prr16 (prr16)


Basic Information

Item Value
gene id prr16
gene name prr16
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25219348 ~ 25231908 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803486.1
TAGACTCTCCAAGGATGCTGCGATGGAGACAGGATGAAACTGACGGGGTGTTTTTCGGAGGAAAGTGCCTCTGGGGTGTCGTTACCTGGCGGCTTTCCAGGGTGTCTCGGTACCAGAAACGTATATTTGAGGAAAAAGAATGAGTGTATTACCATTTTGTCGATGCCTGAGGATTATGGACCATTACAGTAACGACCGGCTGTGTAACGGTTTGGATAACTGCCTGTGtactctttcttcctcttcgtGTCCTTCTCTTTATCAACTAGGCGAAAGCCAACACATTTTCAGTGCATTCGTGTTGGACGTTTTCTCACAAAATGTTGAATTTAGCGCTCTCTCGACGTGAAGGATATTCGTGGCACGccgttttttgtgtgttggacATGAAGGTGTGAGGTGCAGTAACCTGTGGACGGGCGCCGTTTCGCAGACAGTATGATACAATATTTTGACAtaacctttatttttttgtgttacgcTCTATTGCGCATGCCTAGCGGTAGGCTATATACAGAACGCTGCCCGACACCACTTCGCTCTGTCCTGGCCGTGATGTAGGAGCAAAAGTGAAGGGAACAGCGGAGGACTAAATAAAAATGCGTTGGCAAAGTGGCAGCGTGGCGACCAAAGGATTTTACTTTAGATCCTTCACGAAATAAATTGTGCCATAAACTGAAGAATGTCAGGGTCACCTAATGCAGAGGCTGAAGGAGTAGTCTCCAAAGTAAAAGTGAAAAAGGAGATCAAGACAATCGTGGAGAATTTGGAAACCATCCTGGGAGACCTCAAGGATGTGGCCAAAGAGCTGAAAGAGGTTGTTCATGACATTGACACCCTGACTTGTGACCTGCAGCTGGAGGAAGATGGACTGACAGACAGCTCGAAGACAGACACGCTCAACTCCAGCTCAAgttccaccaccaccactaccacaGCTTCCAGCCTGGAGAAGATGAAGCTCTTTCCTGATGACTGCATGTTCAGACCACCTGCGCTCATCGACCCAGTCCCTGTCAACCCTCTTGCACTCCTGACTGTACTCAAGAAACCCCGTCCTCCCCTACCGCCACCCAGACTTACCCCTCTGAGAGCCGAGGATCACAACATTAAGAATCTGCCTCATCCGACATTAGTGTTATCAGGGAATATATCCAAGGCTACCCCGTCTCTAATGAGGAATGGCGGGGGTTTTCCATTGAAACCAAACAGGGATTTATTCTCCTCCACGCCGTGTTTCATTTCTAATGACAGTGGAGTCCCTGAGTCGGGTCTTGTTCCCACATTACCCAGGCCCATGCCCCTTCTCCACCATGAAAAGAACAAATGCCCCAAAGCCACTGGGAGGGAGTCTCGTGAGAGGGAGCGTGTGCGTTTCAGTGAGAAGGTCCAGTACCACGGCTACTGCCCAGACTGTGACCTCCAATATGATGTGGACGACACAGAACTACACCTACAGGCTGAGCTGAACGACCTGCGGCTCAGCCCAGTGCATTGCTGCTCTTCcatctcccctcctcctcctcctcatggTCTTCCACATGAACTAATGTTGGAAAATGGCAGCCTCTCGGTCAGCCACAGTTTCCAGCCGAAAGCAAACACACCTCCACCTTGTGTGCCTCCTCACCCCCCTTCCCATAAGCCCCAAAAAACAATCCTACGCAAATCAACCACTACCACGGTTTGACGCTGAACCCCCTTGTTCTGTTTAACTTAAACGTTCTTGAATCATTCATAGTGTTTTCTACTTTATGAGCGCTTTCTACTCCAGTTAAACTTTGGATTATCCAAACAGAAAAAGGAAGAGTTGGGAAAAGGATGGATCAAGTAAGTGGAACAGAAAGGAAGGCATCGCCATGGCCGCTGAGACGTACACAGAGAGATCAGGAAGAAGCGGGCCATAAGAGTGGAAGGGATGCTTGTTTCATACACTGATCGACCCTGGTTGATCAGGTCGGGAGGAGCCAGAGCTGAGGCCAAGCatcaacctttttttcttttttacatatgTCACTAATGGCTCTCAATCACCAGGAGATCATCTAGACAAATTCATACTTTTACCTTTGAGCATTGAACAACCTCTAGGCACAGTTGTTCCAGGGCAAAATGCTGCTGTGAAACTGGGGAAATAGGGAGGGCAGTCACTTTATGTACATGTAAGTGTATACAGATCAATGGATTTATAGTTGTGGAGGTGATATTTTCCGTACATAGAAATAGTTGAATTAAAGATTAGAATGCTGCTGAAACCCTATCATCAAAAGTAAAGAGGCAAGTTTAGATGAAGAGGTACAACATGGGGTGAAATGATGCCAGTATTTGATTGATGTCTATACAGACTTTTGCTGTGTGCATACTCAGATGGAAATCAATAGCTCCACTCAACCGATGGAATTTGCTTTTTAAGAATTGTAATTGTTTGTGTCTGGAGAGCCCGACAAGTCTGCCTGTGAGCAAAACACTGCTGGACTGCAGATAAGGACAACATATTATTTTGTCAGCATGTGACATATGCTCAATCATAGACAGGTTTGGAAAGGGCGGAAATGAATGAAGATGTGGTCACTGCTCTGTGTCCAGACATTATCTATTGTCCATTGTACATCAGAATCTATGTGCTCAACTCGTGCCATGACAAAATAACATGCAGAGATACAGTATAGTGCCATAGTTACAGCTTTAAAGGAACCTTGAAGAAGTAATAATTTGCATCAAATTTTCTTtgtatacaaaaatatatgtacatatttGATATCTATATATTTCAGGCATTTTTCTACTGAGACTTTAACATTTAAAGAGATAATATTTTTGATATTGTGTTGGATGACTGAAGGTACTTTGACGAAAGCTGACATTCCCCCGAAGTACGTGTTTTtcagcagggcatagcaggaggagttatttatatatagcaACGGGATGGTGTTTGTATAGATGAAAAAACAAGTGCTTCATTAATATCACTTCAAGAAACTTTACAGAAGGGGCTGTATTGTGAGAAAGGTGGAGAAGATTAATGGCGTTAACCAAATACCTAGTTGTGCTTTATCAGACAGGAGGCATGgggctgaatgaatgaaagcaTGACTGACTCTTCACTTTGTCCTGCCATCACTGTGTTTTTCTATGCATTTCTGTGGAGAGGCTGTCTGTTGGTGGGTCCAACATGCAGGGTGCTCTGCTCTCCATAACACAGAGTTAAGAAGTAGTCTCTCACATTTACTCATATGATGTCCATCAGGTTATTTCTGCAGCCACTATAAACCTGACAAATGTCCTGTTTATCACATTGTTTAGGCCAATGACATACTtagtaattaaataataataaaagtgtaTTCATATAGCCAGAAGATTATGAAGtacaaactgaaaaataaagagAATAAAAGGGAAGAATaggaaacacattttcataGGCCATTTTTGAATAATACAATTGTGGGAAACATACAATGGAGAGCAACAACACAGCCTCTCTCCATATTCAGATTGGAGGCACCACAAATGAACTCCACCTCTTTGTTCTCACTGGACACAAAGACTGAATTCATGATCAAACTCTGGATCAATCAAGAATCAGTTTTAAAGATGATTGGAACGTCTCAAAAAGCTGTCGGTGATATTTTGTTGCGTGTCCACAAactgttggaaaaaaaacttgtgAGAAGTAAACACTTTACACATAA

