G63752 (LOC104949726,LOC105907579,LOC107729055,LOC101080081,LOC106580180,LOC100701005)


Basic Information

Item Value
gene id G63752
gene name LOC104949726,LOC105907579,LOC107729055,LOC101080081,LOC106580180,LOC100701005
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 21905596 ~ 21908318 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU85440
TGACATTTTAACAGAAAGTTTATTCAGTCATCCCAATAACTTAAAAAGTTCCCAGAATGCATCAGAGATAAATTTGTGTCCAAAAATGACCTGGCAGAACATAAACCTAAAACTTAAATGGCAACTTTGCACCACCTACCAAAACTAACAATGAACATATGGTGAGAGGGGAAAAGCATACCAATGGAAGCAAAGCCAAACCAGaactaaaaaaatgaataaaataacttCAAGTCTCTAGAATCAGTTCTGACGGTTAAACAAGACCAAACTATAAATAGTTTTTGGTTTCTTTCAGTGGGTAAGGTGTAAAAGTCTGTCTTATGAATATAAAAGTTATATTTATCTCACATTACAACAGTGATGTCTTCTAGCTTCGCCAGAGGTGTTCTGTTCAGAGTCACATTCAGTTCTACAGGTGAACTTCAAAATGACCACAGTATACTCAGGTATTCCATGTTTCAGCATTCATTCCTGTGTCTAAGAGCTGAATTTAGTGTGAATAGTGAGGGAAAGAATGACCCAATGACTGATTCCTGGCTGAAGCGACACTACCAGGTTGAACTAAGCAGGCTCATATGTTCAGAACCAGTCATATTATATATAGACATATTCGATTTAAGCTGTCTAAATCTTCCTCCCTGTTCCTTTAGAAAATTAATTGAGTAGGCAGTCAGGGAGtacaatttcaaattacaaCTACAACTCAAAGTTACTGGAATTACCTTATATTCCAGCAATATTTTGCAAAACAACATTCATTTTTACAACAGTGCTGTATAAAACCAAGAGCAATATCAGCCTACAAGATAAATAAGTGTTTACACTTTAAACAGCAAGCACTAGATGTAACATTGCAAGGGAACAACTGAAAaacaaagtttgtttttgtttttttacattggtGCACTAAAAACAGCTGGCATTGCCACTTAACACTCAAATGTGCCATTTccaaaagaatattttttttgcctTCGACATTAAGTCACATAGATAATTATAAAATTTTTAGGAAATAATTCACCTAGGTGTGGTCAAACTGAAGCATGACTTTACGCCGATGTGCAAATGGAATACAAATagcaaaaactattttttttttaaggaattgGGTCTGCAGTCACTTAGGGGAGACCATCTGTAGCTCTAAACTCAATCTTTCAACCCAAATAAAAACAGTTTCAAGCTAATATTAAATTAAAGGATGACTTACTCTGAATACAGCATACTCTTATAACTCCTCTAAAATGACAAAGCTGATAAAAGCACAACACAACAGGTGCACAGAtaactcagttggtagagtgggcacccatacatagaggtttactccttggcGCAgagggcccgggttcgactctgaccctTTGCTGAATGTCATtctacccctctctctctctcccctttcatgtcttcagctgtcatgtcaaaataaaggctgaaaatgcccacaaaataatcttaaaaaaaaaaacacaacacaaaatctACTCTCACTTAATACAGCGAGatttaataaagaaaaaaaaaaagaaatttttttCATGACCAAATGCAACGTTTGTGGGGGAACCACTCTTTGCCTTGCCAGTGTGGTTTTGGAGACCCAATGCTTTGCATGCAAGGAAATAAACAAAACCATAAACCTTACATTATATACATTTAGTCACAAATTCCACTCTCTGTTATTTCAGTGCACATTTTGGGCTGAAAAATGAAACAGATCAAGAAGAGAGGTTTTGAGATgacggggggaaaaaaagaacaaataaaatcAGAACACATTTAGAAATTATTTCGAATatttaaagtagggctgggcaatttaTCAATATTGTGATAAAAGATATcttcttaaattttggatatcgtaatatggtaagtgttgtcttttcctggttctaCAGGCTGCATTACATTAATGCgatattttctgaacttaccttACTTCTAGctattctattatttgcctttaaccacttaaGTCATATCTATGGTACGTCTGattatttgtcaaaaaaatctcattctgtaaatagtttgtaaaagcaccaataggcaaccctacaatatcgttgttATATCGATAAAggtatttggtccaaaatattgtgatatttgatattcTCCACATTGCCGAGCTCTACTTCAAACTATAGGACCTTGAACTGCCTCCAATACAGATGGTACAAGCGACACAAACAAGAAAACCTTCCTTCAGGTTTTTCATTTTACCCCTCACAACCATTTTAAACGTATTTAACCTTTTAGACTTCAAGACTCATTTGCATAATGTTTGTAAGAATACCAGTGCAGAATGAAGACGACATGTCAGATTGTGCAACCTGGCAGTTTGATATGATCCAATTTTAGATCAGCACTGATATTCTAACCCACTCTATGCACACCAGTCCAGGTACGGATAAAGAAAGTGATGAATTAGATTCCGGGGCTCAGAGACTGTTACGATCCAACGCGTGTTGTAGTGGTCTTTCTGTCAGAAAAGAAGCTTCTCAGCAGGACCACCTGGCTGATGCTGACCACCAGAAGAATAATGGCCTCTCCGATGGACCAGAATGCAACACGGGTGTTGAGGTCCTCCGCCCGACTGCGTCCCTGGGCCTCACGGAGGCGGAAGTGAGTCTGGTAGTCGATGACCGACTTCAGGGCCTCGTGGATGGACACGCAAGCTGATTCCAT

