LOC120550044


Basic Information

Item Value
gene id LOC120550044
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 6894216 ~ 6894422 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637532.1
AAGACTATACTTTCAGGGATCATTTCTTTAGTTGTTGACTTGAGAAATGTGTTTCTAAAGAGTTTGGTCTCACTGCCCACGATGAAGAGTTGAGATGTTTCTTTCAGAGCAGGAAACTGGTGGGAAGACTTTGTTTCTTCTCCACTGTTGAAGACTGTTCAGAGTTTCTCATAGAGACTCTGAAGGAGGAAACATGATCTGAGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637532.1 True 207 snoRNA 0.41 1 6894216 6894422

Neighbor

gene id symbol gene type direction distance location
LOC120550052 NA coding upstream 5299 6888711 ~ 6888917 (+)
LOC120550047 NA coding upstream 6660 6887350 ~ 6887556 (+)
LOC120550053 NA coding upstream 9455 6884554 ~ 6884761 (+)
LOC120550070 NA coding upstream 10650 6883360 ~ 6883566 (+)
LOC120550045 NA coding upstream 35289 6858721 ~ 6858927 (+)
LOC120549537 ahsa1,LOC103354751 coding downstream 163956 7058378 ~ 7065785 (+)
LOC120549540 LOC104958255 coding downstream 177678 7072100 ~ 7092651 (+)
larp1b LOC103354752 coding downstream 204018 7098440 ~ 7139983 (+)
pgrmc2 pgrmc2 coding downstream 246860 7141282 ~ 7153826 (+)
asmt2 asmt,LOC103354763,LOC100692897,LOC102199344,LOC102295279,LOC101473716 coding downstream 265066 7159488 ~ 7171856 (+)
G200571 NA non-coding upstream 29392 6864325 ~ 6864824 (+)
G200569 NA non-coding upstream 33164 6860634 ~ 6861052 (+)
G200501 NA non-coding upstream 91155 6802139 ~ 6803061 (+)
G200498 mark3 non-coding upstream 168493 6715936 ~ 6725723 (+)
G200484 NA non-coding upstream 259712 6632485 ~ 6634504 (+)
G200602 NA non-coding downstream 78683 6973105 ~ 6987231 (+)
LOC120549536 NA non-coding downstream 93583 6988005 ~ 7017657 (+)
G200610 NA non-coding downstream 132803 7027225 ~ 7027496 (+)
G200611 NA non-coding downstream 137299 7031721 ~ 7031929 (+)
G200613 NA non-coding downstream 142011 7036433 ~ 7037744 (+)
LOC120549783 NA other upstream 125554 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 146814 6732248 ~ 6747402 (+)
G200492 NA other upstream 211625 6677658 ~ 6682591 (+)
G200452 NA other upstream 322459 6568276 ~ 6571757 (+)
LOC120549412 NA other upstream 1176108 5715217 ~ 5718108 (+)
LOC120550068 NA other downstream 5717 6900139 ~ 6900344 (+)
G201057 dcaf10,LOC102795877 other downstream 2326219 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 2696748 9591170 ~ 9604625 (+)
G201287 NA other downstream 2814442 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 3041314 9935736 ~ 10007687 (+)

Expression


Co-expression Network