LOC120547337


Basic Information

Item Value
gene id LOC120547337
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 20883137 ~ 20885504 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782906.1
TCTGTCACCTGAAAGGGGCGGCAGTGACACACGTGCTAAACAACACTAAGCAGACTTCCTTCAACAGAATAAAAAGATGCGTTTCACATCCACCTTGGACCAAATAAATCAGTGTGAGACACATTGAAGGGATTTACTTGCTTTCTAATTTAGTGGGAGCCAGTCACAAGAGGCAGAATGCGGGACATGCTGGAGAGGCTGCAGACCATTAAGGAGGAGCAGGACTGCGAGCCAGAGTTTTTTGGAGCAGACTATGATGTAGACAAGGAGCCCCAACAGGCAGTGGTGTTTGAGGACTCCTCACCTATTGACAACATCCTGAGGGAGGCCCACTCCATACGCATGGAGATCTCCTTGCTCCACTTACAGGTGAAGCGTCTGAGCACACATAACGAACGCTTTAGCACCTCTGTGCGGCGTCTCACCCTACTCAAAAAGGACTCTGACTCCATCGCCAGGGGGATCCAGCAACGTGGGGAGGCTCTGCACGTCCGTCTTCAGGGCCTGGGTAAAGAGAGCAGCAGGTTAGAGGTAAAAGAAGGTCCCAACTCGGCTGTTAGTCGCATTGCCCGAACTCAGTGTGACACACTGACCCGTGCCTTCCATGCTGCCATGAGTGACTACAATGAGGCAGAGGAGATGCAGAGAAATTCATGTCGGAGGAGGATCCAGAGACAGGCCTCCATAATGGGTACTGAAATCACCGATGTCCAGCTGGATTTGATGGTGGACAAAGGTGGTGAGGGATGGGCTGAGCTGTCCCAGAGCCTGCAGACCCCAGGTGGAAGCTCGTCCCGCTGGGCGATGTGTGAGATCAAGGGCAGACACAAGGAGCTGGTGGAGCTGGAGGTCAGGCTGAAGCAGGTCCATGAACTGTTCCTGCACATGGCCGTGATGGTGGAGGAGCAGGGATCCATGCTTGATAACATTGAGTCTAATGTGTGTGGCACTCAGGAATGTGTTGAGAAAATCAATGTTGACATCAAGAAGGCCCTACAGTACAAGAGGAAGAATCCTTTTCAGCAATGTTGTCCCTGTCTACCCTGTTGGAGACACAACCAAACTTTTTAGGGCTTACTTTGACTTAATGCAATTTTATGTatgattttaaaaaatgaaataaacatttACCTGTGTAAAAACCGTTA
>XM_039782907.1
tttttttcatacattgAGATAGCTTCTAAAATAGTTTAATGATTTTGTTTCACAAATATGGTATAAGGAAATGGATATTCTGTGTACAGACTGAGACTGAATGAAAGAATCCGTGGCAGAAATTTAGGCAGAATGCGGGACATGCTGGAGAGGCTGCAGACCATTAAGGAGGAGCAGGACTGCGAGCCAGAGTTTTTTGGAGCAGACTATGATGTAGACAAGGAGCCCCAACAGGCAGTGGTGTTTGAGGACTCCTCACCTATTGACAACATCCTGAGGGAGGCCCACTCCATACGCATGGAGATCTCCTTGCTCCACTTACAGGTGAAGCGTCTGAGCACACATAACGAACGCTTTAGCACCTCTGTGCGGCGTCTCACCCTACTCAAAAAGGACTCTGACTCCATCGCCAGGGGGATCCAGCAACGTGGGGAGGCTCTGCACGTCCGTCTTCAGGGCCTGGGTAAAGAGAGCAGCAGGTTAGAGGTAAAAGAAGGTCCCAACTCGGCTGTTAGTCGCATTGCCCGAACTCAGTGTGACACACTGACCCGTGCCTTCCATGCTGCCATGAGTGACTACAATGAGGCAGAGGAGATGCAGAGAAATTCATGTCGGAGGAGGATCCAGAGACAGGCCTCCATAATGGGTACTGAAATCACCGATGTCCAGCTGGATTTGATGGTGGACAAAGGTGGTGAGGGATGGGCTGAGCTGTCCCAGAGCCTGCAGACCCCAGGTGGAAGCTCGTCCCGCTGGGCGATGTGTGAGATCAAGGGCAGACACAAGGAGCTGGTGGAGCTGGAGGTCAGGCTGAAGCAGGTCCATGAACTGTTCCTGCACATGGCCGTGATGGTGGAGGAGCAGGGATCCATGCTTGATAACATTGAGTCTAATGTGTGTGGCACTCAGGAATGTGTTGAGAAAATCAATGTTGACATCAAGAAGGCCCTACAGTACAAGAGGAAGAATCCTTTTCAGCAATGTTGTCCCTGTCTACCCTGTTGGAGACACAACCAAACTTTTTAGGGCTTACTTTGACTTAATGCAATTTTATGTatgattttaaaaaatgaaataaacatttACCTGTGTAAAAACCGTTA
>XM_039782908.1
ACCAccattttttaagttttgtgcAGCATGTGGTTGACAAAATGAATGTACTGAAGAACTACTTAAACATATATTGTGCAACACAATTTTCTGCCCTAACTCTACTTTCAAAGGCAGAATGCGGGACATGCTGGAGAGGCTGCAGACCATTAAGGAGGAGCAGGACTGCGAGCCAGAGTTTTTTGGAGCAGACTATGATGTAGACAAGGAGCCCCAACAGGCAGTGGTGTTTGAGGACTCCTCACCTATTGACAACATCCTGAGGGAGGCCCACTCCATACGCATGGAGATCTCCTTGCTCCACTTACAGGTGAAGCGTCTGAGCACACATAACGAACGCTTTAGCACCTCTGTGCGGCGTCTCACCCTACTCAAAAAGGACTCTGACTCCATCGCCAGGGGGATCCAGCAACGTGGGGAGGCTCTGCACGTCCGTCTTCAGGGCCTGGGTAAAGAGAGCAGCAGGTTAGAGGTAAAAGAAGGTCCCAACTCGGCTGTTAGTCGCATTGCCCGAACTCAGTGTGACACACTGACCCGTGCCTTCCATGCTGCCATGAGTGACTACAATGAGGCAGAGGAGATGCAGAGAAATTCATGTCGGAGGAGGATCCAGAGACAGGCCTCCATAATGGGTACTGAAATCACCGATGTCCAGCTGGATTTGATGGTGGACAAAGGTGGTGAGGGATGGGCTGAGCTGTCCCAGAGCCTGCAGACCCCAGGTGGAAGCTCGTCCCGCTGGGCGATGTGTGAGATCAAGGGCAGACACAAGGAGCTGGTGGAGCTGGAGGTCAGGCTGAAGCAGGTCCATGAACTGTTCCTGCACATGGCCGTGATGGTGGAGGAGCAGGGATCCATGCTTGATAACATTGAGTCTAATGTGTGTGGCACTCAGGAATGTGTTGAGAAAATCAATGTTGACATCAAGAAGGCCCTACAGTACAAGAGGAAGAATCCTTTTCAGCAATGTTGTCCCTGTCTACCCTGTTGGAGACACAACCAAACTTTTTAGGGCTTACTTTGACTTAATGCAATTTTATGTatgattttaaaaaatgaaataaacatttACCTGTGTAAAAACCGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782906.1 True 1148 mRNA 0.50 2 20883137 20885504
XM_039782907.1 False 1103 mRNA 0.49 2 20883137 20885205
XM_039782908.1 False 1089 mRNA 0.49 2 20883137 20885072

