G64234 (gadd45g,LOC102775619)


Basic Information

Item Value
gene id G64234
gene name gadd45g,LOC102775619
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 24213895 ~ 24215089 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU86025
TTGATTTCAAATGTTTattcacaaaacattaaaaatgtgTACAATTCAAACAATATTGCATATTTGTCTGCATATttcaaagtaataataatagtccATGAGAAAGTGTCACAGGTTCAGACACAGCTCAAATCAGGATTTACAAGCAAAGTCTCTGCTTATTCCAAGAACTTCCTGATAGCTGcactgtaaaaagaaaagttaagTCCATTTAGACATTTCAGACACCTTCTTCTGAACCAGCATCTTCCTTGTTACCCTCTGATGAGATTCAGTCCAGCCTCTGCACTTTCACAAGTCCATTTCTTGCAAGGTCTCTGTGACCTGCTCCGCTCAGTTCCCCATTGCCTTTTAACTAGGGCAGCAGCAGGGACGCCACTTCTCGTCTATTCATGCACTTTGCAGTACATTCCAAATCCTTCTGTGTCCATCAGGCTTTCTGTCCATTCCACATTCACCTGACCCAGTCTGCACTTGACTTCTGAACTTGAACCCTTCCTCAGGGTAATCCAGAACCAACGTGCTGACCCAGAATGCACTGGTAGGTTGTGCTCTTGCAGGGGGTTACAGCCACAGCCCCTTAATCCAGAAAGTGAGGCAGAAAGGCTTCACAACCCCAACTGAGGCTCAGCTCCTTGACTTTCttttcatcatcttcatcatcatcatgtgaAGCATTGTTAGTGGGATGTCACTTCAGCGCTCTGGGAGCGTGATGGTGGGCACCCAGTCGTACACACTGCGGCTCTCCTCACAGAACAGGCTCAACTTGTCCAGAGCCGGGTCTTTCCATGGGTTTGCACTGGGgcCGTGACAAGAATGCAGTGCGCGTCCTTGGGCTCGCCGGTCTCGTCTGCGCTCACGAGGTCGGCCAGGCGCTCGATGTCATTGACGCGCACCACGTTGATGTCGTTATCGAAGCAGAACGCCTGGATGAGGGTGAAGTGGATCTGGAGAGCAATGTCACATTCGTACTCCTCATCGGTGGCGAGGACGCAGAATGCCACGCTGTCTG

Function

symbol description
gadd45g Predicted to enable identical protein binding activity. Involved in positive regulation of JNK cascade; positive regulation of apoptotic process; and positive regulation of p38MAPK cascade. Located in cytoplasm and nucleus.

NR:

description
PREDICTED: growth arrest and DNA damage-inducible protein GADD45 gamma

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86025 True 1015 lncRNA 0.48 2 24213895 24215089

Neighbor

gene id symbol gene type direction distance location
LOC120560666 selenop coding downstream 44200 24166092 ~ 24169695 (-)
oxct1a oxct1 coding downstream 109787 24049943 ~ 24104108 (-)
plcxd3 plcxd3 coding downstream 166141 24032140 ~ 24047754 (-)
c7a NA coding downstream 187998 24015113 ~ 24025897 (-)
LOC120561045 NA coding downstream 222765 23986097 ~ 23991130 (-)
LOC120561047 NA coding upstream 83907 24298996 ~ 24300405 (-)
efna5b efna5,LOC103397673,LOC100702629 coding upstream 191089 24406178 ~ 24497987 (-)
fbxl17 fbxl17,LOC102776382 coding upstream 368199 24583288 ~ 24820851 (-)
LOC120560316 NA coding upstream 622572 24837661 ~ 24842186 (-)
slc35d2 slc35d2 coding upstream 633917 24849006 ~ 24855441 (-)
G64214 NA non-coding downstream 40219 24173462 ~ 24173676 (-)
G64209 NA non-coding downstream 59216 24151066 ~ 24154679 (-)
G64206 NA non-coding downstream 68122 24145447 ~ 24145773 (-)
G64166 NA non-coding downstream 220029 23993613 ~ 23993866 (-)
G64165 NA non-coding downstream 220592 23992833 ~ 23993303 (-)
G64249 NA non-coding upstream 77926 24293015 ~ 24293599 (-)
G64250 NA non-coding upstream 78564 24293653 ~ 24293956 (-)
LOC120560057 NA non-coding upstream 829806 25044895 ~ 25047047 (-)
G64541 cdo1 non-coding upstream 1354885 25569974 ~ 25625499 (-)
G64673 NA non-coding upstream 1709480 25924569 ~ 25924785 (-)
foxd5 LOC103358907,LOC104942959 other downstream 826590 23384718 ~ 23387305 (-)
smim15 smim15,LOC106580593,LOC103398561 other downstream 932767 23274919 ~ 23281128 (-)
G63882 LOC104956296,LOC101068944 other downstream 1380806 22830195 ~ 22833089 (-)
LOC120560435 idnk other downstream 2522345 21681976 ~ 21691550 (-)
rmi1 rmi1 other downstream 2586874 21616223 ~ 21627021 (-)
lzts3b lzts3,LOC102793849 other upstream 661506 24876595 ~ 24937440 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other upstream 786234 25001323 ~ 25016921 (-)
LOC120560369 LOC104950284,LOC103362719 other upstream 851671 25066760 ~ 25080769 (-)
mapkapk5 mapkapk5 other upstream 874846 25089935 ~ 25105430 (-)
commd10 commd10,LOC102791033 other upstream 1273393 25488482 ~ 25547852 (-)

Expression


Co-expression Network