commd10 (commd10,LOC102791033)


Basic Information

Item Value
gene id commd10
gene name commd10,LOC102791033
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25488482 ~ 25547852 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803314.1
tatttatttctaCGGTTTATTAATTTTTCTCTGTCCTGTACTTCACTGGCACTGCACATTCTCGCGCAGCATTGACTGTCACGTGAGTCGTCTCGTGACAACAGGAAGAAGGAATGGCAACAGTGTAAGGATGCTGTTGCTGCTTTGACACTTTTCAACTCTGGATTTTAATATCTGCAGAAAGCGACAGACAACAATGGCTTCTTttataaaagaaacacaaagCATAAAAGAAGCGGTAACTTTCATCAACGCTATTGATGAGAACAAGTTCTCCAGGCTGATCTCCCGCATCATACAAAAGCTTCATCTGAAGGGAGAGCGGACATTcagtgaagaggaggaagaaaaactTCAGGCTGCCCTCTCATTGGATAAACAGGCTCTCAGTCTAGTCCTGGAAACAGCTGCCTTTATACTGGAGCAGGCAGTGTATCATAATGTAAAGCCGGCCTCTCTACAGCAACAGCTGGAGGGGGTTCATCTAAACCCAGACAAGGCTGAGGTGTTCTCTCAAACCTGGGCCAGTTTTGGACCTGAGCTGGTGGAGAAACTAAAGCACAATACCTTTGCCCCAAAGAAGCTGGAGTATGTCGGCTGGCAGTTGAACCTGCAGATGGCCCAGTCCAGCCAAGCCAGACTGAAGTCTCCCAGTGCTGTCCTCCAACTGGGGCTCCGCAATGAAGACTCTGaggttcaggaaaatgtctttgttgattttaaccacCAGGAGCTGCTTGACCTCTACAACAAGcttGAAATCGTGCAAGGCCAGTTGGATTCCCTGACCTGATGCCTggtgctctctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtgttttttCTGACAGCTATGCCAGCTGTTCCATTCTTGCTCTGATTTATTagagaaaaatgtcaaactttgaTGGAAGGAGTTTCTTTCCACTTTAAGCTCCTTTTATTCCAGGTTTGTGCTCATAACTTAGAGAGGCTGGTGTGATAAATTATGATAAATCTGATTGTTCTTGTAATTGTACTGAAACACATTTAGGAATTTTCTATGTCCAGCAGTtagtaacaaaaatgtttgatgGCCATAGGAATTAGTGCCAATAGTGATGATCGTGAATATTTGTTAAGGGAAATGCTATTTTGAGTTATAAACAAATTCATTTTGTAACGTGGAGAGGAACTAGTGTCCATGACATTCTAATAAAATCTGAAGTGGAGGtgaaatcca
>XR_005639498.1
tatttatttctaCGGTTTATTAATTTTTCTCTGTCCTGTACTTCACTGGCACTGCACATTCTCGCGCAGCATTGACTGTCACGTGAGTCGTCTCGTGACAACAGGAAGAAGGAATGGCAACAGTGTAAGGATGCTGTTGCTGCTTTGACACTTTTCAACTCTGGATTTTAATATCTGCAGAAAGCGACAGACAACAATGGCTTCTTttataaaagaaacacaaagCATAAAAGAAGCGGTAACTTTCATCAACGCTATTGATGAGAACAAGTTCTCCAGGCTGATCTCCCGCATCATACAAAAGCTTCATCTGAAGGGAGAGCGGACATTcagtgaagaggaggaagaaaaactTCAGGCTGCCCTCTCATTGGATAAACAGGCTCTCAGTCTAGTCCTGGAAACAGCTGCCTTTATACTGGAGCAGGCAGTGTATCATAATGTAAAGCCGGCCTCTCTACAGCAACAGCTGGAGGGGGTTCATCTAAACCCAGACAAGGCTGAGGTGTTCTCTCAAACCTGGGCCAGTTTTGGACCTGAGCTGGTGGAGAAACTAAAGCACAATACCTTTGCCCCAAAGAAGCTGGAGTATGTCGGCTGGCAGTTGAACCTGCAGATGGCCCAGTCCAGCCAAGCCAGACTGAAGTCTCCCAGTGCTGTCCTCCAACTGGGGCTCCGCAATGAAGACTCTGagATGAACCTTTGAACTCCCACTCCCCAATTCCCCATCTGCGTTCCTCGTCCTCCACAATGAATCAGAAGGCTTCCAACTAGAGAAACCTCAACCGTGTTAATGAGgttcaggaaaatgtctttgttgattttaaccacCAGGAGCTGCTTGACCTCTACAACAAG

