trnai-aau_23


Basic Information

Item Value
gene id trnai-aau_23
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047622.1
NCBI id CM018568.1
chromosome length 15845479
location 11782390 ~ 11782463 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnai-aau_23
GGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-aau_23 True 74 tRNA 0.61 1 11782390 11782463

Neighbor

gene id symbol gene type direction distance location
LOC113544239 LOC108260675,LOC107549207 coding upstream 644 11764033 ~ 11781746 (+)
trnai-aau_22 NA coding upstream 1847 11780470 ~ 11780543 (+)
trnai-aau_21 NA coding upstream 2633 11779684 ~ 11779757 (+)
clrn2 clrn2,LOC107746045,LOC107754181,LOC107702302,LOC107551567 coding upstream 22087 11756285 ~ 11760303 (+)
clockb LOC108260793 coding upstream 54778 11705579 ~ 11727612 (+)
trnai-aau_24 NA coding downstream 227 11782690 ~ 11782763 (+)
trnai-aau_25 NA coding downstream 1346 11783809 ~ 11783882 (+)
trnai-aau_26 NA coding downstream 1953 11784416 ~ 11784489 (+)
si:dkey-245p14.4 LOC108260671,LOC108434314 coding downstream 3691 11786154 ~ 11790153 (+)
smc2 smc2,LOC107656012,LOC107702366 coding downstream 10107 11792570 ~ 11804263 (+)
G395934 LOC108260675,LOC107549207 non-coding upstream 723 11768905 ~ 11781667 (+)
G395863 rbm47 non-coding upstream 122041 11656590 ~ 11660349 (+)
G395838 NA non-coding upstream 338524 11443645 ~ 11443866 (+)
G395818 NA non-coding upstream 369869 11411132 ~ 11412521 (+)
G395568 NA non-coding upstream 562325 11219854 ~ 11220065 (+)
G395955 NA non-coding downstream 42448 11824911 ~ 11876241 (+)
G396314 NA non-coding downstream 594746 12377209 ~ 12379424 (+)
G396338 NA non-coding downstream 624016 12406479 ~ 12497688 (+)
LOC113544390 NA non-coding downstream 680058 12462521 ~ 12463044 (+)
G396380 NA non-coding downstream 764323 12546786 ~ 12555029 (+)
ptpn9b LOC108260905,LOC108434348,LOC107656769 other upstream 229848 11528553 ~ 11552542 (+)
prom1b prom1,LOC108434342 other upstream 379116 11352186 ~ 11403274 (+)
smim18 smim18 other upstream 517220 11261498 ~ 11265170 (+)
smim14 smim14,LOC107700293,LOC107757606 other upstream 876976 10897933 ~ 10905414 (+)
G395365 NA other upstream 1120687 10660946 ~ 10661703 (+)
G396005 NA other downstream 314508 12096971 ~ 12102765 (+)
LOC113547319 NA other downstream 1372813 13155276 ~ 13160354 (+)
zcchc7 NA other downstream 1464474 13246937 ~ 13292141 (+)
klf3 klf12,LOC106536821,LOC108260714 other downstream 1655149 13437612 ~ 13456819 (+)
LOC113547324 NA other downstream 1750518 13532981 ~ 13546963 (+)

Expression


Co-expression Network