G200226


Basic Information

Item Value
gene id G200226
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 5225234 ~ 5225453 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU271355
AGGGGATTCCCTGTCTCCCTAACATGGAAGTGACTGCAACAATTCGCCttactctcttctctctctctcgctatcTCACTTGCTATCATCTGTGCAAcgtctccctgtccctctcattcatcaaaaatgagtctacacatcaagacaaccatcatagtctaataataataataatgaagcgaaaacattttcaaaatttcaaattttCACATAAAAGGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271355 True 220 lncRNA 0.39 1 5225234 5225453

Neighbor

gene id symbol gene type direction distance location
ldah ldah coding upstream 1230 5195069 ~ 5224004 (+)
alkbh1 alkbh1 coding upstream 144074 5066701 ~ 5081160 (+)
LOC120549660 NA coding upstream 740272 4427812 ~ 4484962 (+)
dio2 LOC103376235 coding upstream 804140 4398650 ~ 4421094 (+)
vrk1 vrk1 coding upstream 1702402 3501371 ~ 3522832 (+)
LOC120548885 NA coding downstream 43335 5268788 ~ 5269687 (+)
LOC120549592 LOC104922054 coding downstream 45706 5271159 ~ 5271788 (+)
LOC120548886 syne2,LOC104943765 coding downstream 151545 5376998 ~ 5570547 (+)
LOC120548986 btbd6,LOC104965074,LOC101483787 coding downstream 1196284 6421737 ~ 6426044 (+)
bag5 bag5 coding downstream 1344733 6570186 ~ 6587823 (+)
G200207 NA non-coding upstream 45259 5179757 ~ 5179975 (+)
G200198 NA non-coding upstream 54052 5170968 ~ 5171182 (+)
G200195 NA non-coding upstream 56128 5168749 ~ 5169106 (+)
G200191 NA non-coding upstream 59804 5164976 ~ 5165430 (+)
G200189 NA non-coding upstream 61195 5163599 ~ 5164039 (+)
G200227 LOC106581682,LOC106584751,LOC106584250,LOC106593362,LOC106579430 non-coding downstream 3831 5229284 ~ 5229737 (+)
G200230 LOC106609078,LOC106584250,LOC106593362,LOC106584751,LOC106581682 non-coding downstream 4335 5229788 ~ 5230859 (+)
G200233 LOC107373952,LOC106910133,LOC107834262,LOC106939220,LOC104944801,LOC103398986 non-coding downstream 9901 5235354 ~ 5235648 (+)
G200234 LOC107834262,LOC106910133,LOC106939220,LOC103398986 non-coding downstream 10217 5235670 ~ 5235946 (+)
G200240 NA non-coding downstream 62935 5288388 ~ 5288737 (+)
apoba NA other upstream 37827 5100468 ~ 5187407 (+)
G200129 NA other upstream 171492 5041959 ~ 5053742 (+)
LOC120549013 NA other upstream 200300 5022658 ~ 5024934 (+)
G199885 NA other upstream 1701345 3496080 ~ 3523889 (+)
G199689 NA other upstream 2531781 2692473 ~ 2693453 (+)
LOC120549411 LOC102788407 other downstream 347969 5573422 ~ 5715127 (+)
LOC120549412 NA other downstream 489764 5715217 ~ 5718108 (+)
G200452 NA other downstream 1342823 6568276 ~ 6571757 (+)
G200492 NA other downstream 1452205 6677658 ~ 6682591 (+)
vps29 eif5,vps29,LOC107595689 other downstream 1506795 6732248 ~ 6747402 (+)

Expression


Co-expression Network