G77755


Basic Information

Item Value
gene id G77755
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 12462963 ~ 12513921 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU97031
taaatatatatatatatatatatatatatatatttttttaaaccattgtgAATGTGGTTGTGTGGGAAAGGGTGGCGTTTACTCTTGATAAGGTGTGTGCAAAAGGCTagagagcaaaaacaaagcagtcttttatttatgtatctataaatgtatatcttatattatttttaaaccagatctttatgcaaataaaatctAGCCTTGGTCCACACCTGAACAACAGTTTCACAAACCCTAATTGGCCCTAATCTTAGCCTTCCTAATTTACTTAATGACCTGGTCCTAAAGAACCGTTAGTATTGTGATAGTGTGAAACACCGAAGGGCTAATCTTGCTAGACCACTTTCTTTGAAGCCTTTTTCGACTCGTTTCTTTACTCTCATTCAGCCCTTCTTTTTGGGTTAAATGCCTGATCTTAAATGTGGGTGAGCTGATGTCCTTGCTCTCTCCACCCTTGTAATCCCAGAAACACTCTCCTCTGCCCCTTTCCAGTTTTTGTAATGGTTTGTCCTGCAGTGCCACAAGATTTCTGAGAAGGAATGGTGGGACTGTCCCAAAAGTATTTAttagttcttgtttttctggCTGTACTGTGCACAGACTGATTCTGGTTCCTGATTTGGGGCCCACCACAAATGCTAGTATCTGCTTTCAGAGAATGTGACCTATTGATGGCTCATCTTTTAGGagaaagaagctgtgaaaatataCCACCCAATCTCTAAACCTTCACTGGGTTTGAGTTTCACTTAACTGAGattaacatttttcagtttgaatcTGTTATTCCCTGGCTTGTGCTGTAAAGGGGGTGCATTGGAATTCCTTTTCAAAGAGCTCTGGGCACTAaagaggttttctttttaaattcatccagacatgcatatttgtatttattttttataacttttaacCATGTCAACGACTGCTGCTTCTGTTTGTGCACAATACAGAGTAAGAAAAATGAACTTTCCTTTTAAGTGTTCATATGGATGTCTGTGTTGCCTAAAGAATATCTGGGATTATTTAACTATCATTAGGAAAGCAAGCTAGTGGACTTGACTGCTCAAGGGTTCAATAACGCAGCAGTTTTTCTACCAGTGGCTTGTCATTTGGCCATTGAGGTTAACATGAACTtctaatgtgtattattattattaaactggtaaatatatagattttattttttatttccacttgAAGTTACATTtcgtatatataaatatatattaaaagtttacaaatcagtttttattttttccagtatgAGATTTGCCTTGATGGCATATGATGTAATGCATAAACTTTAAAGCTAACCGCTTGTAGTCTAGTTTGTCAGTATTGAAATCTAAGACTTAGCTGCCGTCTCGTAGGTAAGAACGAATGTTCACGAAGCATgtcttttgtattgtattgcattgtacacTGCAACTAAAAAGCCAAGGAAATAACACATTAGGTGCGTGTACTATTTCGGTAAACCACGAACTTAAGAATGACATACTGTACCCATAGTTTAGTATTTCCTAATTTTACTACACTTTTGTTATGTATATGTAGGGCAGTCATAGGGAGTATAAATTCAATATTAagtaaagtttaaaaaacaaacaaaaaactatggGGAGGGTGGGgacaataaacaaaaccatatatattttatgataaagGGCCTTTAACTTATGTGGCCAAAGCactgatattatatatttgctGTAAAGAGAATTAtaagagttttatttttctgatattaaaagttACTTAATAAAgactgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97031 True 1779 lncRNA 0.35 2 12462963 12513921

Neighbor

gene id symbol gene type direction distance location
AMCG00010069 NA coding downstream 117619 12339260 ~ 12345344 (-)
AMCG00010070 LOC103390388 coding downstream 182072 12208986 ~ 12280891 (-)
AMCG00010066 NA coding downstream 254971 12161014 ~ 12207992 (-)
AMCG00010065 NA coding downstream 331774 12124048 ~ 12131189 (-)
AMCG00010064 NA coding downstream 358159 12097568 ~ 12104804 (-)
AMCG00010088 NA coding upstream 1064795 13578716 ~ 13635400 (-)
AMCG00010091 LOC108435138,LOC105014579,LOC106585820 coding upstream 1129167 13643088 ~ 13675666 (-)
AMCG00010090 LOC105901120,LOC105014579,LOC107558977 coding upstream 1189476 13703397 ~ 13712371 (-)
AMCG00010092 NA coding upstream 1746818 14260739 ~ 14279927 (-)
AMCG00010097 zbtb7c,LOC106568492,LOC106561213 coding upstream 2025982 14539903 ~ 14546114 (-)
G77738 NA non-coding downstream 4844 12432913 ~ 12458119 (-)
G77713 NA non-coding downstream 103396 12358327 ~ 12359567 (-)
G77672 NA non-coding downstream 273454 12189310 ~ 12189509 (-)
G77660 NA non-coding downstream 316150 12145069 ~ 12146813 (-)
G77658 NA non-coding downstream 318249 12143999 ~ 12144714 (-)
G77758 NA non-coding upstream 29514 12543435 ~ 12543640 (-)
G77760 NA non-coding upstream 204962 12718883 ~ 12721609 (-)
G77852 NA non-coding upstream 1657390 14171311 ~ 14171582 (-)
G77878 NA non-coding upstream 1893697 14407618 ~ 14407820 (-)
G77887 NA non-coding upstream 1927695 14441616 ~ 14446141 (-)
G77544 NA other downstream 733798 11728503 ~ 11729165 (-)
AMCG00009989 NA other downstream 4141619 8314109 ~ 8321344 (-)
AMCG00009987 NA other downstream 4255636 8195735 ~ 8207327 (-)
AMCG00009962 NA other downstream 5173269 7284862 ~ 7289694 (-)
G76762 NA other downstream 5400142 7057805 ~ 7062821 (-)
AMCG00010082 NA other upstream 833620 13347541 ~ 13470255 (-)
AMCG00010142 LOC104932682,LOC108255669 other upstream 3695398 16209319 ~ 16224041 (-)
AMCG00010169 cnot6l,LOC107752360 other upstream 4768725 17282646 ~ 17295515 (-)
AMCG00010183 stoml2 other upstream 4959908 17473829 ~ 17478791 (-)
AMCG00010188 NA other upstream 5326786 17840707 ~ 17844389 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_029839 NA non-coding NC_007116.7 CM002889.2 6933062 ~ 6939709 (+)
eurasian perch (Perca fluviatilis) G63736 NA non-coding NC_053117.1 CM020914.1 21892510 ~ 21895497 (-)