G191233


Basic Information

Item Value
gene id G191233
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 2021693 ~ 2034056 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU259628
TGAACTCTGGAGGACTGACCGGTTTATTGAGATGCAGGATGTGACTAGTTTAGCTTTGAGACTTTTACAGGATACATTGGAAGGTTTCTGAGCACATTACACCACTCAcacattatttattcatgtcTTTGTTTCTACTCGGTTGGACACTTTTAaacaggaaaacaacaaaatcctAAAATGCACATTAGCTTAGCAAGAGAGAAAATCAATCAACTGTTTAATGTACAAAATGTCAAGAAAATTGTCCATCACATGTCAcagagcccaagatgacgtctttAACTGTCTTGTTCGACCAACAGTCTAAAACccccaaaatattcagtttataataatatgaaacagagaaaaagcaggaaatcatcacaatCATCACAGCATTATTACTTTAAAAACGACCAAAACTATCAATGGATTATCAGAATAGTTGTGTGACGATCGGTTATTAAAGTAAACTAATACaaaaataagtgaaaaaaatattttagtaaactgaaactcaataaaaactaaaaccttcaagaaaaaagtaaaacttaaagctacattgtgtaagaatttctcccatctaacggtgaaattgtatatgacaatcAACTAactattactttctagcccctcctaTTCCGATTgcgttttaactcctacggtggccaaaCCCAAAATTAGCTCTGACTATCTCctgcagctgttctagccactccaatattaactttggtcttgttgcctTGCCTTTCaactcgctcgtatgtattctgaatgattctgaatgtcagattctacgcttacgagaatattttgattagttggtggaagtaattacacgtaaatgagcacatatttgtgaaagaacaaagttttttttgctaagaatcaactcaaaaaattacacaatgtaggtttaagtgAAACTATATCGCCTGGTTAAAAACTTATATATAAATGaatgcatgtttaaaaaaacaaacaatatttaaATCCCACGATTGAAAATCAAATGCCTACCCATCGAATGAATATTGAATATTCGATCCAGCCCTACACCAAGGTTTAAAGTAGTTGAAAGTCTCTTATTTTGAAGGCCAAATAacagctgtttgtttattccCTGATGCTGATAGAAAAGTatgataaaagaaaagatatttGGCAGTTTTAATCTCTGTGtaattgttttt

Function

GO: NA

KEGG:

id description
ko04062 Chemokine signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU259628 True 1181 lncRNA 0.33 3 2021693 2034056

Neighbor

gene id symbol gene type direction distance location
LOC120547583 opn4,LOC107372404 coding upstream 30879 1972182 ~ 1990814 (+)
trnat-agu_10 NA coding upstream 57594 1964026 ~ 1964099 (+)
trnat-cgu_3 NA coding upstream 60728 1960892 ~ 1960965 (+)
LOC120548430 NA coding upstream 96147 1885951 ~ 1925546 (+)
LOC120548429 NA coding upstream 139645 1878418 ~ 1882048 (+)
trnat-ugu_6 NA coding downstream 11690 2045746 ~ 2045819 (+)
trnat-agu_12 NA coding downstream 18871 2052927 ~ 2053001 (+)
trnat-agu_14 NA coding downstream 84691 2118747 ~ 2118820 (+)
trnat-agu_15 NA coding downstream 87336 2121392 ~ 2121465 (+)
LOC120548117 LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 coding downstream 159244 2193300 ~ 2200457 (+)
G191214 NA non-coding upstream 21649 1999191 ~ 2000044 (+)
G191229 NA non-coding upstream 35943 1985439 ~ 1985750 (+)
G191227 NA non-coding upstream 38098 1972658 ~ 1983595 (+)
G191220 NA non-coding upstream 46493 1956619 ~ 1975200 (+)
G191209 NA non-coding upstream 89842 1931283 ~ 1931851 (+)
G191218 NA non-coding downstream 56059 2090115 ~ 2153393 (+)
G191213 NA non-coding downstream 67652 2101708 ~ 2117071 (+)
G191240 NA non-coding downstream 91146 2125202 ~ 2152936 (+)
G191241 NA non-coding downstream 104826 2138882 ~ 2192858 (+)
G191245 NA non-coding downstream 110617 2144673 ~ 2233390 (+)
G191230 NA other upstream 17465 2002812 ~ 2004228 (+)
G191212 NA other upstream 72459 1948390 ~ 1949234 (+)
G190785 NA other upstream 241711 1701556 ~ 1779982 (+)
G190758 NA other upstream 406147 1581834 ~ 1615546 (+)
G190757 NA other upstream 478401 1542856 ~ 1543292 (+)
G191236 NA other downstream 13901 2047957 ~ 2104697 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other downstream 234772 2268828 ~ 2316402 (+)
G191565 sptbn1 other downstream 722098 2756154 ~ 2761679 (+)
G191567 sptbn1 other downstream 727994 2762050 ~ 2766062 (+)
G191571 NA other downstream 736577 2770633 ~ 3018448 (+)

Expression


Co-expression Network