LOC120550058


Basic Information

Item Value
gene id LOC120550058
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 6822113 ~ 6822319 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637545.1
AAGACTATACTTTCAGGGATCATTTCTTTAGTTGTAGACTTGAGAAATGTGTTTCTAAAGAGTTTGGTCTTGCTGCCCATGATGAAGAGTTGAGATGTTTTCTTCAGAGCAGGAAACTGGTGGGAGGACTTTGTTTCTTCTCCACTGTTGAAGACTGTTCAGAGTTTCTCAGAGAGACTCTGAAGGAGGAAATATGATCTGAGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637545.1 True 207 snoRNA 0.41 1 6822113 6822319

Neighbor

gene id symbol gene type direction distance location
LOC120549784 NA coding upstream 29590 6772127 ~ 6792523 (+)
ckba ckb,LOC107698148 coding upstream 163512 6650792 ~ 6658601 (+)
bag5 bag5 coding upstream 234290 6570186 ~ 6587823 (+)
LOC120548986 btbd6,LOC104965074,LOC101483787 coding upstream 396069 6421737 ~ 6426044 (+)
LOC120548886 syne2,LOC104943765 coding upstream 1251566 5376998 ~ 5570547 (+)
LOC120550062 NA coding downstream 936 6823255 ~ 6823461 (+)
LOC120550056 NA coding downstream 6454 6828773 ~ 6828979 (+)
LOC120550064 NA coding downstream 11699 6834018 ~ 6834225 (+)
LOC120550063 NA coding downstream 15482 6837801 ~ 6838007 (+)
LOC120550046 NA coding downstream 18150 6840469 ~ 6840675 (+)
G200501 NA non-coding upstream 19052 6802139 ~ 6803061 (+)
G200498 mark3 non-coding upstream 96390 6715936 ~ 6725723 (+)
G200484 NA non-coding upstream 187609 6632485 ~ 6634504 (+)
G200455 NA non-coding upstream 223721 6597774 ~ 6598392 (+)
G200450 NA non-coding upstream 226295 6592416 ~ 6595818 (+)
G200569 NA non-coding downstream 38315 6860634 ~ 6861052 (+)
G200571 NA non-coding downstream 42006 6864325 ~ 6864824 (+)
G200602 NA non-coding downstream 150786 6973105 ~ 6987231 (+)
LOC120549536 NA non-coding downstream 165686 6988005 ~ 7017657 (+)
G200610 NA non-coding downstream 204906 7027225 ~ 7027496 (+)
LOC120549783 NA other upstream 53451 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 74711 6732248 ~ 6747402 (+)
G200492 NA other upstream 139522 6677658 ~ 6682591 (+)
G200452 NA other upstream 250356 6568276 ~ 6571757 (+)
LOC120549412 NA other upstream 1104005 5715217 ~ 5718108 (+)
LOC120550068 NA other downstream 77820 6900139 ~ 6900344 (+)
G201057 dcaf10,LOC102795877 other downstream 2398322 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 2768851 9591170 ~ 9604625 (+)
G201287 NA other downstream 2886545 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 3113417 9935736 ~ 10007687 (+)

Expression


Co-expression Network