G229945


Basic Information

Item Value
gene id G229945
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23947693 ~ 23948538 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU311919
tccacataacactaataggaacacataggacacaccagtgcataggcctatttatttgtttaatttaaactgacttaaacttatatgctaataatagtagggatcacgttccactcttttgaataagtaaggggtgtttgagctaaaccataaacaatcaaattaaagctcaattagttttatttttcaacattattgcaatagttgtagcattatgaggttttcttgtccggagattgttttaatacaaagtggttatattgttgtggtttttatttctagctagtattttggagccctgcaggtagcctctgtgctgggggtgttgagcaataacaggaagaacgcatcgtctcaaactttcagcgttttctgtgcttgtgaacttggGAGTTAATTCccaaccagcaagaacgttctccccaagaacacaagtccgtactttgcattcttggtattgagaaaTGCCCATGCTCTAATACGATCCACAGAAGTGGCGGCAGGAAATACAACCTAAtgtctaaaccagagaacgtaacgGCCGCTGTTTTGAACGTTAAGGTCGCAATTTTATAcacgttaacgttgtgaaacagtcgcagtttggttatgtttaggcaccaaaactactttgataagtttagaaaaacatcgtggtttgggttaaaatcccACGTTACTTTACTTCCGGTTAGGCACGTGATGCTGAACGGGACTTCCGCtgtgtacttttattttcaaacgggaATCGAaccccgctctcctgggtgaaagtcctgtgtgtgtttgtctcgtTTAAGGTGCTACAAAACAACTGAAGAACCAACCCACAAAATGTGTCATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311919 True 846 lncRNA 0.40 1 23947693 23948538

Neighbor

gene id symbol gene type direction distance location
asb13a.1 LOC103363234,LOC100709988,LOC105929846,LOC101482319,LOC102215476,LOC108241840 coding upstream 13817 23924156 ~ 23933876 (+)
gdi2 gdi2,LOC104923747 coding upstream 33880 23899241 ~ 23913813 (+)
ankrd16 ankrd16,LOC102787719 coding upstream 49795 23886747 ~ 23897898 (+)
trnay-gua_62 NA coding upstream 60269 23887337 ~ 23887424 (+)
ppp6r2a LOC104923754 coding upstream 240725 23686003 ~ 23706968 (+)
mkln1 mkln1 coding downstream 261081 24209619 ~ 24249507 (+)
ift46 LOC107372934 coding downstream 353227 24301765 ~ 24308444 (+)
LOC120553464 LOC107381693,LOC105020203 coding downstream 371738 24320276 ~ 24365349 (+)
chst11 chst11 coding downstream 436360 24384898 ~ 24478763 (+)
nopchap1 LOC104942935 coding downstream 617703 24566241 ~ 24571321 (+)
G229938 NA non-coding upstream 31305 23915811 ~ 23916388 (+)
G229841 cbll1 non-coding upstream 268385 23667703 ~ 23679308 (+)
G229821 dnajc2 non-coding upstream 362194 23579721 ~ 23585499 (+)
LOC120552982 NA non-coding upstream 689832 23232498 ~ 23257861 (+)
G229676 NA non-coding upstream 739493 23207076 ~ 23208200 (+)
LOC120553072 NA non-coding downstream 21409 23969947 ~ 23971613 (+)
G229974 NA non-coding downstream 46028 23994566 ~ 23994835 (+)
G229976 net1 non-coding downstream 116676 24065214 ~ 24066989 (+)
LOC120553514 NA non-coding downstream 139487 24088025 ~ 24095165 (+)
G229994 NA non-coding downstream 164427 24112965 ~ 24116121 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 2053 23934300 ~ 23945640 (+)
adm2a NA other upstream 99069 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 507030 23315421 ~ 23440663 (+)
phlda1 phlda1 other upstream 1204514 22739717 ~ 22743179 (+)
G229428 NA other upstream 2079396 21867201 ~ 21868297 (+)
LOC120553083 NA other downstream 361004 24309542 ~ 24314707 (+)
G230148 LOC102781993,LOC101465723 other downstream 672274 24620812 ~ 24778258 (+)
LOC120553523 NA other downstream 1414344 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 1693302 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 1861869 25810407 ~ 25812828 (+)

Expression


Co-expression Network