G191220


Basic Information

Item Value
gene id G191220
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 1956619 ~ 1975200 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU259605
acacacagacacatacacacacacacagagacacacagacacatacacacacacacagagacacacagacacatacacacacacacagacacccatcAGGGTTTCATTTTCCACCATCAAGGTGTGAATGAGTGAATTTCCGCTCCGAGGAATCAGCTGATCCCCAGACGCTCCCAGGTCAGTTTAATATGAGGCTGTTGACGTGCTGCTTCTATTTTAATTTCAGCTGATAAATGGGATCTGccatttattcaatttcatattaAATCATTTCCTAGCCTGGCATGCTTGCgttttaaagggtcagttcacacagttacacaaccAGTACTTTAAAAAGAACTTaaaagtagagatgcaccgattacaccTTTCTCGGCCGATTTCCGATTtgctttgagttaggccagccgataccgattttagccgataccgatttcattttttctaaccactttaaatatgtattttctatcttttctttaatagaacatgttgttgaacagataatggatcactatataatagaactatataaattactcctggtgtgggacattcacacacatctaaagagcaaccacagacttcagatacagtataaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaagagacttcagatacagtattaggggaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259605 True 748 lncRNA 0.39 3 1956619 1975200

Neighbor

gene id symbol gene type direction distance location
LOC120548430 NA coding upstream 31073 1885951 ~ 1925546 (+)
LOC120548429 NA coding upstream 74571 1878418 ~ 1882048 (+)
LOC120548061 NA coding upstream 100912 1849313 ~ 1855707 (+)
LOC120548423 NA coding upstream 204642 1749904 ~ 1751977 (+)
LOC120548209 NA coding upstream 286758 1629477 ~ 1669861 (+)
LOC120547899 LOC102301710,LOC107396804,LOC100696318 coding downstream 30944 2006144 ~ 2111871 (+)
trnat-ugu_6 NA coding downstream 70546 2045746 ~ 2045819 (+)
trnat-agu_12 NA coding downstream 77727 2052927 ~ 2053001 (+)
trnat-agu_14 NA coding downstream 143547 2118747 ~ 2118820 (+)
trnat-agu_15 NA coding downstream 146192 2121392 ~ 2121465 (+)
G191209 NA non-coding upstream 24768 1931283 ~ 1931851 (+)
G191206 NA non-coding upstream 34762 1899761 ~ 1921857 (+)
G191205 NA non-coding upstream 42688 1909632 ~ 1913931 (+)
LOC120548173 LOC101476819 non-coding upstream 139477 1816084 ~ 1817142 (+)
LOC120548281 NA non-coding upstream 140859 1814427 ~ 1815760 (+)
G191229 NA non-coding downstream 10239 1985439 ~ 1985750 (+)
G191214 NA non-coding downstream 23991 1999191 ~ 2000044 (+)
G191233 NA non-coding downstream 46493 2021693 ~ 2034056 (+)
G191218 NA non-coding downstream 114915 2090115 ~ 2153393 (+)
G191213 NA non-coding downstream 126508 2101708 ~ 2117071 (+)
G191212 NA other upstream 7385 1948390 ~ 1949234 (+)
G190785 NA other upstream 176637 1701556 ~ 1779982 (+)
G190758 NA other upstream 341073 1581834 ~ 1615546 (+)
G190757 NA other upstream 413327 1542856 ~ 1543292 (+)
G190735 NA other upstream 416781 1535297 ~ 1539838 (+)
G191230 NA other downstream 27612 2002812 ~ 2004228 (+)
G191236 NA other downstream 72757 2047957 ~ 2104697 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other downstream 293628 2268828 ~ 2316402 (+)
G191565 sptbn1 other downstream 780954 2756154 ~ 2761679 (+)
G191567 sptbn1 other downstream 786850 2762050 ~ 2766062 (+)

Expression


Co-expression Network