Function

symbol description
prr16 Predicted to be involved in positive regulation of cell size and positive regulation of translation. Orthologous to human PRR16 (proline rich 16).

NR:

description
PREDICTED: proline-rich protein 16

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803486.1 True 3698 mRNA 0.44 3 25219348 25231908

Neighbor

gene id symbol gene type direction distance location
pheta1 fam109a,LOC102789093 coding downstream 3955 25210548 ~ 25215393 (-)
sh2b3 sh2b3,LOC104965654 coding downstream 11287 25146540 ~ 25208061 (-)
rnf122 rnf122 coding downstream 154142 25048422 ~ 25065206 (-)
LOC120560055 LOC103362725 coding downstream 174456 25036062 ~ 25044892 (-)
LOC120561162 LOC101474940,LOC102208632,LOC102289757,LOC104920829,LOC103362721 coding downstream 184954 25027541 ~ 25034394 (-)
dmxl1 dmxl1 coding upstream 28033 25259941 ~ 25320087 (-)
LOC120560634 ap3s1 coding upstream 321510 25553418 ~ 25564593 (-)
cep78 NA coding upstream 349561 25581469 ~ 25598226 (-)
LOC120561271 LOC104930139,LOC104948670,LOC108233718,LOC107394162 coding upstream 432923 25664831 ~ 25669286 (-)
LOC120561270 LOC104948669,LOC108233717 coding upstream 437500 25669408 ~ 25672613 (-)
LOC120560057 NA non-coding downstream 172301 25044895 ~ 25047047 (-)
G64250 NA non-coding downstream 925392 24293653 ~ 24293956 (-)
G64249 NA non-coding downstream 925749 24293015 ~ 24293599 (-)
G64234 gadd45g,LOC102775619 non-coding downstream 1004259 24213895 ~ 24215089 (-)
G64214 NA non-coding downstream 1045672 24173462 ~ 24173676 (-)
G64541 cdo1 non-coding upstream 338066 25569974 ~ 25625499 (-)
G64673 NA non-coding upstream 692661 25924569 ~ 25924785 (-)
G64693 NA non-coding upstream 719626 25951534 ~ 25952579 (-)
G64730 LOC104958878,LOC103357146,LOC107393839,LOC106513646,LOC107094516,LOC102798825 non-coding upstream 947241 26179149 ~ 26180205 (-)
G64735 NA non-coding upstream 960076 26191984 ~ 26245476 (-)
mapkapk5 mapkapk5 other downstream 113918 25089935 ~ 25105430 (-)
LOC120560369 LOC104950284,LOC103362719 other downstream 138579 25066760 ~ 25080769 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other downstream 202427 25001323 ~ 25016921 (-)
lzts3b lzts3,LOC102793849 other downstream 281908 24876595 ~ 24937440 (-)
foxd5 LOC103358907,LOC104942959 other downstream 1832043 23384718 ~ 23387305 (-)
commd10 commd10,LOC102791033 other upstream 256574 25488482 ~ 25547852 (-)
mrps36 mrps36 other upstream 427643 25659551 ~ 25663405 (-)
G64821 NA other upstream 1208126 26440034 ~ 26447513 (-)
dynll1 LOC103397138,LOC103359517,LOC107554284,LOC100698873,LOC101063088 other upstream 1237250 26469158 ~ 26514745 (-)
LOC120560729 pradc1,LOC102787255 other upstream 1573724 26805632 ~ 26811330 (-)

Expression


Co-expression Network