LOC120561045


Basic Information

Item Value
gene id LOC120561045
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 23986097 ~ 23991130 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804013.1
tgctgACACAAGTTATATTAGAACACAGAACTTCTATTAGAACACAGAGGGTTCTATGATCTCACAGTGTATTAACTCCATACTACAcacaacagttcagtttagcattcTTCTtcacagtgaacacaacattttaGCACAGATTTTCTGTACTTAAGAAGAGAAAACCTGAAGAGAGAAAGctcagagaaaagaaagaaaaacaagtcaATCCAGTTCATCTGAAGAATTCTGTTTCAAGTGACATGGACAAAGAAGCAGAGGACATGGACGACATCTCCAGCACTCCTCTGTTCTCCATGAGCTCAGCGACCACTGAGGATCTTGCGGATGTTGATAAGCTGATCCATCGTGATGATGTTTCAGAGGACCAAGAGGTCACCGGGCTGAGGAACCATTCAGTCATCAGTGATGAGAGCGGGTTGGCATACCCCTCTTCTTGGTGTTCCTCCCTGGATTCAGACATCCCAGATCTGATCACACCTTCTGATCAGAATATCGACAAGGAGATTAAACAAGTATGCCAAAACTTCTTTAATCTAGAGAACTTCGAGACAGAAGCCGATGATTTTGGAGAAAACGAGGATGTCTGGACCACCGATACAGGATCAACCTCCAGTCTTGCTATCAGGTCAAATGAGAGCACGGTACCTGCCTTAtgtccctcttcttcctcctccaacACAGCCATCACTAAGGCAGATAAGATGCTGATGCAGTCCACTGAGGCTGTCAAGATTCAGACAGACAATTATTTAGAACATGACAGTAAAGAGGTGATGATGGAAGGAGGATGTAAAGGCAAGTTGAAGAGGTTTTTCAGTGGAAGGCGGAAAAATAGGGTTCAGACAGCTCCATTAGAACATTTGAATGACCTGTCATCTGGGAGCCAACAGGGCTCTCTTTGTTCTGAAGAGATGCCCCCCACCTCCTGCAGTGCTGCTCTGGGAGCAGATGTTAGGTCCGCTCAGCTACAGAGAGTGGACTACACGGATCAGACACCAGAAGACACCAGAAATGTTCTCTCATCTCTGTCCTCTGCCACCTCGAGTCCACCTGATTATCGGGTTGTTGAGATCATTTGGGCCAAATGCCCAGAGGACCCACCTCTGACTGAATCTACGACTGATGAGTTCCAAGAAGAGGTGAGCTCTTCTTTGAGTCAACAGTCCACTGACTTTAGTGAGGAGGACGAAGAACCCTTCAGCCAGAGCTCTGTGGAGCAGTCTCAGTCTGACTCTGAGTGTCTCAGCAATAACCAAAGTGATGCTGAGGAGACCAAGGCAAAGAGGAGCAACAACTTCTCACGCTTCATCTGTAAAATCTTGTCAAAGAATTCTGTTTCAAGTGACTTGGACAAAGAAGCAGAGGACATGGACGACATCTCCAGCACTCCTCTGTTCTCCATGAGCTCAGCGACCACTGAGGATCTTGCAGATGTTGATGAGCTGATCCATCGTGATGATGTTTCAGAGGACCAAGAGGTCACCGGGCTGAGGAACCATTCAGTCATCAGTGATGAGAGCGGGTTGGCATACCCCTCTTCTTGGTGTTCCTCCCTGGATTCAGACATCTCAGATATGATCACACCTTCTGATCAGAATATCGACAAGGAGATTAAACAAGTATGCCAAAACTTCTTTAATCTAGAGAACTTCGAGACAGAAGCCGATGATTTTGGAGAAAACAAGGATGTCCGGACAACCGATACAGGATCAACCTCCAGTCTTGCTATCAGGTCAAATGAGTGCACGGTACCTGCCTTAtgtccctcttcttcctcctccaacACAGCCATCACTAAGGCAGATAAGATGCTGATGCAGTCCACTGAGGCTGTTAAGATTCAGACAGACAATTATTTAGAACATGACAGTAAAGAGGTGATGATGGAAGGAGGATGTAAAGGCAAGTTGAAGAGGTTTTTCAGTGGAAGGCGGAAAAATAGGGTTCAGCCAGCTCCATTAGAACATTTGAATGACCTGTCATCTGGGAGCCAACAGGGCTCTCTTTGTTCTGAAGAAATGCCCCCCACCTCCTGCAGTGCTGCTCTGGGAGCAGATGTTAGGTCCGCTCAGCTACAGAGAGTGGACTACACGGAGGACGAGGATCAGACACCAGAAGACACCAGAAATGTTCTCTCATCTCTGTCCTCTGCCACCTCGATTCCACCTGATTATCGGGTTGTTGAGATCATTTCGGCCAAACGCCCAGAGGACCCACCTCTGACTGAATCTACGACTGATGAGTTCCAAGAAGAGGTGAGCTCTTCTTTGAGTCAACAGTCCACTGACTTTAGTGAGGAGGACGAAGAACCCTTCAGCCAGAGCTCTGTGGAGCAGTCTCAGTCTGACTCTGAGTGTCTCAGCAATAACCAAAGTGATGCTGAGGAGACCAAGGCAAAGAGGAGCAACAACTTCTCACGCTTCATCTGTAAAATCTTGTCAAAGAATTCTGTTTCAAGTGACTTGGACAAAGAAGCAGAGGACATGGACGACATCTCCAGCACTCCTCTGTTCTCCATGAGCTCAGCGACCACTGAGGATCTTGCAGATGTTGATGAGCTGATGCATCGTGATGATGTTTCAGAGGACCAAGAGGTCACCGGGCTGAGGAACCATTCAGTCATCAGTGATGAGAGCGGGTTGGCATACCCCTCTTCTTGGTGTTCCTCCCTGGATTCAGACATCTCAGATATGATCACACCTTTTGATCAGAATATCGACAAGGAGATTAAACAAGTATGCCAAAACTTCTTTAATCTAGAGAACTTCGAGACAAAAGCCGATGATTTTGGAGAAAACGAGGATGTCCGGACAACCGATACAGGAACAACCTCCAGTCTTGCTATCAGGTCAAATGAGAGCACGGTACCTGCCTTAtgtccctcttcttcctcctccaacACAGCCATCACTAAGGCAGACAAGATGCTAATCTCCCAGGTGATTGATGAGACTGTAAAGACACCGCAGTCCACTGAGACTGTAAAGACGCCGCAGTCCACTGAGACTGTAAAGACGCCGCAGTCCACTGAGACTGTAAAGACACCGCAGTCCACTGAGGCCGTAAAGACGCCGCAGTGCACTGAGGCCGTAAAGACGCCGCAGTCCACTGAGGCCGTAAAGAAGCCGCAGTCAACTGAGGCCGTAAAGACGCCGCAGTCAACTGAGGCCGTAAAGACGCCGCAGTCAACTGAGCCGTAAAGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804013.1 True 3211 mRNA 0.48 4 23986097 23991130

