LOC120550052


Basic Information

Item Value
gene id LOC120550052
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 6888711 ~ 6888917 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637539.1
AAGATTATACTTTCAGGGATCATTTCTTTAGTTGTTGACTTGAGAAATGTGTTTCTAATGAGTTTGGTCTCGCTGCCCACGATGAAGAGTTGAGATGTTTCCTTCAGAGCAGGAAACTGGTGGGAAGACTTTGTTTCTTCTCCACTGTTGAAGACTGTTCAGAGATTCTCAGAGAGACTCTGAAGGAGGAAACATGTTCTGAGTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637539.1 True 207 snoRNA 0.42 1 6888711 6888917

Neighbor

gene id symbol gene type direction distance location
LOC120550047 NA coding upstream 1155 6887350 ~ 6887556 (+)
LOC120550053 NA coding upstream 3950 6884554 ~ 6884761 (+)
LOC120550070 NA coding upstream 5145 6883360 ~ 6883566 (+)
LOC120550045 NA coding upstream 29784 6858721 ~ 6858927 (+)
LOC120550042 NA coding upstream 32444 6856061 ~ 6856267 (+)
LOC120550044 NA coding downstream 5299 6894216 ~ 6894422 (+)
LOC120549537 ahsa1,LOC103354751 coding downstream 169461 7058378 ~ 7065785 (+)
LOC120549540 LOC104958255 coding downstream 183183 7072100 ~ 7092651 (+)
larp1b LOC103354752 coding downstream 209523 7098440 ~ 7139983 (+)
pgrmc2 pgrmc2 coding downstream 252365 7141282 ~ 7153826 (+)
G200571 NA non-coding upstream 23887 6864325 ~ 6864824 (+)
G200569 NA non-coding upstream 27659 6860634 ~ 6861052 (+)
G200501 NA non-coding upstream 85650 6802139 ~ 6803061 (+)
G200498 mark3 non-coding upstream 162988 6715936 ~ 6725723 (+)
G200484 NA non-coding upstream 254207 6632485 ~ 6634504 (+)
G200602 NA non-coding downstream 84188 6973105 ~ 6987231 (+)
LOC120549536 NA non-coding downstream 99088 6988005 ~ 7017657 (+)
G200610 NA non-coding downstream 138308 7027225 ~ 7027496 (+)
G200611 NA non-coding downstream 142804 7031721 ~ 7031929 (+)
G200613 NA non-coding downstream 147516 7036433 ~ 7037744 (+)
LOC120549783 NA other upstream 120049 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 141309 6732248 ~ 6747402 (+)
G200492 NA other upstream 206120 6677658 ~ 6682591 (+)
G200452 NA other upstream 316954 6568276 ~ 6571757 (+)
LOC120549412 NA other upstream 1170603 5715217 ~ 5718108 (+)
LOC120550068 NA other downstream 11222 6900139 ~ 6900344 (+)
G201057 dcaf10,LOC102795877 other downstream 2331724 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 2702253 9591170 ~ 9604625 (+)
G201287 NA other downstream 2819947 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 3046819 9935736 ~ 10007687 (+)

Expression


Co-expression Network