G167152


Basic Information

Item Value
gene id G167152
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 17536419 ~ 17536775 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU197897
ctgggtcactggggtttattgataacgtgactgttgatagaagtagcaggatgaattctgaagtgtacagagctatactttctgctcagattcagtcaaatgctgcaaaactgataggacagcgcttcacagtacagatggataacaacccaaaacatactgtgaaagcagcccaagagcttggaaattaaatgttcttaaatggccgagtcagtcacctgacctcaacccaactgagctgcttttcacttactgaaggcaaatctgaaggcagaatgacccacaaacaagcagcaactgaagatggctgcagtaaagacctggcaaatcacctcaagggaggaaactcagcatttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197897 True 357 lncRNA 0.44 1 17536419 17536775

Neighbor

gene id symbol gene type direction distance location
impg1b LOC108270397 coding downstream 380777 17135478 ~ 17155642 (-)
slc30a1b LOC108269644,LOC105895753 coding downstream 583122 16940627 ~ 16953297 (-)
hadhab hadha,LOC100304971,LOC103035446,LOC108425650,LOC102203549,LOC107594700,LOC102787580,LOC107752738 coding downstream 598980 16928845 ~ 16937439 (-)
tmem62 tmem62,LOC103132791 coding downstream 614372 16907722 ~ 16922047 (-)
mta1 mta1,LOC107679789,LOC107666257 coding downstream 725203 16776703 ~ 16811216 (-)
iah1 iah1 coding upstream 158005 17694780 ~ 17699650 (-)
asap2a asap2 coding upstream 171843 17708618 ~ 17781052 (-)
id2a id2,id2a,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC106566577 coding upstream 387946 17924721 ~ 17927050 (-)
sh3yl1 sh3yl1,LOC107733179,LOC107674108,LOC107594817 coding upstream 655184 18191959 ~ 18230475 (-)
alkal2b LOC108425626 coding upstream 706585 18243360 ~ 18249232 (-)
LOC117598352 NA non-coding downstream 69645 17452366 ~ 17466774 (-)
G167124 NA non-coding downstream 174263 17361953 ~ 17362156 (-)
G167091 NA non-coding downstream 398952 17137136 ~ 17137467 (-)
G167079 myo6b,LOC108269576,LOC107666253 non-coding downstream 410831 17124505 ~ 17125588 (-)
LOC117598293 NA non-coding downstream 447643 17076982 ~ 17088776 (-)
G167250 NA non-coding upstream 132875 17669650 ~ 17672773 (-)
G167572 NA non-coding upstream 734828 18271603 ~ 18271816 (-)
G167577 NA non-coding upstream 758208 18294983 ~ 18296555 (-)
G167579 NA non-coding upstream 765330 18302105 ~ 18303339 (-)
G167580 NA non-coding upstream 779703 18316478 ~ 18316699 (-)
htr1b htr1e,LOC108269541 other downstream 288596 17166868 ~ 17247823 (-)
mideasb elmsan1 other downstream 637689 16873279 ~ 16898730 (-)
eml5 eml5,LOC108435760 other downstream 1773701 15715560 ~ 15762718 (-)
ktn1 ktn1,LOC107668535 other downstream 1872924 15633002 ~ 15663495 (-)
pgfb pgf,LOC108435746 other downstream 2214368 15303235 ~ 15322051 (-)
cmpk2 cmpk2 other upstream 78963 17615738 ~ 17624534 (-)
G167566 apob other upstream 768968 18305743 ~ 18316207 (-)
gdf7 LOC108270114 other upstream 838628 18375403 ~ 18382455 (-)
bahd1 bahd1,LOC108436768 other upstream 1063520 18600295 ~ 18642889 (-)
LOC113538624 LOC107572756,LOC107690120,LOC107579140,LOC107722728,LOC107690130 other upstream 1302840 18839615 ~ 18847696 (-)

Expression


Co-expression Network