G64821


Basic Information

Item Value
gene id G64821
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26440034 ~ 26447513 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU86779
tttacgCCTTAAAACAAGTCTTTACTGTCATATGgttaagaaataataaaaacgtGTGTCTTAAGTTCAAAAGACAGATGTGCATACAAGAGCAAAATatagaaaaactaaaatattgcCAACAACACATCAATGACAGCACAGTTAGATAGCACTGCTAAACAGAAGGGTGGAGGTCACTTACGCTTATaacagttaaatatatattattcctAAATGACCCAAATACAGAATGATAAAAGGCTGCACATGTAGTTAAGACAGTTTTAAAGGTTCAGtaggtaacttttttttaaaacaactttttgtcatatttgctgaaaacGGTAGCACATACGCAGACaatctgtgaaaaaaatcatgttCCTCTGCCTTTCTAAGTTTCCAAGATTAActaccaatcagagcagaggaaTCTCTACGCAGTGTCAATGACTGCTCGTGAACTGCAGTCAAACTGTCAAACTCATCAAATATGAATCAATATTCTGTTAGTGCATTGCCTATTTCTTGCCTCAAATTCTTTCAGAAAGATATTTTAGTGTGCAGTTTAGCTGAAACATGAGAAAGTTTGGTTGTTTTCCTAATGCCATTAGGAAcaccaggaggaggcagagggagGTGGATTTTTTTCCACAGATTATCTGATTTGTGTAagcaaatattaaaatattttttatcaaaGTTGccaactgtagctttaaatgacATCACTGAAACAAATACGGACACATTAAGTGACTGGACTGAATAGTGCGATTAGTTTTCAGTCTGTAGTTGTACTATGGCACTGACATTGAGATCATGCAGCTCCTGAtgataaatacagaaaatattaaCAAGATGGCACTTTCATTCAACTATAACATGATCCTAAGGCTGGTTGTGTCTCTTTATAACAAAGTAGTATTAGTTTGACTACTTGCATAGTAGCTTTTCAGCTTAAAGGCCTAATAAAATGCCTAGAATTAAGTTTGTAGTGTTGGCTACAAAATAAGGTTTCTAGTTTAGCACAATTAGGTACAAAGCATTCTTCGTTCTCTGCATGGACAGTTTACATCATTCACAATCACACTTGCATTTAACTGTGATAATATTTATTGCAGTATTAGACTAACGCAGTGAAGATTCCAGCATCCAGAGGTAAAGGTGATGGGCTCATAAGCTAACAGAAAAcacgttaaattaaaatatgttcaaaaCCGGTCAGAAGCTGATAGCAATATAAATGGAAAATGGTGCCGTCTGAAGCTTGGACTTGAGCAAAATGCATAATTCATACATATATTTCTGTAAATAAGATAGTGTGATGGCAAAACATCTTAGTACCATTATCACTGGAAGCTCTGTGGAGTCATAATTAAGATCAAAGACTAAATAATGGATATGTCTATGATAGTCATCCAGTATCAAAACGTTgtgttcacttttttttttcccagtccAACTCGGCAAACTTGTAacttatacaaaaaaataagataatCAGCGGGCCTATATGTGGATTGTAACTGGAGTTTGACAAGATGTTCAAGAAGCTCCTGAACAgctgatggatggatgtttggagggaagaagaagaagtggtATGCAGATAAAGATGATTTGATCCTGGATACCTTGACTCCTGGTGGACCTGCAGCATGGCAGCAGGCAGTGATTGATTCAGAGGAGGACCaggtatgtgtgcgtgtgcgtgtgtgtgtgtatatatattgtgacGTCACGAGAGGCTGTGTCCTGGACGGACGTTACATCCCCCTGAGATGTCTGCAAGCACAGACAGCTGTGGCTCCATCCGCTGGTATAATCGGGAAGTCCACCCCTCTGTGgccaatgttcccacacagcTGTGACAAATCAGGAGCTGATGAGCTGAAGGGTTTTTAAGGGATGGACACACACTTAGAGAggtctgtgtgtggtggggaGACATGGTCTCCAAGCTGGGCTCCCAGGAGGACGAGAGCGCTGTGCTGCTGTTGCCATGAGGAGTATGAAGAGTTGGAGAGACTTGTCTGTGGAGGAGACTCACTGTTGGAAGTGTTCACCTGTGGTGACTTACTGCTGGCTTGGCCACTAGCTGCAGCCTGGACTACCATAAGGCTGAGAAAAACTGTTTATTTTCCTGAGGGAGAGAATTATGATTTCAAGAGGCCGAAGAGACATCCCTGAAGTGTTGGCCCTTAAAGAGCAACAAGATGTCTGCATTCTATTATGTTTTCATTGACTTCCAAGAACTTTAATAAATTCCTTGTTATTATTTGAACCTCGTCTCCTTGCACTACTTGAGCCACCCCGCTGACAGCTGTGAAGCCTCTCATGACGTcacaatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgagggggTTGGTATCACCGTGTTTCCCTTTTGCTCTGATGCTTTCATTCATCTGATTTAATCTTCATCTGTGCCTGCATCTGAGCGATCATCTGCTGCATGCGTCTCAGCTCGGCCTCTTTCTGTAGCAGGATCTGGTCCTTGTCCATCACATCCTCATCCGCATCCCTGCCCACTCTCTTCAGCCTCTCTGAAC

