trnag-ucc_23


Basic Information

Item Value
gene id trnag-ucc_23
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 1972909 ~ 1972980 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnag-ucc_23
GCGTTGGTGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTtgacccgggttcgattcccggccaacGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc_23 True 72 tRNA 0.58 1 1972909 1972980

Neighbor

gene id symbol gene type direction distance location
aasdhppt aasdhppt coding upstream 47651 1908133 ~ 1925258 (+)
LOC113544532 dync2h1,LOC108413322,LOC107566891 coding upstream 183891 1727465 ~ 1789018 (+)
LOC113544631 NA coding upstream 293028 1668998 ~ 1679881 (+)
LOC113544533 NA coding upstream 319923 1636220 ~ 1652986 (+)
LOC113544536 LOC108277717 coding upstream 427648 1542618 ~ 1545261 (+)
lamtor1 lamtor1,LOC106581407 coding downstream 2132 1975112 ~ 1980946 (+)
numa1 NA coding downstream 12060 1985040 ~ 2003758 (+)
nlrc3l NA coding downstream 32639 2005619 ~ 2011017 (+)
chordc1a chordc1,LOC108277957,LOC108412466 coding downstream 41299 2014279 ~ 2021155 (+)
grm5b grm5,LOC108277953 coding downstream 97109 2070089 ~ 2119213 (+)
LOC117599082 NA non-coding upstream 126028 1845761 ~ 1846881 (+)
G218450 NA non-coding upstream 143094 1798693 ~ 1829815 (+)
G218439 NA non-coding upstream 290791 1680220 ~ 1682118 (+)
G218427 NA non-coding upstream 390116 1581397 ~ 1582793 (+)
G218383 NA non-coding upstream 404769 1567457 ~ 1568140 (+)
G218534 NA non-coding downstream 226366 2199346 ~ 2199988 (+)
G218574 NA non-coding downstream 328221 2301201 ~ 2306753 (+)
G218573 NA non-coding downstream 334187 2307167 ~ 2360138 (+)
G218576 NA non-coding downstream 337838 2310818 ~ 2312249 (+)
G219018 NA non-coding downstream 640200 2613180 ~ 2613470 (+)
G218476 NA other upstream 48625 1921771 ~ 1924284 (+)
gria4a gria4a,LOC108278238,LOC107756206,LOC107566895,LOC107689577,LOC107560842,LOC107725765,LOC102308165,LOC107670112 other upstream 65666 1843357 ~ 1907243 (+)
fgf12b fgf12,fgf12b,LOC108278337,LOC108411839,LOC107689585,LOC107549734 other upstream 301568 1526298 ~ 1671341 (+)
LOC113544658 NA other upstream 479878 1490294 ~ 1493031 (+)
nyap2a nyap2 other upstream 798162 1133034 ~ 1174747 (+)
LOC113544529 nox4 other downstream 64751 2037731 ~ 2052595 (+)
ctsc ctsc,LOC107735775 other downstream 153807 2126787 ~ 2132380 (+)
tiam1b LOC108278361,LOC108411134,LOC107585744,LOC107705640,LOC107558809,LOC107670130 other downstream 175011 2147991 ~ 2196665 (+)
ccdc150 LOC108277901 other downstream 348010 2320990 ~ 2332581 (+)
LOC113544485 NA other downstream 958350 2931330 ~ 2939252 (+)

Expression


Co-expression Network