LOC120550047


Basic Information

Item Value
gene id LOC120550047
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 6887350 ~ 6887556 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637535.1
AAGACTATACTTTCAGGGATCATTTCTTTAGTTGTTGACTTGAGAAATGTGTTTCTAAAGAGTTTGGTCTCGCTGCCCACGATGAAGAGTTGAGATGTTTCCTTCAGAGCAGGAAACTGGTGGGAAGACTTTGTTTCTTCTCCACTGTTGAAGACTGTTCAGAGATTCTCAGAGAGACTCTGAAGGAGGAAACATGTTCTGAGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637535.1 True 207 snoRNA 0.42 1 6887350 6887556

Neighbor

gene id symbol gene type direction distance location
LOC120550053 NA coding upstream 2589 6884554 ~ 6884761 (+)
LOC120550070 NA coding upstream 3784 6883360 ~ 6883566 (+)
LOC120550045 NA coding upstream 28423 6858721 ~ 6858927 (+)
LOC120550042 NA coding upstream 31083 6856061 ~ 6856267 (+)
LOC120550069 NA coding upstream 32253 6854891 ~ 6855097 (+)
LOC120550052 NA coding downstream 1155 6888711 ~ 6888917 (+)
LOC120550044 NA coding downstream 6660 6894216 ~ 6894422 (+)
LOC120549537 ahsa1,LOC103354751 coding downstream 170822 7058378 ~ 7065785 (+)
LOC120549540 LOC104958255 coding downstream 184544 7072100 ~ 7092651 (+)
larp1b LOC103354752 coding downstream 210884 7098440 ~ 7139983 (+)
G200571 NA non-coding upstream 22526 6864325 ~ 6864824 (+)
G200569 NA non-coding upstream 26298 6860634 ~ 6861052 (+)
G200501 NA non-coding upstream 84289 6802139 ~ 6803061 (+)
G200498 mark3 non-coding upstream 161627 6715936 ~ 6725723 (+)
G200484 NA non-coding upstream 252846 6632485 ~ 6634504 (+)
G200602 NA non-coding downstream 85549 6973105 ~ 6987231 (+)
LOC120549536 NA non-coding downstream 100449 6988005 ~ 7017657 (+)
G200610 NA non-coding downstream 139669 7027225 ~ 7027496 (+)
G200611 NA non-coding downstream 144165 7031721 ~ 7031929 (+)
G200613 NA non-coding downstream 148877 7036433 ~ 7037744 (+)
LOC120549783 NA other upstream 118688 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 139948 6732248 ~ 6747402 (+)
G200492 NA other upstream 204759 6677658 ~ 6682591 (+)
G200452 NA other upstream 315593 6568276 ~ 6571757 (+)
LOC120549412 NA other upstream 1169242 5715217 ~ 5718108 (+)
LOC120550068 NA other downstream 12583 6900139 ~ 6900344 (+)
G201057 dcaf10,LOC102795877 other downstream 2333085 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 2703614 9591170 ~ 9604625 (+)
G201287 NA other downstream 2821308 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 3048180 9935736 ~ 10007687 (+)

Expression


Co-expression Network