G368406


Basic Information

Item Value
gene id G368406
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047619.1
NCBI id CM018565.1
chromosome length 19570078
location 19327355 ~ 19340970 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU436437
gtgagtgagAGCTCAGTAATatcggggtgtgtgtgagtgtgtgtgagtgagagctCAGTAATatcggggtgtgtgtgagtgtgtgtgtgagtgtgtgagtgtgtgtgtgagtgtgtgtgtgagtgtgtgagtgtgagtgtgtgagtgtgtatgtgatataTCGAGGCTGGTTCTGAGTTTTTCCTACGTGTTCTCCGGTGTCGGggttctgtctgtctctctgcgctccgtctgtctctccggcgctcctctctttctctctttctctctttttttctcttgttcagCCATCTTCCTTGTTTTCATCCACAaaactcctctttcctctccgcctttcctctttttttccttctgcttttcctcctcctctgcagGAAATCCAGCGCTCGTGACCTCCACACCGGATTCCTTTTcccacttttacacacacacacactctcacactctctcacacacacacacacacacacacacacacacacacacacacacactcacacacacacactctctcacacacacttctttttttaaggGAAATCTCACACTCTCATCCCAGAGCTgagaaatcagtgtgtgatggtcaCTCGCTCCtccttaatgtgtgtgtgtgtatctgtgtgtatctgtgtgtgtgtgtgtgtgtatctgtgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtatctggtgAGTTGGGATCGCGCAGTCTGACCGTCATGTGACGGAGAGGAGCGGAAATAGCGGCGCGCGCACTGGATCCAGGTTTATAGGATTATAactccacacactcatcatcatctctctcaaacacacacacacacacacacagcccagtTCGGGTGTTTATAAAATTGAGAGATTttgttcctttttattttaataataatataaataccAGTAAGCTGCTGTTGTTCCGGCCCGGACAGTAACCTGCACACTAAACTGAGTGTCTGTTAcaccacagtaacacacactagTGTGTACTTCACATGTCATCATGTCAATTAGTAACCTAACTGATTTACTGACTCTGAATCAGCATCGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU436437 True 1049 lncRNA 0.46 2 19327355 19340970

Neighbor

gene id symbol gene type direction distance location
LOC113524267 LOC108259537 coding downstream 6693 19316096 ~ 19320662 (-)
tmem178 tmem178a,LOC105026821,LOC107691291 coding downstream 38847 19281062 ~ 19288508 (-)
elfn2a elfn2,LOC105030764,LOC106564442,LOC106590757 coding downstream 121365 19135589 ~ 19205990 (-)
LOC113524274 LOC108259477 coding downstream 280728 18892981 ~ 19046627 (-)
si:ch211-246m6.4 LOC108259532,LOC108414346 coding downstream 481678 18840817 ~ 18845677 (-)
LOC113525355 LOC108259503 coding upstream 208975 19549945 ~ 19556707 (-)
LOC113525354 LOC108259500 coding upstream 216107 19557077 ~ 19566528 (-)
G368403 NA non-coding downstream 22558 19304050 ~ 19304797 (-)
G368388 slc8a1a,LOC108415960,LOC107737224 non-coding downstream 47507 19275825 ~ 19279848 (-)
G368391 LOC100709284 non-coding downstream 52165 19272195 ~ 19275190 (-)
G368390 NA non-coding downstream 61887 19262561 ~ 19265468 (-)
G368280 bzw1,LOC108414345,LOC107653537 non-coding downstream 490296 18832484 ~ 18837059 (-)
G368432 NA non-coding upstream 48006 19388976 ~ 19394961 (-)
G368439 NA non-coding upstream 63528 19404498 ~ 19404763 (-)
G368503 NA non-coding upstream 135295 19476265 ~ 19539669 (-)
G368517 NA non-coding upstream 166718 19507688 ~ 19508501 (-)
G368472 NA non-coding upstream 180583 19521553 ~ 19554477 (-)
LOC113524312 LOC108259540 other downstream 11897 19176362 ~ 19315458 (-)
mfng LOC108259517 other downstream 92169 19213078 ~ 19235186 (-)
si:ch211-246m6.5 NA other downstream 438284 18853708 ~ 18889071 (-)
s100b s100b,LOC108259544 other downstream 597894 18701902 ~ 18729461 (-)
ahr2 LOC108259484 other downstream 820663 18301081 ~ 18506692 (-)
G368523 NA other upstream 188917 19529887 ~ 19544880 (-)

Expression


Co-expression Network