatttcatgttttctcTTCAGAAGCCTCCACCGAAACTACACGATGAGATAAAGATGCCGTTCTAATTACTGGCCCATTTAAAAACCCCACAGACCACaccgtctcctctcctcccacaCCAACAGCAACTCCTTTTTAGGTTTCAAAATGAACAGAATCATTTAAATGGTTTCATGTTTAGCCTTTTGTAAATCATTAATAAATACAGATTTTTCAACA
>XM_039782328.1
CACAGGCGCACCGGGAACGGGAAGCAGAAACAGATCAGACAGCAGGTCGGTCGGTCGGTGAGCTGAGagacagaccacacaaagtACCGGCGGAAAAACGGCAGACCTGAGCCTTTTGGTTTCTGTAGCGGCGGTTTCTTCTCCTGTGGACTTACGTTACGGGAAGTTTTATTCAACGGTTCAGACGGACAGAGAGGGTCAGAAAGGCTGTCCACCATGTCGGGGagcagggaggaggagaggaggaaactgGCCGACATCATCAACCACTGGAACGCCAACCGGCTCGACCTGTTCGAGATCAGCCGGCCCACAGAGGACTTGGAGTTCCATGGCGTGATGCGGTTCTACTTCCAGGACCGGGTTGCCGGTAACTTTGCCACCAAGTGCATCAGAGTGTCCAGCACAGCGACCACGCAGGACGTCATCGAGACGTTAGCTGAGAAGTTCAGACCAGACATGAGGATGCTCTCCTCGCCAAAATACTCCCTTTATGAGGTCCATGTCAGTGGCGaagaGCGTCAGCTGGACATGGACGAGAAGCCTCTTGTTGTTCAGCTGAACTGGAACAAAGACGACAGAGAAGGACGCTTTGTCCTGAAGAACGAGAACGACATCCTTCCCAAGAAGAGTCAGAGTAATGGGCCCGAGAAGGAGAAGGATGGAGTGATCCAGAACTTCAAAAGGACTTTGTccaagaaggagaagaagaaggaaaagaagagagagaaggagtcCGCCCGGATCCCCGATGGGGACGAGCAGACGCTCAGCCGGGAGGACGGGGAAAACAATCGTCTGGCGGCAGAGGTTTACAAGGACATGCCGGAGACCAGCTTTACCAGGACAATCTCCAACCCAGAGGTGGTGATGAAGAGGAGACGCCAGCAGAAACTGGAGAAACGCATGCAGGAGTTTATGAGCAGTGATGGGAGGCCCGACTCGGGAGGCACTTTGCGGATATACGCTGACAGTCTGAAGCCGAACATCCCGTATAAGACCATCCTGCTCTCCACTAGAGACACGGCTGACTTTGCTGTGGTGGAGGCGCTGGAGAAGTATGggctggagaaggagaaccccAGAGAGTACTGCATCGCTCGGCAAGATGATAAGTCGGGCAAGGACATGATTCTGGACGATACTGAGTGTCCACTGCAGATCTTCAGGGACTGGCCTGCTGACAGAGGATCGCTAGTGTTCCAGCTGAAAAAGAGACCCCCCGACTACCaggggaggaagggaaggaaaggCGACGACAAGGGCCTTCGAGGGAAGGAGGGCAGCACCAGCTCCTTGCCGCCCGAGAAACTGCCTTACCTGGTGGAGCTGAGCCCAGGGCGAGGGAATCACTATGCCTACTACGCCTATCGGCACCACGAAGacgGGTCTGACTCACGTGACAAACCAAAGCTGTACCGGCTTCAGCACAGCATCACCGAGGTCGGCTCAGACTGCACAGAGGACGGAGCCATCCAGCTGCTCGGTCCGGGGATTCTGCCCCACCACTGCAACCTCATGCACAGTGAAGGCATGGTCACTGTGACGCCGCACGGCCCAGACGCGGACACCTTTGTCGACGGGCAACGAGTTACCGAGACGACGCTGCTGCGTTCGGGCTCCACCCTCCAGTTTGGTTCTGCGCACGTCTTCAAGTTTGTGGACCCGATGTTCGACCAGGGAGGGAAAAGAGAACCGGCCTCCATGATGAGGAGCCGACACAAGTCTGGcagcgtaccagaaacCACCTTCGACCTTCACGGAGACGTCCACAGTGGATCTGCTCTGCCTACCAGCAAGAGCTCAGGGAAgctggagatggagagaggcaTGGTCAAACCCATGATCAGAGGAGAGCAGCAGGACAGCAGGTCTCAGGACATTTCAGCAGACAGAACCGAGTTGACTCTGCCAGCTGGCATCGAGTTCAGAGACAACTCTGAAGACACCTTCCTGTCAGCCATCATCAACTACACGAACAGCTCCACGGTCCACTTCAAACTCTCACCCACCTACGTCCTGTACATGGCCTGCCGCTTCGTCCTGTCCCCTTCTTACCGGCCCGACATGTCGCCGTCTGAGAGAACGCACAAGGTCATCGCCATCGTCAACAAGATGGTGAGCATGATGGAGGGAGTCATCCAGAAGCAGAAGAACATTGCAGGAGCGCTGGCTTTCTGGATGGCCAACGCCTCAGAACTGCTCAACTTCATCAAGCAGGACCGAGACCTGAGTCGCGTCACGCTGGACGCCCAGGACATCCTCGCCCATCTGGTCCAGATGGCTTtcaaGTACCTGGTCCACTGTCTTCAGGCTGATCTCAACAACTACATGCCTGCCTTCCTGGACGACCCCGAGGAGCATAATCCACAGAGACCCAAGATCGAGGACGTCCTGCACACCCTGACGGGGGCGATGTCGTTGCTGCGGCGGTGCAGAGTCAACGCCGCCCTGACCATCCAGCTCTTCTCGCAGCTCTTCCACTTCATCAACATGTGGCTCTTCAACAAGCTGGTGACGGACACGGAGTCGGGCCTGTGCTGTCACTACTGGGGGGCCATCCTCCGGCAGCAGCTCAGCCACATCGAGGCCTGGGCAGAGAAACAGGGTCTGGAGCTCGCCGCCGACTGCCACCTCAGTCGAATTGTACAGGCCACCACCCTGCTCACCATGGACAAATACTCCATGCAGGATGTGCAGAACATCCACAACACCTGCTTTAAGCTCAACTCCCTGCAGCTCCACGCACTCATGACCAACTACCACTGTGCTCCAGACGAGCCTTACATCCCACCTGAGCTGATAGACCACGTGGTTGCTGTGGCAGAGAACACCGCAGATGAGCTGGCGAGGAGTGATGGGAGAGAGGTCCAGCTGGAGGAGGATCCGGACCTGCAGCTGCCCTTCCTCCTTCCTGAGGACGGCTACTCCTGCGATGTGGTGCGCAGCCTCCCCAACGGCCTGCAGGACTTCCTGGAGCCGCTGCTGCAGAGAGGTTTCTGTAGGTTAGTACCCCACCCCCGTTCGCCTGGCACCTGGACTGTCCACTTTGAAGGAGCTGACTGTGACAGCCACTTCTCCGCTGCTGACAGTTCTGAGATGCCAATGAGGAAAGACCCGGAGGTTGTCACGGTAACCCTGAAGAAGCACAACGGCATGGGCCTCAGCATCGTGGCTGCCAAGggtGCTGGTCAGGAGAAGCTGGGCATCTACATCAAGTCTGTTGTCAAAGGAGGAGCAGCTGACGTGGATGGACGTCTGGCTGCAGGTGACCAGCTGTTGAGCGTGGACGGGCGCAGCCTGGTCGGCCTATCGCAAGAGAGGGCAGCAGAGCTGATGACGAGGACGGGCTCAGTTGTGACTCTGGAGGTGGCCAAGCAAGGAGCCATTTACCACGGACTGGCTACTCTCCTCAACCAGCCCAGCCCCATGATGCCAAGAGCATCGGACCGAGGCCGCGACAAGAACGGGAAACTGCGACCAAAGAGCGAAGGCTTCGAGTTGTACAACAACTCGGTGCAGAACGGCTCTCCGGAGAGTCCGCAGGCCGGCTGGGATTCTTACCCCGAACCAAAGAAGATGAGCAGCGAAGATCGACTTCTCAAGAACCGAGCCGACCACCGCTCCAGCCCCAACGTAGCCAATCAGAGCCAGAGTCCTGCGGGAAAAGCGGTGTACCCCGGAGGACCCGGCACTAAGATCACCTCCGTCTCCACCGGCAACCTGTGTGCAGACgATGAGCCCTCCCCTCCCTGTCCAGAGGCCTACCCCATCCCCACCCAGACCTACCCCAGGGAGTACTTCACCATCCCGGCCTCGAAGAGCCAGGATCGGGTCATCGGTCCTGGGCAGGGGCCCTCACAACACTGGCAGGGCATGGAGGACAGAGAACGCCTCCCATTGGTCGACAACATCCACAACAACAGCATGCAGCGGATTAACCACTCCCAGGAGGAGTTGTACCCCTCACCAGGAGGTATGAGGCCAGACGAGCGCATGCAGCAGCACTACCAGCAGGACTACCAGCACCGGGACCTGGACTACCAACACCGAGATCTTGACTACCAGAGAGGTCCACCGGGAGGAGGTCCTGACCACTGGGCCCCACAGCCGCAGGTGTCCTCCTCGTTGGAATCCTCCACATCCAGCCAAGAGCACCTCAACTTCTcagccgcctcctcctcctcctcccagaaGAACCAGAAGACCGGGCCGGGCCGATGGAAGACGCCCAACGCCCCTCACGCTGCGCCACCGCATTCGGCACAGACGCCTTCACGCTCCGACCTGCCCCCTCCGCCGCCCCCACCACCGGCCCCTTACCCTGACGCCTACGACCCCTACGAACCCCAGCCGGAGCTACCGCTCCCGCCACCTCCCACCGCGGTCTCTCCCGCaacagcccagcaggctgctgaCCGCAAGAAACGCGAGGAGCAGCAACGCTGGTATGAGAAGGAGAAAGCTCGTCTGGAGGAAGAGAGggagaggaagaggagagagcaaGAAAGGAAGCTGGGTCAGATCCGGGCCAACCCTGTCATGCCTGTCCAACCTCACAACAACGGAGGATCCATGCCTCCTCCTCACCACCAGCCCCCTCTGCCCTCTGTGGCCCCGCCCCTGCCCTACCTCCCCCCACAGCCTCAGCCACAGCCTCCCCCATCCAGACCCGAGAAGCTGGCCAGCCTGCCACGATCGGCTGTTCCTCCCCCTGCTAATGCCTCGATCCCTGGCATGGACACAGTGATCAGGGAGCTGTTGCCACAGCAGCAGCCACGGACCATTGAGAGGCGAGACCTGCAGTACATCACCATCAGTAAGGAGGAGCTAACGTCCAGCGACAGTCTGTCTCCAGACCCCTGGAAACGAGACGCCCGGGAGAAGGCcgagaaacagcagcagcttcacaTCGTCGACCTGCTGGACAAGGAGATCCAGGACCTCCAGTCAAAGCCAGAGCGAACTGCGGAGGAAAGCGACCGCTTGAGGAAGCTGATGCTAGAGTGGCAATTCCAGAAACGACTGCAGGAGTCCAAGCAAAGCgacgaggacgaggaggaggaggatgacgaGGACGTGGACACCTTGATGATCATGCAGAGGCTGGAGGCCGAAAAGAGAGCCAGGCAGAATGCTGTCCCAGCTATCTCTGTTCTAGACTTGTTGCAGGACGAAGAGCGACGGCGTAAGCAGCAGCTGGAGGAGATTCGTAAGCGGGAGGCGGAGGAGCGAGcaaaacaggaggaggagagaaggtggAGGGAGGAGGCCAAACGAGAGGCAGGGGAGAagaggagacaggaggaggagtaCTACACTCGCCTGGAGGCCGAGCGGCGCCGGCAGCACGAGGAGGCCGAGAGAAAGCTGCTGACGCCTGAGGAGCCGGCCGGTCTGTATCGGCCCCACTGCCGGATTACCAACCCCGCCCCCCACAACCCTACTaacacccccccgccccccccacaGAGAAACACCTCCTACCTCAAAACCCAGGTCACCTCCCCCGACACGCTCTACACCGCCAAGTTTGTCTCCTACGAGGGCGACGAGGAAGACGAGGAGGAAGCCACCAAAGCAGGCAGTGGCGGCGGCAACCAATCAGGTCAGGCGAAGCTCTCGGCGACCAGGAAGTCGTACGGCGACCTTCCGGCCTCCGCCTCACCCAATCACGCCAGGCACCGGCCGCCGCCCACTGCGCGCAAGCCCCGCCCTCTTTCAGACGGCATCTTCCTGTCTAGCTCGTTCCAGCTGCCAGACAACAACTCCAACAGTACAGGTCCCCCCCTTCCTGCCAAACCCAGCTCCATGCCCCCCGGAGGCTTTAAAGGATTTAACTCGTACACTGGAAACTCAGCAGGAGTTGTAGGATCGGGAGAAGTCTACAACGACCCGCGAGACAAATGGCCGAAGAGcagcagcagcagccaggagCAGGAGAACTCGAACCCCAGCGGCGCCCCGGAGAGTCTCACCTTTAAGGAGCGCCAGCGTCTCTTCTCTCAGGGGAAGGAGGTTTCCAACAAGGTCAAGGCTTCACGCAAACTCATGGAGCTGGAGAACGAGCTCAACACCAAGTAGTAGACCGAGCCCTTCACCTCCCAGCGCCACCTTAACCAGGGCATTGCCACAGTAACGTTAAGGTGATCCTGGGACAACAAAAAACGGGCGCTCGCTTCCCGACCACTGACCATCTCCTCCTGTTTGTGTtgtcgtccccccccccccaccccttttttttattttaatcatcgAATAACTGGACCActcactttttttgacgtaGCTATATCGTTGCAATAGGAGAGACATTTATGGCTTAAAATATTTCCTCCCCTCCTTAAGGTCTGTCAAAGATATATAATGATaaagcactgtaaaaaaaagttttaattgtAACAAGTGAGAATTTGAGAATCACACAACAAAGGGGgatatatttttgtttataaAAATGGTTCTTGGGGCGAGGGGATGGAGAGGTTTATTCTCATtttaaattagctttttttttttattgttattttaatgcTCTTTTTCGGCATCATGTTGTTTTCACACTTTTAATTGCCAGCAGAAATGCCCACAGTTGAGCTCAAGACcaattgttgttttctttttttttttattaaattttcaGTGAGTGGAACTGCTATTTCATTCCGTAACAAGAGCATGGgattgttttttggttttttttggtgATGTTTTAGATAAACTCTGAATGATTCTCCAGAGGAGGATCGTAACAGTCCAGAGAAGGATCTTTAAGTGCACAACATTACTGTAAATATCTGGGTCCACAAGTGTCTCACTCTTTTACTACTGTAGAAAGCTGCCAGGCTACTAAAAACTGCAAAACTAATGTTATTTAACAGCATTTTGGTGACCGAAAAATCCCAACAGGAAGTACTGCTAAAACTGGACCGTCTCCCTGCCGTCAGGGgagtttttaagttttaagtGTTTCGCCCCAATCTGAGGTaactcatttttattttagtttaaaaatcCAATAGTCATTCTTTGCAGAGTTGTGTGAGATTAATTTGATCGATTGTACCTGAAATTCAAGCCAGAAAAGGATTTTTTCACTCACAATGCGATTGTTGGTTTTCAATCTCTTATTCTTTAAGTCCTCGTTGGCTTTACAGATATTTATTTCAAacgtggagagaaaaaaaaaaaaacatacttgcacaaaaacttttttttttaaataactatatcTGCAAACTGTTTTAACAAGTGGATTACATTCGGGACCTCTCGTACTGTGgtaatgtgtgttttctgtttttacacCAGCCGTAGTTCGGGGAtatccacacccacacacccacccacacacagttACCATAGTCCCTTTCACCAACACTGCTGATGTTGAAAAGGAGCGCACTTCAAACCCCGGGGTGTCCCCCAGtttcaaaattaaaaagataaacCAGCAatgtttcaaaatgtatctctctTCTGCAGTTTGACTCCATCCTGTGTGTGgatttatttcatgttttctcTTCAGAAGCCTCCACCGAAACTACACGATGAGATAAAGATGCCGTTCTAATTACTGGCCCATTTAAAAACCCCACAGACCACaccgtctcctctcctcccacaCCAACAGCAACTCCTTTTTAGGTTTCAAAATGAACAGAATCATTTAAATGGTTTCATGTTTAGCCTTTTGTAAATCATTAATAAATACAGATTTTTCAACA