Neighbor

gene id symbol gene type direction distance location
trnal-uaa_20 NA coding downstream 5191 20877864 ~ 20877946 (-)
utrn utrn coding downstream 8393 20686217 ~ 20874744 (-)
grm1a grm1,LOC100701745 coding downstream 269329 20580127 ~ 20613808 (-)
LOC120546714 rab32 coding downstream 329304 20536868 ~ 20553833 (-)
adgb LOC104954516 coding downstream 348864 20490465 ~ 20534273 (-)
LOC120546146 LOC103355020,LOC104928884,LOC104962358,LOC101075501 coding upstream 1085 20886589 ~ 20889736 (-)
zbtb2b zbtb2,LOC104964770,LOC102290046 coding upstream 96291 20981795 ~ 20989362 (-)
tmem181 tmem181,LOC102777939 coding upstream 293406 21178910 ~ 21186119 (-)
tulp4a tulp4,LOC102779174 coding upstream 301282 21186786 ~ 21223267 (-)
msgn1 msgn1 coding upstream 351650 21237154 ~ 21237826 (-)
LOC120546930 NA non-coding downstream 200105 20672237 ~ 20683032 (-)
G186018 NA non-coding downstream 254278 20628660 ~ 20628859 (-)
G186004 NA non-coding downstream 320804 20536106 ~ 20562333 (-)
LOC120546243 NA non-coding downstream 509387 20248660 ~ 20373750 (-)
G185901 NA non-coding downstream 899996 19982748 ~ 19983141 (-)
LOC120546177 NA non-coding upstream 273867 21159371 ~ 21165989 (-)
G186148 myct1,LOC103355010 non-coding upstream 275733 21161237 ~ 21162894 (-)
G186130 NA non-coding upstream 283005 21168509 ~ 21172624 (-)
G186228 NA non-coding upstream 390415 21275919 ~ 21325593 (-)
G186271 NA non-coding upstream 552232 21437736 ~ 21469376 (-)
G186006 NA other downstream 315658 20562437 ~ 20567479 (-)
ccdc167 ccdc167 other downstream 1033333 19846958 ~ 19849804 (-)
LOC120546212 fam150b,LOC104941953,LOC100704438 other downstream 1230210 19648527 ~ 19652927 (-)
LOC120546238 efr3b,LOC101073163 other downstream 1528821 19334055 ~ 19354316 (-)
LOC120546223 LOC102213764,LOC101481591 other downstream 1975883 18904537 ~ 18907254 (-)
syne1a syne1,LOC102291171,LOC103355013,LOC102194633 other upstream 126888 21012392 ~ 21154812 (-)
LOC120547346 NA other upstream 287337 21172841 ~ 21173006 (-)
LOC120547366 NA other upstream 289834 21175338 ~ 21175528 (-)
si:ch211-51e12.7 NA other upstream 341462 21226966 ~ 21236529 (-)
armc2 armc2 other upstream 440752 21326256 ~ 21348649 (-)

Expression


Co-expression Network