LOC120549660


Basic Information

Item Value
gene id LOC120549660
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 4427812 ~ 4484962 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039786714.1
CTCAAAAAGTGGACGCTGTTGATGCACGGTGTCCAGCAGGAGTTCTATGGAGAAGAGTTAAAATGTTTGGGAGATGAGATTCAGCTCTCAAAAAAGAGTCCACTGAGAAAGTTAAATCCTTTCATCGACGAGGATGGACTCCTTCGGATTGGAGGACGCCTTACCAACGCTGACTTACCCAGCGACGAGAGACATCCTGTCATACTGCCCAAAACTCATCACAATTCAACTCTAATAGTGAGACATTACCATGAGGATGTTTTCCATCAAGGTCGTCATCTTACTGAAGGTGCCGTCCGGTCAGCAGGAGTGTGGATAGTGGGAGGTAAATGGCTGGTTTCAAGTGTTATCTATAACTTTGTGACCTGCAAGAAACTGAGAGGGAGGTTGATGGAGCACGAAATGGCACCACTACCAGCTGACAGACTCACCTCAGAACCCCCTTTTACCCATGTCGGTCTGGACGTCTTTGGACCATGGAGCATTGTCACTCGGCGCACTCGTGGAGGTAGTGCTGAAAGTAAGCGATGGGCAGTGTTATTCACATGCATGAGCACGAGAGCGACACACATCGAAGTGTTAGAATCCATGTCCACTTCAAGTTTTATAAATGCCTTACGCCGATTCTTTGCTATCCGTGGGTCATCCAAACAGCTTCGCTCCGACAGAGGCACAAACTTTATTGGAGTGTGCAAAGAGTTAAAATTCAACACCAGTGATCCAGAACTGACAAGTTTTCTTGACAAGCAGGGATGCACGTGGACTTTCAACTATCCCCATTCATCCCATATGGGAGGTTGTTGGGAAAGACTGATAGGAGTAGCACATTGCATTCTAGAAGGGATGTTGCTGCAGTCTGACACGAAACACCTCACACATGAAGTGTTGACGACGCTGATGGCAGAAGTCATGGCCATTCTTAATGCCAGGCCATTGATTCCAGTGTCAACTGACTCTGACAATCTAACAATATTGACACCTGCAATGATTCTCACTCAAAAGATAACTCCAGTGACAGCGCCAGGGGACTTTGATCATAAGGATCTTCACAAAAATCAGTGGAAACAAGTGCAGTGTCTGGCAGAGAGCTTTTGGAAACGATGGAGACAAGTGGACTGATGACAACCCAAACATACAAGTAGATGATGTAGTTCTGATGAAAGACAGTCAGGCTAAACGGAATGACTGGCCAATTGGACTTGTGGTAAAGACATTGCCTAGCAAAGACAAGAAAGTCCGCAAGGTTGAAGTTAAAGTTGTGAGGCAAGGATCAACAAAAACTTACATCAGACCCATCTCAGAGCTTGTTTTTCTTATGTCTAAGGACTCATAAAGTGATGGACATTCTGATACGTAATAATACCGTTCATGAATGTAATTAGTGATTGATTGTATATTGTTTTGTTGATTAATTTTTGAGTAATTAAGATGTTGATAGTGGTATAATAATATACCAGGCGAGGAGTGTTCCGCCCTTCAGCGTTTAGTTCGTTTCCTAGTCGGACCCGTTTTAGTGACGGACCTAATGTTCGAGCCGAGCAACAGCGCTGAAATCACCCATGAGTCTGCGTCATTACAGAGTTTGGTCAAATCTTTgtctCGTACCAGCACCGGAAGCTGTCACAGATTTGAATAATAGAGTGCTCACAAATAACCTCGTGTCCATAATGAACATGGATGTGACAAGCTGCCATTCAAAAGAATGGAACTTTATAAGGTCATGATAGGTGCCATCCAGAAGTCACAACCCGGCATCACAGAAGCTTCCATTGGTAGCCTGATGGCCAACCATTTGCGCGCTGCACCGGACAGAAGAAGGGGCACTGGGTGCTGGAAGGCACTTGAAATCTCTGGAAGTGTGAATGCATAGCGCCCCCACTGTATTACACTgctcaaaaaaattaaataaaaacatatcagA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039786714.1 True 1921 mRNA 0.45 5 4427812 4484962

Neighbor

gene id symbol gene type direction distance location
dio2 LOC103376235 coding upstream 6718 4398650 ~ 4421094 (+)
vrk1 vrk1 coding upstream 904980 3501371 ~ 3522832 (+)
ak7b NA coding upstream 1043208 3369799 ~ 3384604 (+)
LOC120548881 NA coding upstream 1082228 3344816 ~ 3345584 (+)
im:7136021 LOC103129910,LOC103458072,LOC108228217 coding upstream 1152941 3259535 ~ 3274871 (+)
alkbh1 alkbh1 coding downstream 581739 5066701 ~ 5081160 (+)
ldah ldah coding downstream 710107 5195069 ~ 5224004 (+)
LOC120548885 NA coding downstream 783826 5268788 ~ 5269687 (+)
LOC120549592 LOC104922054 coding downstream 786197 5271159 ~ 5271788 (+)
LOC120548886 syne2,LOC104943765 coding downstream 892036 5376998 ~ 5570547 (+)
G199976 NA non-coding upstream 79336 4347661 ~ 4348476 (+)
LOC120548712 NA non-coding upstream 91472 4334643 ~ 4336340 (+)
G199953 NA non-coding upstream 175827 4245777 ~ 4251985 (+)
G199950 NA non-coding upstream 211410 4215964 ~ 4216402 (+)
G199942 NA non-coding upstream 301476 4125633 ~ 4126336 (+)
G200022 NA non-coding downstream 10400 4495362 ~ 4496423 (+)
LOC120549661 NA non-coding downstream 156596 4641558 ~ 4651197 (+)
G200083 NA non-coding downstream 283269 4768231 ~ 4768470 (+)
G200089 NA non-coding downstream 324782 4809744 ~ 4809949 (+)
G200092 NA non-coding downstream 328033 4812995 ~ 4813600 (+)
G199885 NA other upstream 903923 3496080 ~ 3523889 (+)
G199689 NA other upstream 1734359 2692473 ~ 2693453 (+)
G199652 NA other upstream 1879273 2547985 ~ 2548539 (+)
G199564 NA other upstream 2268429 2158890 ~ 2159383 (+)
LOC120549526 NA other upstream 3326408 1099584 ~ 1101404 (+)
LOC120549013 NA other downstream 537696 5022658 ~ 5024934 (+)
G200129 NA other downstream 556997 5041959 ~ 5053742 (+)
apoba NA other downstream 615506 5100468 ~ 5187407 (+)
LOC120549411 LOC102788407 other downstream 1088460 5573422 ~ 5715127 (+)
LOC120549412 NA other downstream 1230255 5715217 ~ 5718108 (+)

Expression


Co-expression Network