Function

symbol description
afdn Enables actin filament binding activity and small GTPase binding activity. Involved in several processes, including bicellular tight junction assembly; establishment of endothelial intestinal barrier; and positive regulation of cell-cell adhesion mediated by cadherin. Located in several cellular components, including cell-cell contact zone; nuclear speck; and tight junction. Part of pore complex. Biomarker of Parkinson's disease and breast carcinoma.

NR:

description
afadin-like isoform X4

GO: NA

KEGG:

id description
K05702 AF6, MLLT4; afadin

RNA

RNA id representative length rna type GC content exon number start site end site
TU254572 False 2249 TUCP 0.44 3 28639454 28649123
TU254578 False 2024 lncRNA 0.42 3 28639454 28649123
TU254581 False 4969 TUCP 0.42 3 28639454 28649123
XM_039782328.1 True 7730 mRNA 0.55 39 28539400 28649123

Neighbor

gene id symbol gene type direction distance location
ncoa1 ncoa1 coding upstream 72527 28393107 ~ 28466873 (+)
ptrhd1 ptrhd1,LOC102782396,LOC103399259 coding upstream 156316 28381682 ~ 28383084 (+)
fam184ab fam184a,LOC101465847,LOC102781517 coding upstream 159552 28203630 ~ 28379848 (+)
man1a1 man1a1,LOC102782693 coding upstream 376780 28001397 ~ 28162620 (+)
tbc1d32 tbc1d32 coding upstream 788747 27673178 ~ 27750653 (+)
rfx6 rfx6,LOC102778618,LOC102305591,LOC102193265 coding downstream 20139 28669262 ~ 28689591 (+)
vgll2a vgll2,LOC102778318 coding downstream 92045 28741168 ~ 28748192 (+)
plg plg coding downstream 124202 28773325 ~ 28786818 (+)
LOC120547119 NA coding downstream 217090 28866213 ~ 28872603 (+)
gpr31 NA coding downstream 253253 28902376 ~ 28906380 (+)
LOC120546306 NA non-coding upstream 35009 28500729 ~ 28504391 (+)
G187915 NA non-coding upstream 119138 28419992 ~ 28420262 (+)
G187906 NA non-coding upstream 161760 28365238 ~ 28377640 (+)
G187886 NA non-coding upstream 342714 28177401 ~ 28196686 (+)
G187878 NA non-coding upstream 373073 28163132 ~ 28166327 (+)
trnal-cag_2 NA non-coding downstream 3479 28652602 ~ 28652684 (+)
G188057 NA non-coding downstream 229625 28878748 ~ 28880435 (+)
G188069 NA non-coding downstream 265279 28914402 ~ 28914798 (+)
G188091 NA non-coding downstream 281935 28931058 ~ 28944726 (+)
G188097 NA non-coding downstream 324476 28973599 ~ 28973911 (+)
LOC120546215 LOC104930085 other upstream 1501172 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 1801597 26695430 ~ 26737803 (+)
G187574 NA other upstream 1853893 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 2087035 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 2108003 26413691 ~ 26431397 (+)
ttll2 ttll2 other downstream 223563 28872686 ~ 28883121 (+)
G188063 NA other downstream 237367 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 461835 29110958 ~ 29132700 (+)
G188167 ucn other downstream 485048 29134171 ~ 29136917 (+)
si:ch211-245h14.1 NA other downstream 643582 29292705 ~ 29312364 (+)

Expression


Co-expression Network