fkbp10a (LOC108257211)


Basic Information

Item Value
gene id fkbp10a
gene name LOC108257211
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047617.1
NCBI id CM018563.1
chromosome length 20335669
location 55108 ~ 88515 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026918350.2
GGAGGTTTTTCCAGCTGTTCCCGAGTCCTGAGTTACAGCTGTGATTATCTGTTTCCTTTCATTCCGTCTAGCTGGGTTCGTGGGGCAGATGTGCTGCTTCTCTGAGATCCTACAGAAACTGTTTCATTGCTGCTGTGTCACTGCAGACTGGAGATACatctgaactctctctctctctctctctttctctctctctctgcaagtGCACCACTGCAACACGTCTACAAAAAGAGGCGGAACCGAGACAGTCAAGTTTACAGAGTTTGTTCgggatttttcttttgtttgggCAAATCAGTGACAGTTCTGGTATCGTTTAgggaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagacagagagagaaatggatgtAAAGGTGGCGCTGTATGTGCTCTGTGtgtactgcgcatgcgcgaTGTGTAACACGGGTCCCAGTGGGGAGTTGATTATTGATCGATATTCATTACCGACCCGCTGTGGCAGAGAGGTTCAGGTCGGTGATTATGTACGGTACCATTACACCGGATCGTTTCCGGACGGGAGGATCTTCGACTCCAGTGAGAGTAAGGGCATGGCATTTGTTGGACTGGTGGGTGTGGACAGTAAGGTGATTCCAGGCTTGGACAGAGGAGTGATGGggatgtgtgtgaatgagaggaGGAAGATCATCATCCCCCCTCACCTTGGATATGGCATCTCTGGAGCTGGTACAGTGATTCCTTCGGATGCGACTCTGGTGTTTGACGTCATGTTGTTGGACGTGTGGAATAAAGACGATAGTGTGGACACTCGTCTGCTCTTTAAGCCATTGTCCTGTCGCCGCTCAGTGCAGCATGGTGATTTTGTGCGATATCTGTATAACGGCTCACTTATTAACGGCACAAACTTCGAGTCCAGGTATGGACAAAATGTCACATATGACACATATGTGGATGAAGATCACCTGATCGGCGGCATGGTGAAGGGGCTAATGGGaatgtgtgtgggagagaaacGCTCCATCATCATCCCACCATTTTTAGCCTACGGGGAGAAAGGATatggtgtgaaGGTGCCGGCTCATGCGACGGTGGTGTTTGATGTGCTGCTCATTGATGTATTTAATGTGAAGGATGATGTTCAGGTGGAGGTCCTCCATGTTCCTCAGCCCTGCAGAAGAAAATCAAAGAAGGGAGACTTCATACGTTATCACTACAATGGAACATTCCAGGACGGAACACTGTTCGACTCCAGCTACCAGCGCAAAAGTACGTACAATACGTTTGTGGGTGTGGGTCATGTGATCCCTGGAGTGGATAAAGCCTTgctaggagtgtgtgtgggagagaagaGACACATCATCGTTCCTCCACACCTCGCCTATGGAGAGAATGGAACAgGTGACCTTATTCCCGGTTCTGCCGTGTTGATCTTTGACATCCACATCATTGACTTCCACAATCCAAAAGACTCAGTGGATATTCAGATTACCCACAAACCCCTGCAGTGTAACAACACCAGCGCCACTAATGACCTTGTCATCTACCACTATaactgctctctgctggacggAACCCGACTTTACTCATCTACTGACTTGGGCAGACCTGCACAGGCAACACTGGGTCAAGCAGAGGTCATCAAGGGGCTGGATCAAGGGTTAAAGGACATGTGTGTGGGGGAGAAGAGGGAGGTGATTGTGCCTCCCCACTTCGGACATGGACAAAATGAAGgttcTGTGGTTCCAGCAGATGCCGTGTTAATTTTTGAACTGGAGTTGTTGGATTTGCGAAAAGGCGTTCCTCAGGGTTTCCTGTTTATCTGGCTGGAGGAGATTCCTGATCCTTTGTTCAGCTCCATGGACCTTAACCAGGATGGAGAAGTTCCACTGGAGGAGTTCACAGCATTCATCAGGCTGCAGGTGTCAATGAGCAAAGGTCGTCTCCACCCTGCAATGGAAGCTGATGTAATCATCAGAGAGATGTTCACCAGCCAGGATCAGAACGCTGATGGGAGAATCACAGAAGATGAGCTGAAACTTCAGACGGACAAGACGACAGGACATGATGAGCTCTGAGAAAGAAACATGCGTGATGTCATCAGTGAAAGCCTGTGTGATGCCATCagtgacctgcacaggtgaATTAGGAAGTGCTGGGGAACTCTTCACCTGTTCATCAGGAGCATCAGGATAAAGAGCCCTGactatcaaaacacacacacattgtcctgttctgttcagaataaatgtacataaatatgacTGTATAAACCACTCATCTTAGTACAAACAGTTGtttgatgtgtatgtgtatgtgtgtgtgtgtgcgtgtgagagagagcaagagagtcGGAGTGGCTCATCATCAAACCACATTGCATTATGGGAACAATCTTCCTTTTTTCTGAaaacatattgtggttacatcaaactgccagacagtggtgctggacttaatacaGGTCCTCTCTTGAGGCAATGGCatgcaagaaaaatgtgattaagTTCAAGGCCAGAAATATACGAAGTCATAATTCTACccttattacatattacatacataatgttacatttaaccCTGGGCTAATTTATAATTTTCACTATCCATATTTCCCATACAAACACTCAAACCTGAAAATATTTACCATATTGCTTAGCTAATGACATGATTCTCGAGCTGCAATTGATCAGTTTCATGACAAAAATGTGTAGATTGAGTGGGAATTCTTTGATTTGTGACTGTGTAAACAAAGAAACTTTTCAGAAATGTGAAGCCTAACTGCACCTTAATTTGTACTGTAGTGAATGGGCCGTTTATTTGCCCTAGTGGCAAACAAACACTCATAACTCAAAAAGTATACTTCAAATCAATTAGATATTTAGTTTGAATAGATTAAAGGTAAAAGTATAAGGATTTTAGATGAAAATGTCCTGTTGAAACAGTGAATTCAGATGAAACACTAAAACCTagtgtggtgatgatgatatcACCCactctagcttttccccaaattAATGAATGGGGGAAGAAAGAAGGGTGGATGGAAAGTGAAGAATGAGTGCAATCTGTCTATTTGGTACAGCGAGTCCTGGTGTACCCAGGTATGACCATGTGAAGTTTGGTGGTTTAGCTTGAGAACTGAATGAATTagagcagattaaaaaaaaaaaaaattccatttaagTGAATAGGGGAAAATGAAGTGTAGCAGGAGAAAGGATGGATATTTGAAATAACTATATCCAAAAAGCTCAGGGTCAGACCAGACATGTTAGAGTTGGTTTGGTCTCGATATCTCAAAAACTGTAGGAGCAGATGTGTGCAGGAAATCaggtgaaataataataataataataataataataaattattacaattagGGTAATAATAAATGGTAATAATAAATGGTCTTGGATTGGAACTCCTGGTTGCTGTCATGTGTGTAATTACAAACATAAGTCTTAACAGAGAGAGTTGAAACCTGTAAAAAGAATAAAcctgtgaaagtgtgtgtgtgtctgttttgctACTCttattgaaaacatttttaaaatatttgcatgtaaatgtttattattgtcATGTCTTTATTACACTGCTTGTTTTTatagtaggtgtgtgtgtgtgtgtgtctaaatgaTCAAATTAAAGTTTGGAACAGAGGTGATGTAAT

