G63736


Basic Information

Item Value
gene id G63736
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 21892510 ~ 21895497 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU85406
ttttaaaaaagaaaaagaggataaAGAATTCGCTGCTACAGTTGTTTTTAAGTGCTGAAATACGGCCCAGCCCCTTTGCCTCTCAGTTTTGGGCTCATGGCGAACTGTaaggacagaaagaaaaggTGAGCATGTTTACATATAGTGACTTCCACATAAGAGTGTTTAAACTAATAGTATTCTCCTGGTTACCACATAATTTAATGCCTACTGCAGTAAACTGGATATAAGTGCTGTATTATCCTGGCAAATGGCACTCTATTCCagattgtgtaaaaaaaatgatCAGGCTAGCAAAGTGTGTGCCTGtgctacttttaaacatcatATGATGTTTAGATGCTCCAGGTCATACACGAGAGTTATTGAGTATTGCTGATATTAACAGCATATTAATATGCATGCAAACAAACCCACAAATGGTTTTTAAACCAAGTGGGTCAAACCTGCAACTGCAAAGTTGTCACACTCCGAAGGCAACCTCTTGTTGCCTCAGGATTCTTTCTTTTCCAGACTAGAACCAACAAGTGGGTAGTTCCTTTTTGTAAAGTACCAGGATTTTACACCACTTCAGTATCGCCACGTTGCTTTCCACTTTTACTTAAAACTGTTTACTGTAAACTCGTGCCTAATTCCGTTCTGagtaaacaaaaagaaaccaCTGATTCAGCAGACGCACAGTGTTTCTCTGTCTTAAAACAAACTGGTGGCCTTTTTGTAAAAGCCTGTAATTAACTTACCAATGCTATCTACAAATCTAGATCTTGGCCCGAAAGAACACAAGCTGACAGACCGAGGTCTTGAAGTATTCGTCGAAGTTCAATCTCTTAAATATATCTGGAATATCTGTGATATAACAAAGGTTATATCACAGGGATGTTTTCTTTTGCTTCCTATTTTTGTTGAGCCTTTCTAGTATTTACCACCTATTGCTTTATCTTTTCAGCACCAAACACTCCCATTTACTTTATTTCTGTTtccatattttttttccctctcattgtttttttttttttttaataccgtttttgtatatttttcgaTTACGTCCTTGTTTGGGGAAGCCATGTGCTGGTTTTCAGAAGGATATGCACAGCTTGTCCCTTTTTAGAAACATTCCTCCTCCCCTGTATTGCAATCACTTTTGTAGATGGTATAAGTATGGCTAGTTAGTAGTAACGCCTCACCTGGGAGTCAAAAGAGCTGATATTCTATCAAACTCTGCTACCAAAACAGGTGTAATCTGGAAAAAATCCCTTACAGACTTCTCAACCATCTCAatggtgtcattttctttcaTGTGAACAGCTCCATCCTGTGGCCGTCTCGTCACAGCCATTTTGTGTTCTTGTTGATAAGCAGTCAGCAAAATAATGCCATTAGGATGCAAAATTGAGACGGCGGCCACCACGCGgcctatgcaaaaaaaaataaactcagTATGTTAACTACTCAACGAAGCACTAGATAAACTAAACTCGGGTTTCAATTAGAGCTCAAACTACCTTGGGTGTTAATTTGTTAACAGACCTGCGTAACCATATCCCTTCTCTTTTTACTACTACATTTCAGTCGGGGTTAACCTTCATCACCTGCTCTAATGCATTGATGAGATGTTTCAATAGCACACGCTTTGCTTCTCCTGTCTCATCAGCACATTTGCTGTTCTGTGCCCTACTAAGCACAGCCTTCCCCATATCTTATCGCACTATTGACAAGTTTGGACTCCAAAAACTGACTTttgtcccccccaccccctcccctccaTTCAATGTGTGCATCTGTCCGTTCCTCCGCCTGAAAAGTGAAGAAAATGTATCGGTGGAAATCATCTCAAATCTTAGCTTTAAACACCAGTGTCTCTAGTCTTTGTTTTACAGGATTGAATGAATTGACGGACATTTCGAAGGGGAAGCAGCTGGAAAGATTCTTACATCTTGGACTCTGCCAACACTACATAAGGTCAATACTGTTGCTTTACTTTGTGGACATTGGATCACAGTCCGTCTAGCATTCCAGCTGTGAACAGTATTTCGGAGTTATTCTATTGCTTGGCTCTGTTTCTTAAATATCTTCTTCTTTCGTGGATGATTGAGCTTTCCCGAGGAAATGGAACCAAATGAGTCccaaaagtgcaaaaaaaacccATCTGCTTCTGCCCCCTCGGGTCTTCTCTCCgtcctttttgttttacttactCTCTTTGCTCTCTCTGAGGGAATGCAATACACTGTCAGCCCTCAGTTTATTGACATGAATCTATTGACATTTTTTGTATGTATTATATAATGTTACTGTTAATGATAAATATACAgaacttatttttattttgttacatttcatatatatacataaatatatctatattaaaatgtttacaataatttttttttttttttacttagatTGATTATGTAAATGAAGAGTTGGAAACCCAGAAATGTTGCAGGAGGGTGTCGATGCTATCTGCTTGTAGTCTAGTTATTAGTTTTACAGTATTGACGATAATAGTATTGATAGCTGCCGTTTAACTTAGTGGAAAATGGAATGTGCATCACGAGCATGTCTTCATAATGTACCGCCAATGTAAAGCGTCACACTGCAACTGTAAAAAGGCCAAGGATTCAAGCTGCCGGTCATGTCTGTACGCCACCAAATTAAAAACTGtattatgtaaaaaataatatatatatatatatatataattgagcATATATATAATGTTAAGCTGTACCAACAGTTCAAAGTATTTGCTAATTTTACTACACTTTTGTTATGTATATGTAGGGGGAGTCTTATGGCATATAAATTCTTCAAATTGAGTCAGGAGTTTAGAAGCAGACTATATTTTATAACGGCCTTTTAAGTTATTGTGGCCAAAGCACTGATATTATATATTTGCTGTAAAGAGAATTTAagagttttatttttctgatattaaagTTACTTAATAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85406 True 2957 lncRNA 0.37 2 21892510 21895497

