pheta1 (fam109a,LOC102789093)


Basic Information

Item Value
gene id pheta1
gene name fam109a,LOC102789093
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25210548 ~ 25215393 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803484.1
TACCATAATGCAGGTAAAGCCGCATCCGGTAGCAGCTGTCTAAATGCCAACTTTCCAAGGGCAAAGACGAGGTGCGCATGTTTTAAGTCACCGCTCATCCGGATGACGAGAGATTCACAGCAGGAAAGTTGTAATGACGATCCCGCCCAGCCTATTGCGAGTGGATAGTGTCATTCAAATCATAcccaggagaaggagaaggagcagGCTAACCTCCCCGTCGTCACCACCGTCTCCTTCCGTAGGTTATCCGTGGCACTATCCATTCGCCATACCCAGTCGAGCTGTCCGCGCACCACACAACACGTGCCCCCTCCCTGTCGGTGACGTGCTCGGGAAGAAAACGGAAAGAAGAAAGAGCGATAAAGGGGAAAATAAACAACGGGGGAGATTGTCTGCCTGAGGAGGCGTCTTCATCTGCAGCCTTAATTTGGAGAGAccgaaaaagacaaaacaagatGGAGACATGTCAAGTGATTAGCTCCAGGTGTGATAGGAGGACAGTGGTGGATTTCAGCAGGTTAAGAGTTTAAACACATAAATAAAGAATCTACTAAGGAAAAGAAGGATGAAGCTGAACGAACGCAGCGTGGCGCACTACGCCACCTGTGACTCCCCGCCAGACAAGACAGGCTTCCTGTTCAAGAAGGGTGAGCGCAACACAGCGTATCACCGCCGCTGGTTTGTGCTGAAGGGTAACATGCTCTTCTACTTTGAGGAGCGCGACAGCCGAGAGCCCATCGGCGTCATCGTCCTTGAAGGATGCACCGTAGAGCTTTGCGAGTCAGCCGAGGAGTTTGCCTTCGCCATCAAGTTTGACTGCGCCAAAGCGCGGGTGTACAAGATGGCTGCTGAGAACCAAGCAGCCATGGAGTCATGGGTGAAAGCGTTGTCGAGGGCCAGCTTTGACTACATGAGGCTGGTGGTGAAGGAGCTGGAGAGGCAGCTGGAGGAGATCCAGGAGGCTGCAGGAGGTGGCTGTGTCGGGGCTGGAGTTGGAGGCCTGCAGGGCAGGCCTAAGTCGTCCTCCAGGCGAAACCAGGTGGTGGCACGCTCTAGGTCTGGAGCATCCTCTTCTACATCATCTTCATCTTCCATATCGTCATCATCAAGTGCCTCTCCCATGGCAGGCCCCTTCCCTGCCCAAAAGAGCCTCCAGGATGAGGTGCAGCTCTTCTCTGATTGTTCCAAGGAGAACGGAGTTGCATGGAGTAAACCGCCAGCTGCCTTTGCTAACGGCTTTGTTGAGGGAGCGTCTTCCTGTGTGGCCTGGGAAGCGTGCACAGACTCTGGGAATAACACTGTGATTGGTTATGGGGCTGATGGGATGAGGGCTCCACCAGTGCCACCCAGGAGAAGAGGAGCCTCTCTGGAAAGCCCAGTCTCCCCTGGCACTGGCTGCTTCTCCAAACTCCATGACTGGTACGGCAGAGAGGTGGAGGAACTGAGAGTGCAGTGGCTGCAGAGCCAGTGAAGTAATGGattatctctttttttccacatttttatcattccttccttcctgatCATTCTGCAATGTTAAACCCTTTTGAACTCAACTTAACAGGGCACAAAACTTATTTGCAAATTTCAGTCTTATCACCTATCAAAAAAGACAAATACTGATTTAAGAATGATTCCAGATCCTGTCTGGCACAGGGGAATCAATCTTCTGCATCAACACTATCCATTGTACAATCCAATACAAAATATGCTCTTTTCCacagtttttttaatgtaatttgcCATGGACAATTAAAATTAGTAGATACAATTTAGAAAAGTATGTGCTATTATTATATTGCCAATATTCAAGATTATTTCTGCCCTTCTAGCTTCCCAATGTACTTGTGCAATTGGGgtcagttttctttaaaattgtAGCAACCTTGATCTAAACCATGTTTTTCTTCAGGTATACATGGAAACTACGGTGTTAAGCATTTGAAAAATgggataaaattaaataaataactgctaaaatcaccacctttttttccaATCCCAGCCTGGCAAGGGTGTTTTTGTTATATGCCAATGACATAAAGAAGgccacatactgtaaataacGATCTGAAGTCATTGCACAAAACAAATCCACATGGATCAGGTTGCTATTGTATAGTGACACGTTATCCACGGCGTACAAAGGTGAATGTAACAGGAAGTCCTGCAGCTGTGTGATTgatgaaaaaatgataaaaaaaagctgtttaagtacAGTTAAGGATGTTTTTAATAATCTAATGTCAAGGGTACCAGGATAATtaacagcatgtttaaaaagaaattccTGTAAACTCTGGATAAGAAGTGTTTGGGCAAAACTAGTCCAGTTTCTCCTCCCTATTCCCAGCGGGATATATTCCACCCCAGAGACCCTTGTGGTTGCCAAGGTCAGAACATCCTGTTGCCAGTGTCTGGGGACCACGGTGGGAGCTGGATGTCTCGCTCAGAGCAACACGctggtatttttagcccttgCTAGCCAGCGGCCAGATGATGCTGTGTCACAAGGGTGCTTGTCACTTAGTTTTCTTTTGACTCTTCTTGAACTTACAGGACTTTAACACTTGTCATTGTAATTCTGTGACAATTTCATATCATACAATCAAGTCAACTTAATTTCatcatattgtttgtttgttacagCTGATTAACGTGAATGTTATGTTATGAGTGTAACTGTTAGAGGCCTATACTTTATTTAAACATCTAACCTCTtggtttgtatattaatattttacTCTTCCATGTTGGAAATTAATACCAGCAGTCTGAAAAAACAggcattttaaaacatttacttTTATAATTCTATATCCAATCACATAGCCGCTtacgtttttgttttatatgtgCCTTATGTTATATTTATTAACTGTTATTGCACTTGCAATCACTACcatactttctttctttctttgctaAGGCTCATGTTGTTGCAGTCACTTTTTGACAATGGCTTTCAGTCTGCATCATTGCGCAGCACCATCATTCCTGTCATACACTTGGCTTGTACAGTgtggattgttttttttcaaacggCTGCATCAGGGCGGTATGCTTTTGATAAGCATTAACTAaaattattgttgttgtaccaATTTTATTAACTCCAGAAGAGCATTACTGTAATTACAGatgacaagtctttttttttttctaacaatAATATTTAAAGGAAAATGTGATTGTGtcaaatcaaccatataaatgATCATCTTTATTCAAGAGTGCCAAATGAGGAATGCAACATAAATGCACAATTATTAAATTGTcacgtttttctttttcaattgaCTTCCACGATTGTAGTACACATTTTCAATGTTATAGTACACAATATGAGTATTATTTAAAATGACCAATAATATTAAACATATTGTCCTGACATGGTACCCTAAAAAGATGATTGTTAAAAAGCATTTGTTGTAAACCATTCAATAAACGGTGTCATTAATA
>XM_039803485.1
TTATATAGATAATACTGCCATACACTGTGAGTTTATCTAACTGACAGTGTATAAGTGCCAGCTAGATGCTCATTTGTATTCACTCAATAGGCTATGCGTTAGCTAGTTGACAAGAACAGATACTTTTCAGACAGTGTTCATTTATAGTTGTGTCCCTGTGATCTGAATTCCCGCAAAGTGCTGATGTGTCAAAAGCTTGTGACCAACCCCACTAGCCAACCAGCACCGATTGAGACTGAATCATTCGTCCAAGCACGATTATGCAAGCAGAGCCTTAATTTGGAGAGAccgaaaaagacaaaacaagatGGAGACATGTCAAGTGATTAGCTCCAGGTGTGATAGGAGGACAGTGGTGGATTTCAGCAGGTTAAGAGTTTAAACACATAAATAAAGAATCTACTAAGGAAAAGAAGGATGAAGCTGAACGAACGCAGCGTGGCGCACTACGCCACCTGTGACTCCCCGCCAGACAAGACAGGCTTCCTGTTCAAGAAGGGTGAGCGCAACACAGCGTATCACCGCCGCTGGTTTGTGCTGAAGGGTAACATGCTCTTCTACTTTGAGGAGCGCGACAGCCGAGAGCCCATCGGCGTCATCGTCCTTGAAGGATGCACCGTAGAGCTTTGCGAGTCAGCCGAGGAGTTTGCCTTCGCCATCAAGTTTGACTGCGCCAAAGCGCGGGTGTACAAGATGGCTGCTGAGAACCAAGCAGCCATGGAGTCATGGGTGAAAGCGTTGTCGAGGGCCAGCTTTGACTACATGAGGCTGGTGGTGAAGGAGCTGGAGAGGCAGCTGGAGGAGATCCAGGAGGCTGCAGGAGGTGGCTGTGTCGGGGCTGGAGTTGGAGGCCTGCAGGGCAGGCCTAAGTCGTCCTCCAGGCGAAACCAGGTGGTGGCACGCTCTAGGTCTGGAGCATCCTCTTCTACATCATCTTCATCTTCCATATCGTCATCATCAAGTGCCTCTCCCATGGCAGGCCCCTTCCCTGCCCAAAAGAGCCTCCAGGATGAGGTGCAGCTCTTCTCTGATTGTTCCAAGGAGAACGGAGTTGCATGGAGTAAACCGCCAGCTGCCTTTGCTAACGGCTTTGTTGAGGGAGCGTCTTCCTGTGTGGCCTGGGAAGCGTGCACAGACTCTGGGAATAACACTGTGATTGGTTATGGGGCTGATGGGATGAGGGCTCCACCAGTGCCACCCAGGAGAAGAGGAGCCTCTCTGGAAAGCCCAGTCTCCCCTGGCACTGGCTGCTTCTCCAAACTCCATGACTGGTACGGCAGAGAGGTGGAGGAACTGAGAGTGCAGTGGCTGCAGAGCCAGTGAAGTAATGGattatctctttttttccacatttttatcattccttccttcctgatCATTCTGCAATGTTAAACCCTTTTGAACTCAACTTAACAGGGCACAAAACTTATTTGCAAATTTCAGTCTTATCACCTATCAAAAAAGACAAATACTGATTTAAGAATGATTCCAGATCCTGTCTGGCACAGGGGAATCAATCTTCTGCATCAACACTATCCATTGTACAATCCAATACAAAATATGCTCTTTTCCacagtttttttaatgtaatttgcCATGGACAATTAAAATTAGTAGATACAATTTAGAAAAGTATGTGCTATTATTATATTGCCAATATTCAAGATTATTTCTGCCCTTCTAGCTTCCCAATGTACTTGTGCAATTGGGgtcagttttctttaaaattgtAGCAACCTTGATCTAAACCATGTTTTTCTTCAGGTATACATGGAAACTACGGTGTTAAGCATTTGAAAAATgggataaaattaaataaataactgctaaaatcaccacctttttttccaATCCCAGCCTGGCAAGGGTGTTTTTGTTATATGCCAATGACATAAAGAAGgccacatactgtaaataacGATCTGAAGTCATTGCACAAAACAAATCCACATGGATCAGGTTGCTATTGTATAGTGACACGTTATCCACGGCGTACAAAGGTGAATGTAACAGGAAGTCCTGCAGCTGTGTGATTgatgaaaaaatgataaaaaaaagctgtttaagtacAGTTAAGGATGTTTTTAATAATCTAATGTCAAGGGTACCAGGATAATtaacagcatgtttaaaaagaaattccTGTAAACTCTGGATAAGAAGTGTTTGGGCAAAACTAGTCCAGTTTCTCCTCCCTATTCCCAGCGGGATATATTCCACCCCAGAGACCCTTGTGGTTGCCAAGGTCAGAACATCCTGTTGCCAGTGTCTGGGGACCACGGTGGGAGCTGGATGTCTCGCTCAGAGCAACACGctggtatttttagcccttgCTAGCCAGCGGCCAGATGATGCTGTGTCACAAGGGTGCTTGTCACTTAGTTTTCTTTTGACTCTTCTTGAACTTACAGGACTTTAACACTTGTCATTGTAATTCTGTGACAATTTCATATCATACAATCAAGTCAACTTAATTTCatcatattgtttgtttgttacagCTGATTAACGTGAATGTTATGTTATGAGTGTAACTGTTAGAGGCCTATACTTTATTTAAACATCTAACCTCTtggtttgtatattaatattttacTCTTCCATGTTGGAAATTAATACCAGCAGTCTGAAAAAACAggcattttaaaacatttacttTTATAATTCTATATCCAATCACATAGCCGCTtacgtttttgttttatatgtgCCTTATGTTATATTTATTAACTGTTATTGCACTTGCAATCACTACcatactttctttctttctttgctaAGGCTCATGTTGTTGCAGTCACTTTTTGACAATGGCTTTCAGTCTGCATCATTGCGCAGCACCATCATTCCTGTCATACACTTGGCTTGTACAGTgtggattgttttttttcaaacggCTGCATCAGGGCGGTATGCTTTTGATAAGCATTAACTAaaattattgttgttgtaccaATTTTATTAACTCCAGAAGAGCATTACTGTAATTACAGatgacaagtctttttttttttctaacaatAATATTTAAAGGAAAATGTGATTGTGtcaaatcaaccatataaatgATCATCTTTATTCAAGAGTGCCAAATGAGGAATGCAACATAAATGCACAATTATTAAATTGTcacgtttttctttttcaattgaCTTCCACGATTGTAGTACACATTTTCAATGTTATAGTACACAATATGAGTATTATTTAAAATGACCAATAATATTAAACATATTGTCCTGACATGGTACCCTAAAAAGATGATTGTTAAAAAGCATTTGTTGTAAACCATTCAATAAACGGTGTCATTAATA

