Gene
RNA
| Item | Value |
|---|---|
| gene id | G296138 |
| gene name | NA |
| gene type | unknown |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 15223646 ~ 15305400 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU350716 | True | 535 | TUCP | 0.50 | 2 | 15223646 | 15305400 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hddc2 | hddc2 | coding | upstream | 382345 | 14837944 ~ 14841301 (+) |
| esco2 | esco2 | coding | upstream | 516618 | 14697281 ~ 14707028 (+) |
| scara3 | scara3 | coding | upstream | 563700 | 14645633 ~ 14659946 (+) |
| reps1 | reps1,LOC107727647 | coding | upstream | 602748 | 14597191 ~ 14620898 (+) |
| papola | papola | coding | upstream | 800474 | 14403617 ~ 14423172 (+) |
| serinc1 | serinc1,LOC107598085,LOC107675084,LOC107675227 | coding | downstream | 9653 | 15315053 ~ 15322483 (+) |
| trnaa-cgc_8 | NA | coding | downstream | 30784 | 15336184 ~ 15336256 (+) |
| LOC113532226 | LOC108257938 | coding | downstream | 179691 | 15485091 ~ 15487397 (+) |
| tbc1d32 | tbc1d32,LOC107580719 | coding | downstream | 201459 | 15506859 ~ 15557349 (+) |
| man1a1 | man1a1,LOC106607779,LOC107727625,LOC106571376 | coding | downstream | 346767 | 15652167 ~ 15762183 (+) |
| G295917 | NA | non-coding | upstream | 353374 | 14843050 ~ 14870272 (+) |
| G295896 | NA | non-coding | upstream | 447714 | 14775723 ~ 14775932 (+) |
| G295852 | NA | non-coding | upstream | 503678 | 14718285 ~ 14719968 (+) |
| G295822 | NA | non-coding | upstream | 557879 | 14665532 ~ 14665767 (+) |
| G295818 | NA | non-coding | upstream | 559265 | 14664093 ~ 14664381 (+) |
| G296181 | NA | non-coding | downstream | 161 | 15305561 ~ 15305765 (+) |
| G296151 | hsf2 | non-coding | downstream | 18449 | 15323849 ~ 15324587 (+) |
| G296240 | NA | non-coding | downstream | 89419 | 15394819 ~ 15395021 (+) |
| G296247 | NA | non-coding | downstream | 150882 | 15456282 ~ 15501827 (+) |
| G296249 | cx32,cx32.2,LOC108257940,LOC108424424,LOC107602176,LOC107727577,LOC107675217 | non-coding | downstream | 169458 | 15474858 ~ 15476834 (+) |
| trdn | trdn,fbrsl1 | other | upstream | 34034 | 15123767 ~ 15189612 (+) |
| trnas-gcu_16 | NA | other | upstream | 836089 | 14387476 ~ 14387557 (+) |
| trnas-gcu_14 | NA | other | upstream | 838141 | 14385424 ~ 14385505 (+) |
| trnas-gcu_13 | NA | other | upstream | 839259 | 14384306 ~ 14384387 (+) |
| trnas-gcu_11 | NA | other | upstream | 840894 | 14382538 ~ 14382752 (+) |
| G296430 | LOC108257881,LOC107603058 | other | downstream | 860998 | 16166398 ~ 16180232 (+) |
| G296562 | NA | other | downstream | 1008863 | 16314263 ~ 16315126 (+) |
| G296825 | NA | other | downstream | 1291750 | 16597150 ~ 16597787 (+) |
| LOC113531918 | LOC108257642 | other | downstream | 1296304 | 16601704 ~ 16618438 (+) |
| afdna | afdn | other | downstream | 1374696 | 16680096 ~ 16807291 (+) |
