G200613


Basic Information

Item Value
gene id G200613
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 7036433 ~ 7037744 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU271830
GGCAGTTTGGGTATTTTTTACTGTATTATTGAATAAAATCTATAAAATattccacaaaaaaatacaatacattattaTCATCGTATTACCATCCTTCAGTTGCATTTTTCTCATTATcagcaacaacaacatacaGCTTGTGCTTTACAGACCCTACTGACACTCTCATACAATTATAAATAACACTGCAGCTTTCTGCTTTTTGTATTCAGTCCGGTCAGGTAAATtatacaaattaaaaagaaaaacaacaaaagagaaGTGGTTTTATTTCAGAGGCTGAAATCCAACAGATTCACACTGAATTTCTGTGCAGAGCCATTAGGAGCAAAAACAAGTTGttggagcagcagcagtgtgctCCTCATACATCTCATGTGATTGGTCGGTGGTCTGAGTCTGGGCAAAACAAGCTCTAAACCCCTCCTACTGAACAAGTGACGCAAGCTGCTTCCTCCCACCCCTCCTCTTATTTTTCCCTCCTGGCCCTCGCTGCCACCTCCTCCCTCAGCTAGTTTTCTGTCATCCTGTCAGGATACATTAAGCTCATATGCCACTAGTGTTCACCgagcacagaaaaaaaggcaGAGAAGAGGGAAGAAACGATGGCGGTTTGGGCTTTTAGTGCTTCCCCACAGTTCTTAGGGTTTTATCAATGAAGCTGGAGCTCAGAGAAGCACATAAACCTCGACGTGAATAAAAAATTAGGGTCAGTAGTAAGGCACGTTGTCGACATGAGATGAGGACGGATTGCTTTGGTGTGACAGGAAAGCACTGGATTCCATTGGATTGGAATTTCAGCTGAGTTAAAAtggatgaaaaatgaaaaaaactaaatggtaCTATCAGTGACAGAAAGGAGTGTTCAGGTAAACCAACAACAGACATCAGGAGGTAGTACAGGAGTAAACTACAGATAGTGAAGGTCCAACATCTGCTTCATTGCAGCCCATTGCAGCAACCCTTCACTCACTGTATCTCTTCTAATAGACAGGTGATTGGAGTTTCAGGTAGAAACACGTATGAAAAAGTTTTTGAAAACTCCCAACATTGCAATAAAACTCCATACCATCATGGCCATAATAATACATAGGCTTCTGTTGTCATTTACAACAGACATGGCATAGTAGTCCTGATTGTTGACTTGAGGCGATCAGCTCCTCAGTCAGAACCAGACTGTGATTACATTACTATTTAAAATACAGGTTTTATGCGGCGTTCATGACATGTTGGATTTACCGTAAAATACAAGCTGCCGAGAAGGATAAAACTGTTCACATCAACCGTCTGGTGAAAGGATGATTATATTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271830 True 1312 lncRNA 0.40 1 7036433 7037744

Neighbor

gene id symbol gene type direction distance location
LOC120550044 NA coding upstream 142011 6894216 ~ 6894422 (+)
LOC120550052 NA coding upstream 147516 6888711 ~ 6888917 (+)
LOC120550047 NA coding upstream 148877 6887350 ~ 6887556 (+)
LOC120550053 NA coding upstream 151672 6884554 ~ 6884761 (+)
LOC120550070 NA coding upstream 152867 6883360 ~ 6883566 (+)
LOC120549537 ahsa1,LOC103354751 coding downstream 20634 7058378 ~ 7065785 (+)
LOC120549540 LOC104958255 coding downstream 34356 7072100 ~ 7092651 (+)
larp1b LOC103354752 coding downstream 60696 7098440 ~ 7139983 (+)
pgrmc2 pgrmc2 coding downstream 103538 7141282 ~ 7153826 (+)
asmt2 asmt,LOC103354763,LOC100692897,LOC102199344,LOC102295279,LOC101473716 coding downstream 121744 7159488 ~ 7171856 (+)
G200611 NA non-coding upstream 4504 7031721 ~ 7031929 (+)
G200610 NA non-coding upstream 8937 7027225 ~ 7027496 (+)
LOC120549536 NA non-coding upstream 18776 6988005 ~ 7017657 (+)
G200602 NA non-coding upstream 49202 6973105 ~ 6987231 (+)
G200571 NA non-coding upstream 171609 6864325 ~ 6864824 (+)
G200615 NA non-coding downstream 59192 7096936 ~ 7171856 (+)
G200626 NA non-coding downstream 90431 7128175 ~ 7129122 (+)
G200618 NA non-coding downstream 154827 7192571 ~ 7194634 (+)
G200704 NA non-coding downstream 223653 7261397 ~ 7261785 (+)
G200717 NA non-coding downstream 300602 7338346 ~ 7344002 (+)
LOC120550068 NA other upstream 136089 6900139 ~ 6900344 (+)
LOC120549783 NA other upstream 267771 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 289031 6732248 ~ 6747402 (+)
G200492 NA other upstream 353842 6677658 ~ 6682591 (+)
G200452 NA other upstream 464676 6568276 ~ 6571757 (+)
G201057 dcaf10,LOC102795877 other downstream 2182897 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 2553426 9591170 ~ 9604625 (+)
G201287 NA other downstream 2671120 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 2897992 9935736 ~ 10007687 (+)
LOC120549492 NA other downstream 3004281 10042025 ~ 10044094 (+)

Expression


Co-expression Network