LOC120549784


Basic Information

Item Value
gene id LOC120549784
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 6772127 ~ 6792523 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039786911.1
CGAGGGAGTTTCCTTCACTCAGCGGACAGCTCTGAGCTCAGAGAAGGCAGCAGAcagctctctcactctctcttctctctctggttATTTCTGCAACTCATCCCTCGTTGCGCTGCGACTAGCGACCTGCACACACAAAGGCTGATCCAAGACAAGCCAGGGGTGGGGgggagcaacagcagcagcacaacCACCACCTGCATAACCCTCCACCACCACCCTCCCTCCATCTAAACGGCCCAAGACCTTATCTCTGCTGCTGTCGCTACCACCACCTCATCATGTGCGACTGTTTCCGCCTGGTTTTCTCCAACTGGCATGCCCCCTCCTCGGGGACGGAAAAGCAACAGGCCGGTACCTGTTGTGACAACGTTGTGGCTCAGAACAATTCCAACAGGAACGAGGAACAACACCTGCAGAGTGAAGAACAGATCCGTCAGCAACTAACTGAACTTCTAGGTGTGGCCCCAGATGCCGACAACATACAAAGATATGTGTCCCAGCGCTTCCCAAAGCCACCGGTAGATGTGGACCAGAACCTCCCTCAGCACCTGTTAAATGTGCAGGAAACTATGCACAAAGACCTTGTAAAGCTGGGTCCCCTGTTTAAACCAATGGGGTTGATGGGATGTCTGATTGAAAGCTACCATCGTCAGACATTTGAACACCTCGATGATCTACTCAACAAAATCAGCTCCTCCAAGAATTGCTTTGCGCTGATGATGTGGCTCCGAGATACATATCTGAGTCAGGAGCTATGTGATCGGTCTGACCTGCAAGAAATGGATCCCATGAAAACAGTTGACATACTGCTGTTCACAGAGTGTGCAGCAAAAGCAAAGGACAAACTGCTGGAACATGTGAAGacagaggtcagagggatCCTTGAGGGAATCCTGCAGCatgagagaagcaaagaagCTTACAATGAACTTAATCTGGACACTATTCAGTGCATTGATGCCATGCACAGAACAGCACAAAACAGCAGCCAAAAACTCTCTGACTACGTGCAGGAGGTTTGTTTCCAAGAGCTGGGGATGTTTCTGAAGAGctacaccaCTATGCAGATTGAGATTCTTGAAGAGAAAGCAAAAATGGACAAACCAGAAACAAAACACTTCTTTAAGACTTTGAACAACTGTAATAAACTCGAGCAGTATGTCCAGACCAAAGCTAAAGGCATCCTTCTCAAGGAAACCAAAGACCATAGCCTCTTTGAGGAAACCATGGCAACGCTTAGAAACATGGAGGATTTTACTTTGGATCTTCTGATGAAAGTCGTAGCTAACACTGCAAAGAGCCACCTTAAGAGATACTTCAAATCAGACAGCAAGGAATTCTCTCTCCTAATCGACGAAGTAAAGAGTCTTTTCTCTGAGCTGTCATGCTGTCAGGATATAGGCCTACAAAAGAGAGTGATAGACGAGGCCTACAAGCTCATCGTTCACTATTACCTGAAATATCTTATCAAAATCAAAGAGAGCAAACTGAGAAAGTGCGGGAGTCCAAATGTTGGACAAACAGTCGCTAAGGATGCAGAGATTCTTCACGACACCTTCTCTGCCCTGGCTCCTGGTGTCCGACAGTGGAACCTCATGCTGCTGAAAGTCAAAGAACTGTTGGAGTGTGAAAGCATCGATGCGACAAAGCTGACAGTTGGAAGCATGCAGACAGAGTGTTGCACATGGAGCGAGGACAGGAAACTCCTGCCCGAACTGCTGAAATGGAAAGGTCTCTCTGGACGGGAGTTAACGGAGGTGCTGAAGGTCCTGGAGGACCTCCCTAGATAAGTTATGAAGTTATGAACTATGGATCTATGAGACTGAACGATGACCACCACGGTCTTACCTTGAATGATGCAATCCTTCAACCCATGGGGACGTGCACAGAGACATTTGGAAGGGCTATTGCTCTAATCTAGAAAAAAggcaccccccccctccccccactccattcAACCTTCAAAGATGGAGATGTCTACAAAGGAAACATTATAATTCTGAATAAGTTCTACagttaggcctgtcacgataaaaAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039786911.1 True 2045 mRNA 0.48 11 6772127 6792523

Neighbor

gene id symbol gene type direction distance location
ckba ckb,LOC107698148 coding upstream 113526 6650792 ~ 6658601 (+)
bag5 bag5 coding upstream 184304 6570186 ~ 6587823 (+)
LOC120548986 btbd6,LOC104965074,LOC101483787 coding upstream 346083 6421737 ~ 6426044 (+)
LOC120548886 syne2,LOC104943765 coding upstream 1201580 5376998 ~ 5570547 (+)
LOC120549592 LOC104922054 coding upstream 1500339 5271159 ~ 5271788 (+)
LOC120550058 NA coding downstream 29590 6822113 ~ 6822319 (+)
LOC120550062 NA coding downstream 30732 6823255 ~ 6823461 (+)
LOC120550056 NA coding downstream 36250 6828773 ~ 6828979 (+)
LOC120550064 NA coding downstream 41495 6834018 ~ 6834225 (+)
LOC120550063 NA coding downstream 45278 6837801 ~ 6838007 (+)
G200498 mark3 non-coding upstream 46404 6715936 ~ 6725723 (+)
G200484 NA non-coding upstream 137623 6632485 ~ 6634504 (+)
G200455 NA non-coding upstream 173735 6597774 ~ 6598392 (+)
G200450 NA non-coding upstream 176309 6592416 ~ 6595818 (+)
G200475 NA non-coding upstream 232553 6528157 ~ 6539574 (+)
G200501 NA non-coding downstream 9616 6802139 ~ 6803061 (+)
G200569 NA non-coding downstream 68111 6860634 ~ 6861052 (+)
G200571 NA non-coding downstream 71802 6864325 ~ 6864824 (+)
G200602 NA non-coding downstream 180582 6973105 ~ 6987231 (+)
LOC120549536 NA non-coding downstream 195482 6988005 ~ 7017657 (+)
LOC120549783 NA other upstream 3465 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 24725 6732248 ~ 6747402 (+)
G200492 NA other upstream 89536 6677658 ~ 6682591 (+)
G200452 NA other upstream 200370 6568276 ~ 6571757 (+)
LOC120549412 NA other upstream 1054019 5715217 ~ 5718108 (+)
LOC120550068 NA other downstream 107616 6900139 ~ 6900344 (+)
G201057 dcaf10,LOC102795877 other downstream 2428118 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 2798647 9591170 ~ 9604625 (+)
G201287 NA other downstream 2916341 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 3143213 9935736 ~ 10007687 (+)

Expression


Co-expression Network