Neighbor

gene id symbol gene type direction distance location
htr1aa htr1a,LOC102795852,LOC103358896 coding downstream 3968 23980213 ~ 23982129 (-)
hsd17b3 NA coding downstream 236258 23742785 ~ 23749839 (-)
ptch1 ptch1,LOC103398858 coding downstream 314524 23611377 ~ 23671573 (-)
fancc LOC104947785 coding downstream 390473 23563479 ~ 23595624 (-)
cbwd cbwd1,cbwd3 coding downstream 582784 23387764 ~ 23403313 (-)
c7a NA coding upstream 23983 24015113 ~ 24025897 (-)
plcxd3 plcxd3 coding upstream 41010 24032140 ~ 24047754 (-)
oxct1a oxct1 coding upstream 58813 24049943 ~ 24104108 (-)
LOC120560666 selenop coding upstream 174962 24166092 ~ 24169695 (-)
LOC120561047 NA coding upstream 307866 24298996 ~ 24300405 (-)
G64122 NA non-coding downstream 262916 23722937 ~ 23723181 (-)
G64107 NA non-coding downstream 293498 23691686 ~ 23692599 (-)
G64059 dock8 non-coding downstream 498613 23484848 ~ 23487484 (-)
G63916 NA non-coding downstream 987907 22967916 ~ 22998190 (-)
G64165 NA non-coding upstream 1703 23992833 ~ 23993303 (-)
G64166 NA non-coding upstream 2483 23993613 ~ 23993866 (-)
G64206 NA non-coding upstream 154317 24145447 ~ 24145773 (-)
G64209 NA non-coding upstream 159936 24151066 ~ 24154679 (-)
G64214 NA non-coding upstream 182332 24173462 ~ 24173676 (-)
foxd5 LOC103358907,LOC104942959 other downstream 598792 23384718 ~ 23387305 (-)
smim15 smim15,LOC106580593,LOC103398561 other downstream 704969 23274919 ~ 23281128 (-)
G63882 LOC104956296,LOC101068944 other downstream 1153008 22830195 ~ 22833089 (-)
LOC120560435 idnk other downstream 2294547 21681976 ~ 21691550 (-)
rmi1 rmi1 other downstream 2359076 21616223 ~ 21627021 (-)
lzts3b lzts3,LOC102793849 other upstream 885465 24876595 ~ 24937440 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other upstream 1010193 25001323 ~ 25016921 (-)
LOC120560369 LOC104950284,LOC103362719 other upstream 1075630 25066760 ~ 25080769 (-)
mapkapk5 mapkapk5 other upstream 1098805 25089935 ~ 25105430 (-)
commd10 commd10,LOC102791033 other upstream 1497352 25488482 ~ 25547852 (-)

Expression


Co-expression Network