Function

NR:

description
PREDICTED: transmembrane emp24 domain-containing protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85440 True 2703 lncRNA 0.37 2 21905596 21908318

Neighbor

gene id symbol gene type direction distance location
LOC120561290 LOC103360521,LOC103470199,LOC103135399 coding downstream 4159 21895617 ~ 21901437 (-)
LOC120560589 LOC103360519,LOC101485884 coding downstream 63202 21813936 ~ 21842394 (-)
naa35 naa35 coding downstream 477346 21418227 ~ 21428250 (-)
LOC120561229 slc1a3,LOC103362937 coding downstream 526021 21347645 ~ 21379575 (-)
nipbla nipbl,LOC103362938 coding downstream 561659 21312380 ~ 21343937 (-)
prf1.5 LOC104957351,LOC100696983,LOC108244797,LOC103355507 coding upstream 903866 22812184 ~ 22815579 (-)
mpeg1.1 LOC102785973 coding upstream 908085 22816403 ~ 22819921 (-)
LOC120559996 LOC100701823 coding upstream 914998 22823316 ~ 22824200 (-)
mier3b mier3 coding upstream 998137 22906455 ~ 22920318 (-)
plk2b plk2 coding upstream 1065946 22974264 ~ 22979273 (-)
G63736 NA non-coding downstream 10099 21892510 ~ 21895497 (-)
G63744 NA non-coding downstream 29888 21875488 ~ 21875708 (-)
G63741 NA non-coding downstream 57083 21848296 ~ 21848513 (-)
G63703 NA non-coding downstream 92177 21813176 ~ 21813419 (-)
G63696 NA non-coding downstream 121671 21782509 ~ 21783925 (-)
G63759 fem1c,LOC102782917 non-coding upstream 8350 21916668 ~ 21919368 (-)
G63770 NA non-coding upstream 77997 21986315 ~ 21989970 (-)
G63820 NA non-coding upstream 423157 22331475 ~ 22331888 (-)
G63827 NA non-coding upstream 691205 22599523 ~ 22600417 (-)
G63884 NA non-coding upstream 925161 22833479 ~ 22835092 (-)
LOC120560435 idnk other downstream 214046 21681976 ~ 21691550 (-)
rmi1 rmi1 other downstream 278575 21616223 ~ 21627021 (-)
ntrk2a ntrk2 other downstream 321320 21479786 ~ 21584276 (-)
G63487 NA other downstream 1213317 20691878 ~ 20692279 (-)
LOC120560417 LOC104920278,LOC103361005,LOC106523804,LOC103398708,LOC101066291,LOC101475922 other downstream 1427791 20451594 ~ 20477805 (-)
G63882 LOC104956296,LOC101068944 other upstream 921877 22830195 ~ 22833089 (-)
smim15 smim15,LOC106580593,LOC103398561 other upstream 1366601 23274919 ~ 23281128 (-)
foxd5 LOC103358907,LOC104942959 other upstream 1476400 23384718 ~ 23387305 (-)
lzts3b lzts3,LOC102793849 other upstream 2968277 24876595 ~ 24937440 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other upstream 3093005 25001323 ~ 25016921 (-)

Expression


Co-expression Network