G199942


Basic Information

Item Value
gene id G199942
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 4125633 ~ 4126336 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU271025
ggcgcagatgataatgctgcgttcattccaccaccaccttggaataacggcaccgcttccacctgcacgatccgttctgcgcatgcgcaagatgttcacacgctagcctccagctaacgttagttagctaatagctaattcggcggaccgctaggtgattatagcggtctgccgttagcctcccccgggaagctaacgttagtttagctaacggttaattcggcggaccgctaggtgattatagcggtctgccgttagcctccaccgggaagctaacgttaactagtttagctaacggttaatttggctaaccgctagctgattgcagcggtctgccgttagcctccacagttaagctaacgttagtttagctaacagctaattcggctaaccgctagctgagacagcatgtaaactttaaaagaccctcaaaataaaacttgaaaataaacgttaacatatataacagctgttacgtcagttctactttacttgtgctcatttaaaatacaatcactcaatacttgtctttattgttattactgtaatgtcttaatttagctgtagcttgcttttcccattaagtttaacttaacgttattttagactgaatctagctgcagaaacaacgtaaccagtggggcggtgcctgttatttcgaggtggcttgaacgcagcattatcatctgcgcctacgtcatggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271025 True 704 lncRNA 0.45 1 4125633 4126336

Neighbor

gene id symbol gene type direction distance location
vrk1 vrk1 coding upstream 602801 3501371 ~ 3522832 (+)
ak7b NA coding upstream 741029 3369799 ~ 3384604 (+)
LOC120548881 NA coding upstream 780049 3344816 ~ 3345584 (+)
im:7136021 LOC103129910,LOC103458072,LOC108228217 coding upstream 850762 3259535 ~ 3274871 (+)
yipf6 yipf6,LOC102784508 coding upstream 882171 3238623 ~ 3243462 (+)
dio2 LOC103376235 coding downstream 272314 4398650 ~ 4421094 (+)
LOC120549660 NA coding downstream 301476 4427812 ~ 4484962 (+)
alkbh1 alkbh1 coding downstream 940365 5066701 ~ 5081160 (+)
ldah ldah coding downstream 1068733 5195069 ~ 5224004 (+)
LOC120548885 NA coding downstream 1142452 5268788 ~ 5269687 (+)
G199924 NA non-coding upstream 313317 3812061 ~ 3812316 (+)
LOC120549606 NA non-coding upstream 369891 3750890 ~ 3755742 (+)
G199882 NA non-coding upstream 670665 3449558 ~ 3454968 (+)
G199849 NA non-coding upstream 781041 3337003 ~ 3344592 (+)
LOC120549373 NA non-coding upstream 805295 3316535 ~ 3320338 (+)
G199950 NA non-coding downstream 89628 4215964 ~ 4216402 (+)
G199953 NA non-coding downstream 119441 4245777 ~ 4251985 (+)
LOC120548712 NA non-coding downstream 208307 4334643 ~ 4336340 (+)
G199976 NA non-coding downstream 221325 4347661 ~ 4348476 (+)
G199993 NA non-coding downstream 303443 4429779 ~ 4430059 (+)
G199885 NA other upstream 601744 3496080 ~ 3523889 (+)
G199689 NA other upstream 1432180 2692473 ~ 2693453 (+)
G199652 NA other upstream 1577094 2547985 ~ 2548539 (+)
G199564 NA other upstream 1966250 2158890 ~ 2159383 (+)
LOC120549526 NA other upstream 3024229 1099584 ~ 1101404 (+)
LOC120549013 NA other downstream 896322 5022658 ~ 5024934 (+)
G200129 NA other downstream 915623 5041959 ~ 5053742 (+)
apoba NA other downstream 974132 5100468 ~ 5187407 (+)
LOC120549411 LOC102788407 other downstream 1447086 5573422 ~ 5715127 (+)
LOC120549412 NA other downstream 1588881 5715217 ~ 5718108 (+)

Expression


Co-expression Network