Neighbor

gene id symbol gene type direction distance location
LOC120560589 LOC103360519,LOC101485884 coding downstream 50116 21813936 ~ 21842394 (-)
naa35 naa35 coding downstream 464260 21418227 ~ 21428250 (-)
LOC120561229 slc1a3,LOC103362937 coding downstream 512935 21347645 ~ 21379575 (-)
nipbla nipbl,LOC103362938 coding downstream 548573 21312380 ~ 21343937 (-)
ndc80 ndc80 coding downstream 580875 21299204 ~ 21311635 (-)
LOC120561290 LOC103360521,LOC103470199,LOC103135399 coding upstream 120 21895617 ~ 21901437 (-)
prf1.5 LOC104957351,LOC100696983,LOC108244797,LOC103355507 coding upstream 916687 22812184 ~ 22815579 (-)
mpeg1.1 LOC102785973 coding upstream 920906 22816403 ~ 22819921 (-)
LOC120559996 LOC100701823 coding upstream 927819 22823316 ~ 22824200 (-)
mier3b mier3 coding upstream 1010958 22906455 ~ 22920318 (-)
G63744 NA non-coding downstream 16802 21875488 ~ 21875708 (-)
G63741 NA non-coding downstream 43997 21848296 ~ 21848513 (-)
G63703 NA non-coding downstream 79091 21813176 ~ 21813419 (-)
G63696 NA non-coding downstream 108585 21782509 ~ 21783925 (-)
LOC120560434 NA non-coding downstream 216589 21674632 ~ 21675921 (-)
G63752 LOC104949726,LOC105907579,LOC107729055,LOC101080081,LOC106580180,LOC100701005 non-coding upstream 10099 21905596 ~ 21908318 (-)
G63759 fem1c,LOC102782917 non-coding upstream 21171 21916668 ~ 21919368 (-)
G63770 NA non-coding upstream 90818 21986315 ~ 21989970 (-)
G63820 NA non-coding upstream 435978 22331475 ~ 22331888 (-)
G63827 NA non-coding upstream 704026 22599523 ~ 22600417 (-)
LOC120560435 idnk other downstream 200960 21681976 ~ 21691550 (-)
rmi1 rmi1 other downstream 265489 21616223 ~ 21627021 (-)
ntrk2a ntrk2 other downstream 308234 21479786 ~ 21584276 (-)
G63487 NA other downstream 1200231 20691878 ~ 20692279 (-)
LOC120560417 LOC104920278,LOC103361005,LOC106523804,LOC103398708,LOC101066291,LOC101475922 other downstream 1414705 20451594 ~ 20477805 (-)
G63882 LOC104956296,LOC101068944 other upstream 934698 22830195 ~ 22833089 (-)
smim15 smim15,LOC106580593,LOC103398561 other upstream 1379422 23274919 ~ 23281128 (-)
foxd5 LOC103358907,LOC104942959 other upstream 1489221 23384718 ~ 23387305 (-)
lzts3b lzts3,LOC102793849 other upstream 2981098 24876595 ~ 24937440 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other upstream 3105826 25001323 ~ 25016921 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_029839 NA non-coding NC_007116.7 CM002889.2 6933062 ~ 6939709 (+)
bowfin (Amia calva) G77755 NA non-coding CM030129.1 CM030129.1 12462963 ~ 12513921 (-)