Function

GO:

id name namespace
GO:0048513 animal organ development biological_process
GO:0007399 nervous system development biological_process
GO:0005634 nucleus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86779 True 2621 TUCP 0.41 3 26440034 26447513

Neighbor

gene id symbol gene type direction distance location
cldn5a cldn5,LOC103357131 coding downstream 25407 26412828 ~ 26414627 (-)
letm2 letm2 coding downstream 83196 26343941 ~ 26356838 (-)
prnpb NA coding downstream 97923 26338836 ~ 26342111 (-)
LOC120560807 NA coding downstream 101533 26333015 ~ 26338501 (-)
fahd2a LOC104967721,LOC104921636,LOC102798335 coding downstream 266149 26162568 ~ 26173885 (-)
mrpl40 mrpl40 coding upstream 48909 26496422 ~ 26499331 (-)
polb polb,LOC102781262 coding upstream 83829 26531342 ~ 26537704 (-)
enkd1 enkd1,LOC102781555 coding upstream 90557 26538070 ~ 26541738 (-)
ikbkb ikbkb coding upstream 106219 26553732 ~ 26572090 (-)
snap29 snap29 coding upstream 234983 26682496 ~ 26687397 (-)
G64786 NA non-coding downstream 56651 26323834 ~ 26383383 (-)
G64788 NA non-coding downstream 111636 26324902 ~ 26328398 (-)
G64768 NA non-coding downstream 118098 26303824 ~ 26321936 (-)
G64742 NA non-coding downstream 145414 26204295 ~ 26294620 (-)
G64735 NA non-coding downstream 194558 26191984 ~ 26245476 (-)
G64852 NA non-coding upstream 850 26448363 ~ 26462070 (-)
G64859 rpl6,LOC102780500 non-coding upstream 58332 26505845 ~ 26511346 (-)
LOC120561456 NA non-coding upstream 132366 26579879 ~ 26580815 (-)
LOC120560048 NA non-coding upstream 150980 26598493 ~ 26613017 (-)
G64933 NA non-coding upstream 210695 26658208 ~ 26658476 (-)
mrps36 mrps36 other downstream 776629 25659551 ~ 25663405 (-)
commd10 commd10,LOC102791033 other downstream 892182 25488482 ~ 25547852 (-)
mapkapk5 mapkapk5 other downstream 1334604 25089935 ~ 25105430 (-)
LOC120560369 LOC104950284,LOC103362719 other downstream 1359265 25066760 ~ 25080769 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other downstream 1423113 25001323 ~ 25016921 (-)
dynll1 LOC103397138,LOC103359517,LOC107554284,LOC100698873,LOC101063088 other upstream 21645 26469158 ~ 26514745 (-)
LOC120560729 pradc1,LOC102787255 other upstream 358119 26805632 ~ 26811330 (-)
sb:cb288 NA other upstream 440493 26888006 ~ 26891480 (-)
agpat9l LOC107089700,LOC106962842,LOC103145885 other upstream 464780 26912293 ~ 26924669 (-)
arl15a ndufs4,arl15 other upstream 564749 27012262 ~ 27174473 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000010_10003941_10010851 NA coding CI01000010 null 10002932 ~ 10010929 (-)