hif1an (hif1an)


Basic Information

Item Value
gene id hif1an
gene name hif1an
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 16649868 ~ 16659077 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU263818
GGTGCCTCCACACCCAAGAGGATAGAGTACCCCCTGAGGGCTCACCAGAAGGTGGCCATCATGAGAAATATTGAGAAAATGCTGGGAGAAGCACTTGGAGATCCACATGAGgTTGGACCTTTACTGAAAACGATGATCAAGGGGCGATATGACCATGATCTCGGTTAGAGCGCCACTCTTAAAAGAGTGACCTGGACTGCGGTGCAATCTTTTTGCCGCGTGAAAGTGAGACTGCTGCATGCGTAATGCGCATTCTGGCTTTTTTAAGCATACGTATCACTGCACGGCAATAAGCAGCCACCTGAAAACCATTCTGCTTCAGTTGTCTCCGAGTGCCATGGTCATTGCAAATACATCTATCACAGAAGAAACATTGGACTAACTCAGTGGAATTCCACCTACTTGAagaagtctttttaaaaaaaatcttttgtctTTGAAAAGAAGGCCTCATTTGGATTAAGTCTAGATATATTTATGTAAATCAGTGTTCTCTCAACATTCTTAATTCAAGCTAGTGGGTTTTTGGGTGCATGCAAATGAAGTTGTAAGATCGGTACCTTTGGGACAACCTCAATATTTTGACCACTAATGGATGAGTCAAAGGGtattacatatacagtacacatcaGTTAGATACTTTCTTATATACATGTTCTAACACAGTTATGGATTGATTCCTTAGTGTGGAGTGATCATATTGTATTCTCCATCTTTAGCACTAATACAGCTTTAAAACTGTTTTGGTTCATACCTCTAAAGTTGACAGGTTTTTTAAGGGTCTTCTATAAATATATCCACATAATCTGCATTATCTCCACTCCTACTTACATGGTTTTGGGGAGTGAGCAGCAAGAATTTTCTGTTGCAAAGAAGACAGCATAGGCACGGTAATAAAACATAAGTACAGTGATTTTAAAACTGATGAAATATGTGTGGGTGGGGAAAAAAGGGGGCTCGTATATTCAGCTGAAGGAGTATGTGACTGCTTGCAGCTAAACTGTTTACCTGAGCGACGCTGCTTTGTGTTTATACATGCTCTTGCTTGTTTGATTTGTTTGACTTTATTGAATGTGCTATTCTGCGTACCAGTAATGAGGGTAAGATGAGGGGCACTGGAAATAAATGACATACTGCAATTTTAGTTGCAAATACAGGtaacttaaataaataaaataaaatacagtaagCCACTGTTGTTGGGAAGATTTTTCAGAGGAATTACCAGTGATGTTTTCTTAGGAATATGATGGTTAAAACTGTAAAAGTGGTTAACTTGAACTGCTTAAATGATAGATTTATGTAAAAATGTTATCAATGCACTGAACTAGCAGGACCATCTGCTGGGATGTAGCTTATGTACCAGCCATTGCAGCGCAACACAATGTACCATCTAGTGGTGAAGTTGTATAGTTACCTGGTCCATGCACTATACTGCTGCAATACAAATATTCAACGTGCTATATTGAACGCAGCAGATCTGGGATGAAATGACAAAAGTCTAATTTCAGTTGGAAACGTGTACTTGGTCAGTGATCCTCAGACATGCACTTATTTTTACTCACATGCAGCCATATTTTGAAGACCTTAAAGAGAGCAAGATGGCGGTTTCTGTGCACATTTAAAGTGCTCTCCTGAACTGttgtaaaaaatatacattGAACAAAAAGAGGATAATTTCACGTTGTGCTGTATGTGCCAAACCAACATACAAAGCAGTAGATGGGTATCTGTATTCAGAAAGGAATATCCATGCACTAAATTTACCAGGAATACACGTTCAGGTGTTTTGTTATGATTAACCTTTAGATTGTTGATAACGTGCATATCTATTTCTTACAAATTGCACAATGATGGAACAGGGATACTTCCTCTGTAAAATAATGACATACCTGATGTGGGACTGATGTTTCATCTCTCTCTTAAATTGCTAGGTTAACCCTGTTTACTGTATGTGCCTTGTTTAAAAGCGGCATGGCACTAAATGTTGCAACAACTTgatttggaattttttttattttatggtcaaaatgttttcactctggCATTAAATCGCTTTAAAGGTAGGATTGACATGGTTCATAGCGATCAAGGCATGTTTTTATTGATGGATGCCTGTTTTCAACGTACAGTATGTGCTCTCCTTGTTCCTCTGATTAAAGTTTGTTTGCAAAGTTCTACA
>XM_039784733.1
CCTTTGTGTCGTTTGTTTTCTGGCTGTAAACACAGCCTACACACGGAACAGAGCCGGAGACTATGGGCTCCTGCAGGAAGGTACATCGCTGTTAATGGGGAAACTTGTATGATAACGTCCATTAGTCCCGCGGCTGACTCTTTAGCCTAGCAGGGAGAGTCCGGAAGAAAAGCCAGTGTCTGGTTGTTTCACTGTAAGGAGGACGGAGACAGCCAATCCGCGCTTGTCGGCGACCATGGCATCGGCGACCGTTGTGGAGGCTGATCCGTCGGCAAACGAAGGCGGCGCTGCTTTTACTGGCGTCCCGAACTGGGACTGGGATGAGTCTCAGCTCCGAAAATATTCTTTCCCAACCAAGCCCATTCCGAGACTGTCTCATACGGACCCCAGAGCAGAGATGTTAATAAGCAACGAGGAACCAGTggttttaacagacacaaacCTTGTGTATCCAGCTCTCAAATGGGACATTGCATATCTGCAGGAGAACATTGGAAATGGAGACTTTTCTGTTTACACTGCAGAAAACCACAAATTCCTCTACTATGATGAGaagaaaatggcaaattttGAGAACTTTGTCCCCAAGTCACAACGAATGGAAATGAAATTCTCTGAATTTGTGGATAAAATGCATTTAATGGAGGAAaaaggtggagaggagagGGTATATTTGCAGCAGACCCTGAATGACACGGTAGGGAAGAAGATTGTTGTTGACTTCCTTGGTTTCAACTGGAACTGGATCAACAAGCAGCAAGCCAAGAGAAACTGGGGACAGCTGACATCCAACCTGCTGCTCATAGGCATGGAGGgcaATGTGACACCAGCACATTACGACGAGCAGCAGAACTTCTTTGCACAGATCAAAGGCCATAAGAGGTGCATCCTCTTCCCTCCAGACCAGTTTGAGTGTCTCTATCCATACCCTGTGCACCACCCCTGTGACAGACAGAGCCAAgtTGATTTTGATCATCCTGATTTTAAGACGTTTCccaattttaaaaatgttgttgGCTATGAGGCTGTTGTGGGCCCAGGAGATGTGCTCTACATCCCGATGTATTGTGCAGGAGGGAttacaaacaaaagaacaaGACCCAAATCCAGCAGTACATTTTTGGGGAAGCTGTACCTACTTAGAAGCCACTCTGTGCCCTCGGCAAGCAGATCAGCGCGATCTTTGAGCGCATTGTTTGCCAAGTCTTCCCATAACGCAAGAGGTGCCTCCACACCCAAGAGGATAGAGTACCCCCTGAGGGCTCACCAGAAGGTGGCCATCATGAGAAATATTGAGAAAATGCTGGGAGAAGCACTTGGAGATCCACATGAGgTTGGACCTTTACTGAAAACGATGATCAAGGGGCGATATGACCATGATCTCGGTTAGAGCGCCACTCTTAAAAGAGTGACCTGGACTGCGGTGCAATCTTTTTGCCGCGTGAAAGTGAGACTGCTGCATGCGTAATGCGCATTCTGGCTTTTTTAAGCATACGTATCACTGCACGGCAATAAGCAGCCACCTGAAAACCATTCTGCTTCAGTTGTCTCCGAGTGCCATGGTCATTGCAAATACATCTATCACAGAAGAAACATTGGACTAACTCAGTGGAATTCCACCTACTTGAagaagtctttttaaaaaaaatcttttgtctTTGAAAAGAAGGCCTCATTTGGATTAAGTCTAGATATATTTATGTAAATCAGTGTTCTCTCAACATTCTTAATTCAAGCTAGTGGGTTTTTGGGTGCATGCAAATGAAGTTGTAAGATCGGTACCTTTGGGACAACCTCAATATTTTGACCACTAATGGATGAGTCAAAGGGtattacatatacagtacacatcaGTTAGATACTTTCTTATATACATGTTCTAACACAGTTATGGATTGATTCCTTAGTGTGGAGTGATCATATTGTATTCTCCATCTTTAGCACTAATACAGCTTTAAAACTGTTTTGGTTCATACCTCTAAAGTTGACAGGTTTTTTAAGGGTCTTCTATAAATATATCCACATAATCTGCATTATCTCCACTCCTACTTACATGGTTTTGGGGAGTGAGCAGCAAGAATTTTCTGTTGCAAAGAAGACAGCATAGGCACGGTAATAAAACATAAGTACAGTGATTTTAAAACTGATGAAATATGTGTGGGTGGGGAAAAAAGGGGGCTCGTATATTCAGCTGAAGGAGTATGTGACTGCTTGCAGCTAAACTGTTTACCTGAGCGACGCTGCTTTGTGTTTATACATGCTCTTGCTTGTTTGATTTGTTTGACTTTATTGAATGTGCTATTCTGCGTACCAGTAATGAGGGTAAGATGAGGGGCACTGGAAATAAATGACATACTGCAATTTTAGTTGCAAATACAGGtaacttaaataaataaaataaaatacagtaagCCACTGTTGTTGGGAAGATTTTTCAGAGGAATTACCAGTGATGTTTTCTTAGGAATATGATGGTTAAAACTGTAAAAGTGGTTAACTTGAACTGCTTAAATGATAGATTTATGTAAAAATGTTATCAATGCACTGAACTAGCAGGACCATCTGCTGGGATGTAGCTTATGTACCAGCCATTGCAGCGCAACACAATGTACCATCTAGTGGTGAAGTTGTATAGTTACCTGGTCCATGCACTATACTGCTGCAATACAAATATTCAACGTGCTATATTGAACGCAGCAGATCTGGGATGAAATGACAAAAGTCTAATTTCAGTTGGAAACGTGTACTTGGTCAGTGATCCTCAGACATGCACTTATTTTTACTCACATGCAGCCATATTTTGAAGACCTTAAAGAGAGCAAGATGGCGGTTTCTGTGCACATTTAAAGTGCTCTCCTGAACTGttgtaaaaaatatacattGAACAAAAAGAGGATAATTTCACGTTGTGCTGTATGTGCCAAACCAACATACAAAGCAGTAGATGGGTATCTGTATTCAGAAAGGAATATCCATGCACTAAATTTACCAGGAATACACGTTCAGGTGTTTTGTTATGATTAACCTTTAGATTGTTGATAACGTGCATATCTATTTCTTACAAATTGCACAATGATGGAACAGGGATACTTCCTCTGTAAAATAATGACATACCTGATGTGGGACTGATGTTTCATCTCTCTCTTAAATTGCTAGGTTAACCCTGTTTACTGTATGTGCCTTGTTTAAAAGCGGCATGGCACTAAATGTTGCAACAACTTgatttggaattttttttattttatggtcaaaatgttttcactctggCATTAAATCGCTTTAAAGGTAGGATTGACATGGTTCATAGCGATCAAGGCATGTTTTTATTGATGGATGCCTGTTTTCAACGTACAGTATGTGCTCTCCTTGTTCCTCTGATTAAAGTTTGTTTGCAAAGTTCTA

