G37524 (evc2)


Basic Information

Item Value
gene id G37524
gene name evc2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 11349550 ~ 11349773 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU50346
CAGTGGTTCTGTATACTCTGGGCCACGTCTTGTCTCTCCaggctctttctctctctgagcTGCAGAATGAGCAGGCTGTGCAGAGTGAGCATTGCTCCGCAGGTCTGCAAGACTTTGGTCCTCCTCTCAGCCTTCTGGTAGTGGATGGTAGCCATCTGCATCGCCAGGCTGTCGCCCTGAGAGCGCAGACCGTCCTCTCTCTCCCTACGCATCTCCTCCATCAC

Function

symbol description
evc2 Predicted to be involved in smoothened signaling pathway. Located in nucleus. Implicated in Ellis-Van Creveld syndrome and Weyers acrofacial dysostosis.

NR:

description
PREDICTED: limbin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50346 True 224 lncRNA 0.57 1 11349550 11349773

Neighbor

gene id symbol gene type direction distance location
msx1a msx1 coding upstream 16904 11330556 ~ 11332646 (+)
LOC120558115 NA coding upstream 83480 11263510 ~ 11266070 (+)
LOC120558172 LOC104927939,LOC104961953,LOC100699369,LOC102798792,LOC103359250 coding upstream 106185 11236707 ~ 11243365 (+)
aggf1 aggf1 coding upstream 122968 11219389 ~ 11226582 (+)
r3hcc1 LOC104945372 coding upstream 181744 11156708 ~ 11167806 (+)
LOC120557333 evc coding downstream 11633 11361406 ~ 11375812 (+)
LOC120557335 LOC103359258,LOC101476783 coding downstream 26762 11376535 ~ 11382180 (+)
myl9b LOC100697131,LOC101062217,LOC105901900,LOC103386121,LOC106565219 coding downstream 543817 11893590 ~ 11905754 (+)
LOC120557971 kiaa1755 coding downstream 731332 12081105 ~ 12111841 (+)
tgm2b tgm2,LOC103354993 coding downstream 764235 12114008 ~ 12127710 (+)
G37523 NA non-coding upstream 182 11349136 ~ 11349368 (+)
G37522 NA non-coding upstream 1879 11347086 ~ 11347671 (+)
G37521 NA non-coding upstream 4491 11344740 ~ 11345059 (+)
G37383 fam219a non-coding upstream 405924 10936683 ~ 10943626 (+)
LOC120557560 NA non-coding upstream 420163 10928477 ~ 10929387 (+)
G37526 NA non-coding downstream 4503 11354276 ~ 11354743 (+)
G37527 evc2 non-coding downstream 5856 11355629 ~ 11356360 (+)
G37528 NA non-coding downstream 10000 11359773 ~ 11360248 (+)
G37553 NA non-coding downstream 58203 11407976 ~ 11416351 (+)
G37560 NA non-coding downstream 71750 11421523 ~ 11421722 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other upstream 336641 10997230 ~ 11012909 (+)
glrx glrx other upstream 953363 10387908 ~ 10396187 (+)
G37197 NA other upstream 1039554 10305187 ~ 10309996 (+)
prickle2b prickle2 other upstream 1492894 9760233 ~ 9856656 (+)
G36744 NA other upstream 3120830 8227762 ~ 8228720 (+)
G37525 evc2 other downstream 2305 11352078 ~ 11352387 (+)
LOC120557336 LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 other downstream 35411 11385184 ~ 11394398 (+)
G37597 NA other downstream 430405 11780178 ~ 11805394 (+)
G37714 NA other downstream 903293 12253066 ~ 12254974 (+)
LOC120557851 krt18,LOC105931717,LOC101469154 other downstream 924987 12274760 ~ 12278624 (+)

Expression


Co-expression Network