Function

symbol description
commd10 Orthologous to human COMMD10 (COMM domain containing 10).

NR:

description
COMM domain-containing protein 10

GO: NA

KEGG:

id description
K22566 COMMD10; COMM domain containing 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803314.1 True 1329 mRNA 0.44 7 25488482 25547852
XR_005639498.1 False 858 transcript 0.47 7 25489965 25547852

Neighbor

gene id symbol gene type direction distance location
dmxl1 dmxl1 coding downstream 168395 25259941 ~ 25320087 (-)
prr16 prr16 coding downstream 256574 25219348 ~ 25231908 (-)
pheta1 fam109a,LOC102789093 coding downstream 273089 25210548 ~ 25215393 (-)
sh2b3 sh2b3,LOC104965654 coding downstream 280421 25146540 ~ 25208061 (-)
rnf122 rnf122 coding downstream 423276 25048422 ~ 25065206 (-)
LOC120560634 ap3s1 coding upstream 5566 25553418 ~ 25564593 (-)
cep78 NA coding upstream 33617 25581469 ~ 25598226 (-)
LOC120561271 LOC104930139,LOC104948670,LOC108233718,LOC107394162 coding upstream 116979 25664831 ~ 25669286 (-)
LOC120561270 LOC104948669,LOC108233717 coding upstream 121556 25669408 ~ 25672613 (-)
LOC120560926 LOC101488005,LOC107394164,LOC104930136,LOC103470078,LOC103366372 coding upstream 149166 25697018 ~ 25705444 (-)
LOC120560057 NA non-coding downstream 441435 25044895 ~ 25047047 (-)
G64250 NA non-coding downstream 1194526 24293653 ~ 24293956 (-)
G64249 NA non-coding downstream 1194883 24293015 ~ 24293599 (-)
G64234 gadd45g,LOC102775619 non-coding downstream 1273393 24213895 ~ 24215089 (-)
G64214 NA non-coding downstream 1314806 24173462 ~ 24173676 (-)
G64541 cdo1 non-coding upstream 22122 25569974 ~ 25625499 (-)
G64673 NA non-coding upstream 376717 25924569 ~ 25924785 (-)
G64693 NA non-coding upstream 403682 25951534 ~ 25952579 (-)
G64730 LOC104958878,LOC103357146,LOC107393839,LOC106513646,LOC107094516,LOC102798825 non-coding upstream 631297 26179149 ~ 26180205 (-)
G64735 NA non-coding upstream 644132 26191984 ~ 26245476 (-)
mapkapk5 mapkapk5 other downstream 383052 25089935 ~ 25105430 (-)
LOC120560369 LOC104950284,LOC103362719 other downstream 407713 25066760 ~ 25080769 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other downstream 471561 25001323 ~ 25016921 (-)
lzts3b lzts3,LOC102793849 other downstream 551042 24876595 ~ 24937440 (-)
foxd5 LOC103358907,LOC104942959 other downstream 2101177 23384718 ~ 23387305 (-)
mrps36 mrps36 other upstream 111699 25659551 ~ 25663405 (-)
G64821 NA other upstream 892182 26440034 ~ 26447513 (-)
dynll1 LOC103397138,LOC103359517,LOC107554284,LOC100698873,LOC101063088 other upstream 921306 26469158 ~ 26514745 (-)
LOC120560729 pradc1,LOC102787255 other upstream 1257780 26805632 ~ 26811330 (-)
sb:cb288 NA other upstream 1340154 26888006 ~ 26891480 (-)

Expression


Co-expression Network