AMCG00000756 (LOC107709571)


Basic Information

Item Value
gene id AMCG00000756
gene name LOC107709571
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 2098930 ~ 2120759 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000756
AGGTGTGGCGGGGCCGAGACGAGCGCCAGAACCTGGTGCAGCGCTTCGACGCCCAGCTGGTGATGGAGGAGAAGCGGGgtgaggtggaggaggaggtgcGCATGCAGGTGGACGAGCTGATGAGGCAGGAACTGAAGAACTTAAAGTTAGCTGTGGACCGGGAGaaagggaagaagaagaaaaaagggaagaaaggGAAGAAGaagaagaaaaaaggcaagCGGAGTggcaagaagaagaaaaagaaggacaGGGACCTGACGGCAGACAGGTCCATTGAGTCGCTCTTCGAGGAGCTGGTGCACGAGGGGCTACTGATCAGACCGATGGACGTCAGACTCTCAGACTATATAGGCGAGTACAGTTACCTGGGCACCACGCTGAGGCAGGCGGACATCGAGCCCATGCCGTCTCTGTCCGACGTGAGACAGCTGATCGCCCTGTACGGAGTCCTGCCACTGGGCTCCCAGGCGGTTCACGAGAGGGCCCCGCTGTTGAAGGCCCTGTTGCTGGCTGGCCCGGCTGGAGTGGGGAAGAAGATGTTGGTCCACGCCCTCTGCACGGAGACCGGAGCCAACCTGTTCAACCTCTCCCCAGGCAACCTGGCCGGGAAGTTCCCCGGCAAGAGTGGCCTGCAGATGATGCTTCACATGGTGTTCAAGGTAGCTCGTCAGCTGCAGCCCTCGGTCGTCTGGATCGGAGACGCCGAAAAGACCTTCTACAAGAAAGTACCGAAGGCAGAGAAAGAGATGGAACCGAAGCGGCTGAAGAAGGACCTCCCAAAGATCCTGAAGTCCATCCGGCCTGAGGACCGCGTCCTGGTGGTGGGGACATCGCGGCGGCCCTTCGACGCCGACCTCAAGCCCTTCTGTAAAGTGTTCAGGAAAATCCTGCTCATCCCCCGGCCCGACTACGCCTCCAGACTGGTGTTGTGGCGGCACCTGGTGCGGGAGCGGGGGGGGCAGCTGACGGGCGCAATGGACCCGAGCTGCCTGGCCAAGGTGACGGACGGCTTCACGCAGGGCCACATCCTGCAGGCAGTGCGAGCCGTGCTGAGCGAGCGGAGGGTCCAGCAGCTGAGCAGGAAGCCGCTGAGCGCCCAGGAGTTCATCGCCCCGCTGGCCCGGCTGGACCCCGTCtacaaggaggaggaggagacctTCAAGGGATGGTACGCCAAAACACCGCTGGGGAAGAAGAGAGCCAAGGCAGCGAAGGCCAGCGAGGAGGAGGGCGAGgcggggaaggggaaggggaaagggaagggaaaaaaggggaagaagaagaag

Function

NR:

description
PREDICTED: IQ and AAA domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000756 True 1289 mRNA 0.61 10 2098930 2120759

Neighbor

gene id symbol gene type direction distance location
AMCG00000757 NA coding downstream 6962 2091703 ~ 2091968 (-)
AMCG00000754 NA coding downstream 8483 2081376 ~ 2090447 (-)
AMCG00000751 NA coding downstream 26535 2069175 ~ 2072395 (-)
AMCG00000739 NA coding downstream 229722 1866422 ~ 1869208 (-)
AMCG00000740 NA coding downstream 235306 1846309 ~ 1863624 (-)
AMCG00000755 NA coding upstream 12723 2133482 ~ 2144637 (-)
AMCG00000759 NA coding upstream 141909 2262668 ~ 2326605 (-)
AMCG00000763 NA coding upstream 273330 2394089 ~ 2399355 (-)
AMCG00000765 NA coding upstream 399476 2520235 ~ 2537868 (-)
AMCG00000770 NA coding upstream 932122 3052881 ~ 3055879 (-)
G125875 NA non-coding downstream 271188 1822252 ~ 1827742 (-)
G125845 NA non-coding downstream 521584 1575361 ~ 1577346 (-)
G125719 NA non-coding downstream 770282 1323503 ~ 1328648 (-)
G125712 NA non-coding downstream 779117 1319534 ~ 1319813 (-)
G125685 NA non-coding downstream 791577 1269231 ~ 1307353 (-)
G126005 NA non-coding upstream 307182 2427941 ~ 2520220 (-)
G126020 NA non-coding upstream 339956 2460715 ~ 2462488 (-)
G126037 NA non-coding upstream 437232 2557991 ~ 2558249 (-)
G126275 NA non-coding upstream 1430081 3550840 ~ 3552977 (-)
G126296 NA non-coding upstream 1553522 3674281 ~ 3676927 (-)
AMCG00000741 gtf3c3,LOC104966512 other downstream 267620 1829544 ~ 1831310 (-)
AMCG00000731 NA other downstream 327905 1762029 ~ 1771025 (-)
AMCG00000719 NA other downstream 598269 1478740 ~ 1500661 (-)
G125814 NA other downstream 676520 1386843 ~ 1422410 (-)
AMCG00000710 myo1b other downstream 786522 1307821 ~ 1312408 (-)
G126017 NA other upstream 331109 2451868 ~ 2457883 (-)
G126089 NA other upstream 916172 3036931 ~ 3041964 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other upstream 923408 3044167 ~ 3050016 (-)
G126096 NA other upstream 1010955 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other upstream 1013117 3133876 ~ 3140489 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000024_00479343_00529567 IQCA1 coding CI01000024 null 479296 ~ 529567 (-)