Function

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP10 isoform X1

GO: NA

KEGG:

id description
K09575 FKBP9_10; FK506-binding protein 9/10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026918350.2 True 3673 mRNA 0.43 10 55108 88515

Neighbor

gene id symbol gene type direction distance location
LOC113529063 LOC108256844,LOC108256868,LOC108256846,LOC108262172 coding downstream 91301 179816 ~ 180757 (+)
LOC113529056 LOC108262172 coding downstream 103438 191953 ~ 192894 (+)
LOC113529062 LOC108256868,LOC108256847,LOC108256843,LOC108256846,LOC108262172 coding downstream 116209 204724 ~ 205665 (+)
LOC113529061 LOC108256842,LOC108256840,LOC108256799,LOC108262172 coding downstream 137238 225753 ~ 226697 (+)
LOC113529060 LOC108262172 coding downstream 140546 229061 ~ 230002 (+)
G335887 LOC108257212 non-coding upstream 1291 50894 ~ 53817 (+)
G335882 NA non-coding upstream 24960 29943 ~ 30148 (+)
G335876 NA non-coding upstream 34100 14878 ~ 21008 (+)
G335896 NA non-coding downstream 36679 125194 ~ 142530 (+)
G335897 LOC107737118 non-coding downstream 38523 127038 ~ 144471 (+)
G336016 NA non-coding downstream 124631 213146 ~ 270883 (+)
G336041 NA non-coding downstream 265515 354030 ~ 404443 (+)
G336078 NA non-coding downstream 351924 440439 ~ 440785 (+)
G336034 NA other downstream 198334 286849 ~ 287215 (+)
G336161 LOC108257052 other downstream 650854 739369 ~ 749674 (+)
G336172 NA other downstream 705602 794117 ~ 794695 (+)
G336213 NA other downstream 885154 973669 ~ 976321 (+)
mllt11 mllt11 other downstream 1044440 1132955 ~ 1136124 (+)

Expression


Co-expression Network