G411297


Basic Information

Item Value
gene id G411297
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047624.1
NCBI id CM018570.1
chromosome length 11744058
location 10764214 ~ 10764729 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU488185
TGGGATGAGGATTTAAATGCTGTCTGtagaacagaaagaaagcagagcATTACTCATGCCGACCTGCTGAAGCTGCAGGAGCCTGGTTTCAGATGGACCATCGCGGGTCAGAGGCTGCAGCTCAGCGCGCGCTGGGGCTCAACATCCGGCCGCGGGCTCGTGCGCCTGAGCCGGTGATCGCGCTGCACTCGGACCAAGCCCTTGTGCGCGTGCAACCGAACCTAACCCGAGTGCTGCATTCGGCTTTCTTCGGAATTCCTCGGAATTCAGCGTCCTTGCAGCCAAGAATATTAAGTTTCAGCGAATTTATTTCACTCTGGTTTCTTCACACGCGTCCCGTTTACCACGTGACCTACTGTGTTAACAGCGTCATTTTCCAAACATTGTCTTT

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU488185 True 391 TUCP 0.54 2 10764214 10764729

Neighbor

gene id symbol gene type direction distance location
mia3 mia3 coding upstream 13247 10726452 ~ 10750967 (+)
ccnk ccnk,LOC107560198,LOC107555300,LOC107678663,LOC107679687 coding upstream 116334 10634301 ~ 10647880 (+)
cad cad coding upstream 132860 10603450 ~ 10631354 (+)
stxbp5a stxbp5a,stxbp5,LOC107696120,LOC107710208,LOC107679494,LOC107726399,LOC108436475 coding upstream 212454 10477436 ~ 10551760 (+)
adgb LOC108279018 coding upstream 298146 10426805 ~ 10466068 (+)
brox brox,LOC107710643,LOC107732498,LOC107704042,LOC107568230 coding downstream 1878 10766607 ~ 10773928 (+)
taf1a NA coding downstream 12983 10777712 ~ 10787597 (+)
dusp10 dusp10 coding downstream 27338 10792067 ~ 10811069 (+)
slc30a2 slc30a3,slc30a2 coding downstream 83498 10848227 ~ 10867766 (+)
LOC117596571 NA coding downstream 152375 10917104 ~ 10928916 (+)
G411282 NA non-coding upstream 54557 10708174 ~ 10709657 (+)
G411029 NA non-coding upstream 196636 10563583 ~ 10567578 (+)
G411024 snw1,LOC107681047,LOC107662182 non-coding upstream 207197 10554029 ~ 10557017 (+)
G410937 NA non-coding upstream 403737 10292057 ~ 10360477 (+)
G410929 NA non-coding upstream 515893 10165578 ~ 10248321 (+)
LOC117596550 NA non-coding downstream 75913 10840642 ~ 10842387 (+)
G411304 LOC108259151 non-coding downstream 129364 10894093 ~ 10896035 (+)
LOC113529302 NA non-coding downstream 300965 11065694 ~ 11068855 (+)
G411395 NA non-coding downstream 305242 11069971 ~ 11074310 (+)
G411398 NA non-coding downstream 312996 11077725 ~ 11086823 (+)
armc2 armc2 other upstream 469009 10235981 ~ 10295205 (+)
afg1lb lace1 other upstream 533407 10197716 ~ 10230807 (+)
G410936 snx3 other upstream 581542 10178049 ~ 10182672 (+)
LOC113529148 NA other upstream 1659990 9098377 ~ 9104224 (+)
G409600 NA other upstream 2885669 7877795 ~ 7878545 (+)
aig1 aig1,LOC107675100,LOC107689442,LOC106607822 other downstream 350844 11115573 ~ 11153005 (+)
txlnba txlnb other downstream 625771 11390500 ~ 11418204 (+)

Expression


Co-expression Network