LOC120550068


Basic Information

Item Value
gene id LOC120550068
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 6900139 ~ 6900344 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637554.1
aagacataactTTCAGAGAATCATCTTTAGTTGTTGACTTAAGAAATGTGTTTCTAAAGAGTTTGGTCTCACTTCCCACAATGAAGAGTTGAGATGTTTCCTTCAGAGCAGGAAACTGGTGGGAAGACTTTGTTTCTTCACCACTGTTGAAGACTTTTCAGAGTTTCTCAGAGAGATTCTGAAGGAGGAAACATGATCTGAGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637554.1 True 206 snoRNA 0.39 1 6900139 6900344

Neighbor

gene id symbol gene type direction distance location
LOC120550044 NA coding upstream 5717 6894216 ~ 6894422 (+)
LOC120550052 NA coding upstream 11222 6888711 ~ 6888917 (+)
LOC120550047 NA coding upstream 12583 6887350 ~ 6887556 (+)
LOC120550053 NA coding upstream 15378 6884554 ~ 6884761 (+)
LOC120550070 NA coding upstream 16573 6883360 ~ 6883566 (+)
LOC120549537 ahsa1,LOC103354751 coding downstream 158034 7058378 ~ 7065785 (+)
LOC120549540 LOC104958255 coding downstream 171756 7072100 ~ 7092651 (+)
larp1b LOC103354752 coding downstream 198096 7098440 ~ 7139983 (+)
pgrmc2 pgrmc2 coding downstream 240938 7141282 ~ 7153826 (+)
asmt2 asmt,LOC103354763,LOC100692897,LOC102199344,LOC102295279,LOC101473716 coding downstream 259144 7159488 ~ 7171856 (+)
G200571 NA non-coding upstream 35315 6864325 ~ 6864824 (+)
G200569 NA non-coding upstream 39087 6860634 ~ 6861052 (+)
G200501 NA non-coding upstream 97078 6802139 ~ 6803061 (+)
G200498 mark3 non-coding upstream 174416 6715936 ~ 6725723 (+)
G200484 NA non-coding upstream 265635 6632485 ~ 6634504 (+)
G200602 NA non-coding downstream 72761 6973105 ~ 6987231 (+)
LOC120549536 NA non-coding downstream 87661 6988005 ~ 7017657 (+)
G200610 NA non-coding downstream 126881 7027225 ~ 7027496 (+)
G200611 NA non-coding downstream 131377 7031721 ~ 7031929 (+)
G200613 NA non-coding downstream 136089 7036433 ~ 7037744 (+)
LOC120549783 NA other upstream 131477 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 152737 6732248 ~ 6747402 (+)
G200492 NA other upstream 217548 6677658 ~ 6682591 (+)
G200452 NA other upstream 328382 6568276 ~ 6571757 (+)
LOC120549412 NA other upstream 1182031 5715217 ~ 5718108 (+)
G201057 dcaf10,LOC102795877 other downstream 2320297 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 2690826 9591170 ~ 9604625 (+)
G201287 NA other downstream 2808520 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 3035392 9935736 ~ 10007687 (+)
LOC120549492 NA other downstream 3141681 10042025 ~ 10044094 (+)

Expression


Co-expression Network