trnal-aag_9


Basic Information

Item Value
gene id trnal-aag_9
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 20412849 ~ 20412930 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnal-aag_9
GGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGgcgtgggttcgaatcccaccgcTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-aag_9 True 82 tRNA 0.65 1 20412849 20412930

Neighbor

gene id symbol gene type direction distance location
bod1l1 bod1l1,LOC107705061 coding downstream 721 20400480 ~ 20412128 (-)
LOC117598840 bod1l1 coding downstream 12374 20394684 ~ 20400475 (-)
nkx3-2 nkx3-2 coding downstream 26224 20383757 ~ 20386625 (-)
rab28 rab28,LOC102780097,LOC106600633,LOC107712918 coding downstream 38273 20342473 ~ 20374576 (-)
LOC113527919 clnk coding downstream 217336 20177265 ~ 20195513 (-)
aurkb aurkb,plk4,LOC108431899,LOC107704466,LOC107712916,LOC107705065,LOC105908766 coding upstream 1170 20414100 ~ 20418381 (-)
tmem107 tmem107,LOC108274527 coding upstream 6828 20419758 ~ 20424672 (-)
LOC113528321 fbxl12 coding upstream 13829 20426759 ~ 20430515 (-)
LOC113528637 fat4,LOC107717300,LOC107694441 coding upstream 194694 20607624 ~ 20697160 (-)
spata5 spata5 coding upstream 491594 20904524 ~ 21003477 (-)
G214159 NA non-coding downstream 356705 20020552 ~ 20056144 (-)
G213879 NA non-coding downstream 749087 19663337 ~ 19663762 (-)
G213716 tnrc6a non-coding downstream 990434 19417184 ~ 19422415 (-)
G213549 NA non-coding downstream 1339864 19023758 ~ 19072985 (-)
G213407 NA non-coding downstream 1563702 18792435 ~ 18849147 (-)
G214325 NA non-coding upstream 23122 20436052 ~ 20438834 (-)
G214331 NA non-coding upstream 32593 20445523 ~ 20445748 (-)
G214493 NA non-coding upstream 365835 20778765 ~ 20781702 (-)
G214526 NA non-coding upstream 428501 20841431 ~ 20841634 (-)
G214626 NA non-coding upstream 490168 20903098 ~ 20903837 (-)
hs3st1 hs3st1 other downstream 199220 20205339 ~ 20213629 (-)
slc2a9l2 slc2a9 other downstream 274636 20039787 ~ 20138213 (-)
lyar lyar other downstream 428700 19940354 ~ 19984149 (-)
rbbp6 rbbp6 other downstream 964290 19429217 ~ 19448559 (-)
si:dkey-204f11.64 LOC108274053 other downstream 1585115 18823471 ~ 18827734 (-)
spry1 spry1 other upstream 487127 20900057 ~ 20905271 (-)
fgf2 fgf2,LOC107717315 other upstream 601509 21014439 ~ 21028081 (-)
slc16a2 LOC108279893,LOC107596364 other upstream 823872 21236802 ~ 21272507 (-)
LOC113528016 thegl other upstream 939351 21352281 ~ 21359190 (-)
G215187 NA other upstream 1263341 21676271 ~ 22269092 (-)

Expression


Co-expression Network