AMCG00000081


Basic Information

Item Value
gene id AMCG00000081
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 3464363 ~ 3469964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000081
ATGGGGAGTGAGGACACAGAAATCGTCGGCAGTGCCCACCTCTCATCTGACAGCGCCGAGCAGGAGAGCCATCTGATGCAGGGCTGGAGAGAGGGCTACAGTACACTGCTCTCAATGCACCACAGGAGAGGCCAGCAGCACAGGGGTCCCCAGGGGTCCAGGGCTCCCAGCAGCTCCCAGGCTGCAGTCCACATGGCACAGggtaggactggcaggaagtGCAGGGCAGAAGAGCAGGGGTACCTATGCTCTGACTACGCCCAGCAGCAGAGCCCACATTGTGGCCCTGCAGAGCTCCCGGCCGCCAGCCAAGATGAGAGCGGGCTCAGCAAGGCCGGCTCCTCGGTCAGCAGTGTGGGGCTGGTTATCAATAATAGTGCTTACATGGACCTCAATCAGAGAGAGGGTGGGCAATGTGCCGCGcGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000081 True 429 mRNA 0.62 2 3464363 3469964

Neighbor

gene id symbol gene type direction distance location
AMCG00000079 NA coding upstream 57 3443513 ~ 3464306 (+)
AMCG00000078 NA coding upstream 47806 3403359 ~ 3416557 (+)
AMCG00000075 NA coding upstream 356488 3076185 ~ 3107875 (+)
AMCG00000085 nkx2.1,nkx2-1,LOC107679765,LOC107666245,LOC107582966,LOC107578306 coding upstream 604179 2858153 ~ 2860184 (+)
AMCG00000088 NA coding upstream 623328 2839915 ~ 2841035 (+)
AMCG00000082 adssl1,pura1 coding downstream 53636 3523600 ~ 3536734 (+)
AMCG00000083 NA coding downstream 68724 3538688 ~ 3541156 (+)
AMCG00000090 NA coding downstream 177842 3647806 ~ 3680717 (+)
AMCG00000089 NA coding downstream 244700 3714664 ~ 3720675 (+)
AMCG00000102 pp14b,ppp1r14d,LOC105916596,LOC101077163,LOC105908342 coding downstream 436458 3906422 ~ 3915953 (+)
G147856 NA non-coding upstream 168495 3216784 ~ 3295868 (+)
G147842 NA non-coding upstream 325174 3135920 ~ 3139189 (+)
G147814 NA non-coding upstream 428017 3035019 ~ 3036346 (+)
G147809 NA non-coding upstream 438574 3025378 ~ 3025789 (+)
G147808 NA non-coding upstream 441095 3022938 ~ 3023268 (+)
G147994 NA non-coding downstream 160618 3630582 ~ 3631455 (+)
G148010 NA non-coding downstream 217999 3687963 ~ 3688231 (+)
G148036 NA non-coding downstream 258361 3728325 ~ 3759003 (+)
G148075 NA non-coding downstream 406407 3876371 ~ 3879521 (+)
G148119 NA non-coding downstream 541690 4011654 ~ 4013403 (+)
G147726 LOC104962440 other upstream 1060391 2403730 ~ 2403972 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 1405593 2036023 ~ 2058770 (+)
G147416 NA other upstream 2347413 1063085 ~ 1116950 (+)
G147311 NA other upstream 2965852 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 3209922 231336 ~ 254441 (+)
AMCG00000094 NA other downstream 220808 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 251021 3720985 ~ 3724316 (+)
G148040 NA other downstream 290215 3760179 ~ 3760624 (+)
AMCG00000113 NA other downstream 642156 4112120 ~ 4193033 (+)
AMCG00000136 btbd7 other downstream 1618475 5088439 ~ 5161195 (+)

Expression


Co-expression Network