Function

symbol description
hif1an Predicted to enable several functions, including 2-oxoglutarate-dependent dioxygenase activity; ankyrin repeat binding activity; and transition metal ion binding activity. Acts upstream of or within negative regulation of vasculature development and regulation of vascular endothelial growth factor receptor signaling pathway. Predicted to be located in perinuclear region of cytoplasm. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including alar plate midbrain region; central nervous system; immature eye; midbrain hindbrain boundary neural rod; and midbrain neural keel. Orthologous to human HIF1AN (hypoxia inducible factor 1 subunit alpha inhibitor).

NR:

description
PREDICTED: hypoxia-inducible factor 1-alpha inhibitor

GO: NA

KEGG:

id description
K18055 HIF1AN; hypoxia-inducible factor 1-alpha inhibitor (HIF hydroxylase)

RNA

RNA id representative length rna type GC content exon number start site end site
TU263818 False 2182 lncRNA 0.38 2 16656578 16659077
XM_039784733.1 True 3402 mRNA 0.42 8 16649868 16659075

Neighbor

gene id symbol gene type direction distance location
wnt8b wnt8b,LOC103355142,LOC104944325 coding upstream 4729 16639702 ~ 16645139 (+)
scdb LOC104930481,LOC104944327,LOC103355141 coding upstream 13047 16628572 ~ 16636821 (+)
LOC120547697 NA coding upstream 37179 16611277 ~ 16612689 (+)
tysnd1 tysnd1 coding upstream 73631 16572238 ~ 16576237 (+)
sar1ab LOC104930554,LOC104956665 coding upstream 78069 16567272 ~ 16571799 (+)
cdhr1a LOC102200236,LOC102293321,LOC101466539,LOC100690479,LOC108242829,LOC101155712,LOC106515358,LOC106904704,LOC103147748 coding downstream 205515 16864592 ~ 16877432 (+)
rgra rgr,LOC101074252,LOC104942455 coding downstream 244298 16903375 ~ 16911055 (+)
slc18a3a slc18a3,LOC102786515,LOC102201752,LOC105416362 coding downstream 264224 16923301 ~ 16925934 (+)
chata chat coding downstream 267472 16926549 ~ 16934687 (+)
c19h10orf53 LOC102787124,LOC104962667 coding downstream 276488 16935565 ~ 16936053 (+)
G194261 LOC104930511,LOC102783363,LOC103355139 non-coding upstream 31276 16616810 ~ 16618592 (+)
G194257 NA non-coding upstream 36025 16608474 ~ 16613843 (+)
G194254 LOC103355137,LOC104930531 non-coding upstream 44808 16591475 ~ 16605060 (+)
G194231 rps24,LOC102780737 non-coding upstream 96380 16547481 ~ 16553488 (+)
LOC120548058 NA non-coding upstream 290506 16357895 ~ 16359362 (+)
G194375 NA non-coding downstream 379209 17038286 ~ 17039656 (+)
G194445 NA non-coding downstream 604845 17263922 ~ 17289530 (+)
G194451 NA non-coding downstream 641364 17300441 ~ 17302122 (+)
G194469 NA non-coding downstream 747798 17406875 ~ 17409080 (+)
G194485 NA non-coding downstream 772494 17431571 ~ 17431863 (+)
trmt2b trmt2b other upstream 24771 16620024 ~ 16625097 (+)
G194185 NA other upstream 296037 16353191 ~ 16353831 (+)
lrmda clg13h10orf11,LOC102312243,LOC101474007,LOC106515339,LOC102208092 other upstream 520201 15912762 ~ 16129667 (+)
LOC120548468 NA other upstream 846353 15794970 ~ 15803515 (+)
zgc:91976 sgms1 other upstream 1415993 15209839 ~ 15233875 (+)
G194325 LOC102785938,LOC102201169,LOC100696907,LOC101467692,LOC101074032 other downstream 230323 16889400 ~ 16890950 (+)
slc25a16 slc25a16 other downstream 826291 17485368 ~ 17494350 (+)
hpse2 hpse2,LOC102781816 other downstream 1400267 18059344 ~ 18115844 (+)
wu:fc17b08 LOC103355820 other downstream 1491654 18150731 ~ 18197092 (+)
prdm8 LOC104947267,LOC103357713 other downstream 2021880 18680957 ~ 18684337 (+)

Expression


Co-expression Network