Function

NR:

description
sesquipedalian-1

GO: NA

KEGG:

id description
K23791 PHETA; sesquipedalian

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803484.1 True 3465 mRNA 0.43 3 25210548 25215393
XM_039803485.1 False 3314 mRNA 0.41 3 25210548 25214954

Neighbor

gene id symbol gene type direction distance location
sh2b3 sh2b3,LOC104965654 coding downstream 2487 25146540 ~ 25208061 (-)
rnf122 rnf122 coding downstream 145342 25048422 ~ 25065206 (-)
LOC120560055 LOC103362725 coding downstream 165656 25036062 ~ 25044892 (-)
LOC120561162 LOC101474940,LOC102208632,LOC102289757,LOC104920829,LOC103362721 coding downstream 176154 25027541 ~ 25034394 (-)
oxt LOC101478568,LOC104967804,LOC104920809,LOC102782130 coding downstream 287738 24920760 ~ 24922810 (-)
prr16 prr16 coding upstream 3955 25219348 ~ 25231908 (-)
dmxl1 dmxl1 coding upstream 44548 25259941 ~ 25320087 (-)
LOC120560634 ap3s1 coding upstream 338025 25553418 ~ 25564593 (-)
cep78 NA coding upstream 366076 25581469 ~ 25598226 (-)
LOC120561271 LOC104930139,LOC104948670,LOC108233718,LOC107394162 coding upstream 449438 25664831 ~ 25669286 (-)
LOC120560057 NA non-coding downstream 163501 25044895 ~ 25047047 (-)
G64250 NA non-coding downstream 916592 24293653 ~ 24293956 (-)
G64249 NA non-coding downstream 916949 24293015 ~ 24293599 (-)
G64234 gadd45g,LOC102775619 non-coding downstream 995459 24213895 ~ 24215089 (-)
G64214 NA non-coding downstream 1036872 24173462 ~ 24173676 (-)
G64541 cdo1 non-coding upstream 354581 25569974 ~ 25625499 (-)
G64673 NA non-coding upstream 709176 25924569 ~ 25924785 (-)
G64693 NA non-coding upstream 736141 25951534 ~ 25952579 (-)
G64730 LOC104958878,LOC103357146,LOC107393839,LOC106513646,LOC107094516,LOC102798825 non-coding upstream 963756 26179149 ~ 26180205 (-)
G64735 NA non-coding upstream 976591 26191984 ~ 26245476 (-)
mapkapk5 mapkapk5 other downstream 105118 25089935 ~ 25105430 (-)
LOC120560369 LOC104950284,LOC103362719 other downstream 129779 25066760 ~ 25080769 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other downstream 193627 25001323 ~ 25016921 (-)
lzts3b lzts3,LOC102793849 other downstream 273108 24876595 ~ 24937440 (-)
foxd5 LOC103358907,LOC104942959 other downstream 1823243 23384718 ~ 23387305 (-)
commd10 commd10,LOC102791033 other upstream 273089 25488482 ~ 25547852 (-)
mrps36 mrps36 other upstream 444158 25659551 ~ 25663405 (-)
G64821 NA other upstream 1224641 26440034 ~ 26447513 (-)
dynll1 LOC103397138,LOC103359517,LOC107554284,LOC100698873,LOC101063088 other upstream 1253765 26469158 ~ 26514745 (-)
LOC120560729 pradc1,LOC102787255 other upstream 1590239 26805632 ~ 26811330 (-)

Expression


Co-expression Network