LOC120557086 (grip2,LOC106537019,LOC106530820,LOC103464302,LOC103143242,LOC103386517,LOC107691200)


Basic Information

Item Value
gene id LOC120557086
gene name grip2,LOC106537019,LOC106530820,LOC103464302,LOC103143242,LOC103386517,LOC107691200
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 31020772 ~ 31374048 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797121.1
gagagagcattggTGCCGCAGCGGGACCGACTGTCACACGGACTGTCAGCGGGGTTGTTACCGGAGAGAGCAGCCGCTACTTGCCGTGTATCGATAGCCACACcgggagaggacagaggagcaaCCACAAAGACGAAGAAGAagagcagaagagaagaagaagaagtagaagaagaaaaaaacagggggAATCGTTATATCTGCTGCTGTCGCCTGCGTGTCATCACCTAGACCGGACAGGATCTATCACCATCACcactcctcttcatcatcatcaccaccctCACCCTCACCCTCTAGAcctgtcctcctctccctcttctccctcATGAACATGCCGGGCTGGCGGAGGAACCTCACTTTCTGTCTGCAGCGGATGCACGAGGAAGATGACGGACCATATGGAAAAACTAAGGATATCTCTGGACCAGAACAGACCATGGCCTCGAGAAGACACAGTATACCAGCTCTGCGGGGGGTGACCATGGTGGAGCTGGTGAAGAAAGAAGGCAGCACACTGGGCCTCACCATCTCAGGAGGAACCGACAAGGATGGGAAGCCGCGGGTATCGAACCTACGGCCTGGAGGACTGGCGGCCAGGTGGGTGCAACACCAGTAA

Function

symbol description
grip2 Predicted to enable protein C-terminus binding activity. Predicted to be involved in several processes, including neurotransmitter receptor transport, endosome to postsynaptic membrane; positive regulation of AMPA glutamate receptor clustering; and positive regulation of excitatory postsynaptic potential. Predicted to act upstream of or within Notch signaling pathway; artery smooth muscle contraction; and positive regulation of blood pressure. Predicted to be located in cytoplasm; dendritic shaft; and neuron spine. Predicted to be active in glutamatergic synapse and postsynaptic density.

NR:

description
PREDICTED: glutamate receptor-interacting protein 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797121.1 True 619 mRNA 0.56 3 31020772 31374048

Neighbor

gene id symbol gene type direction distance location
LOC120557908 NA coding downstream 216203 30803381 ~ 30804569 (-)
rims4 rims4 coding downstream 412720 30525968 ~ 30608052 (-)
ywhaba ywhab,LOC101154846,LOC103464293,LOC106947331,LOC102237816,LOC103143238,LOC107100836 coding downstream 546554 30446758 ~ 30474218 (-)
LOC120556903 NA coding downstream 687021 30332033 ~ 30333751 (-)
lmcd1 lmcd1 coding downstream 936901 30064169 ~ 30083871 (-)
LOC120558256 NA coding upstream 12553 31386601 ~ 31386657 (-)
LOC120558257 NA coding upstream 18528 31392576 ~ 31392632 (-)
LOC120558242 NA coding upstream 22214 31396262 ~ 31396318 (-)
LOC120558244 NA coding upstream 24148 31398196 ~ 31398252 (-)
LOC120558255 NA coding upstream 26028 31400076 ~ 31400132 (-)
G42914 NA non-coding downstream 109293 30911029 ~ 30911479 (-)
G42904 NA non-coding downstream 125516 30894713 ~ 30895256 (-)
LOC120558094 NA non-coding downstream 128126 30876295 ~ 30892646 (-)
G42895 NA non-coding downstream 146451 30873579 ~ 30874321 (-)
G42893 NA non-coding downstream 147312 30866554 ~ 30873460 (-)
G42973 NA non-coding upstream 96597 31470645 ~ 31470849 (-)
G42976 NA non-coding upstream 182739 31556787 ~ 31556994 (-)
G43018 NA non-coding upstream 324731 31698779 ~ 31761433 (-)
LOC120556863 NA non-coding upstream 368094 31742142 ~ 31745424 (-)
G43017 NA non-coding upstream 435473 31809521 ~ 31968155 (-)
LOC120557755 grip2,LOC103357845,LOC102782189 other downstream 5125 30946332 ~ 31015647 (-)
LOC120558045 NA other downstream 341690 30638971 ~ 30679082 (-)
romo1 romo1,LOC102788570 other downstream 890455 30125751 ~ 30130317 (-)
LOC120556842 rpp14,LOC102775666,LOC101465350,LOC103374991 other downstream 983451 30036382 ~ 30037321 (-)
LOC120557442 hes5,LOC104956007 other downstream 2270539 28741798 ~ 28750233 (-)
LOC120557401 blcap other upstream 1313972 32688020 ~ 32747110 (-)
podxl2 podxl2,LOC102777608 other upstream 1376744 32750792 ~ 32783836 (-)
LOC120557803 NA other upstream 1814020 33188068 ~ 33223258 (-)
LOC120557840 svbp other upstream 2152449 33526497 ~ 33530867 (-)
LOC120557811 fam120a other upstream 2537332 33911380 ~ 33953932 (-)

Expression


Co-expression Network