AMCG00000763


Basic Information

Item Value
gene id AMCG00000763
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 2394089 ~ 2399355 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000763
CAGAGTGAGGACTTCGACCAGTCTAAGGACACGTGCAGGAAACACAGTGAGCTGCAAACTCCTGGTCTTTCTACACCTGCAAGCTGGACTTTGGCTGCTGCTCAACCTTACTGCCTTGTAAAAGAAAGAGGGACCTCGGTGTGTTAGTCTCCAATTTCAGCTACGTTTTACTGATAAGGTGGCTTGCTGTTCCCTGTTTCTCGCCCCCTGGGAGAAGAATTAGAGAAAACACCGCTCACATTAGCCTGCTTGTGTCAATCTATAGatattgcttgttttttttaatccgtGGAAGATCTTCTCTGCTTCGCTCAGCCCTGAGCCATGACAGAGAGGAAACTCAGCGTCAGGAGCAAGGCGTCCAGTGTGAGCTCCGTCGGGGGTCCGGCGGTGGAGAAGAGGACCCTCAGGGTGAAGATGGTGCTGCTGGGGAGCAGCGGCGTGGGGAAGTCCAGCCTGGCCATCCGTTTCACCAAGGATGAGTTCAGGTGCACGGTTCCGACAGTAGGAAGTGCGTACCTGACTCACCTGGTGTGTTTGTACGACACCACCCTGAGGTTCGAGATCTGGGACACGGCCGGGCAGGAGAAGTACCACAGCGTTACCCCTCTGTACTATCGAGGGGCACAAGCAGCTCTTGTGGTGTACGACATCACCAAACGGGAGAGTTTTGCCCGGGCCCAGCTGTGGCTCAAGGAGCTGGAGAGGCAGTACTTCCTCGGGGAGACGGCCGTGGCTCTGGTGGGGAACAAAGGAGACCTGGATGACCTCCGGGAGGTGGCTCTGCAGGAGGGTCAGACGCTGGCTGAGAACAAAGGCTTGCTGTTCATGGAAACATCCGCAAAGTCAGGAAACAAAGTGAGCGAGCTCCTCCTGGCCATAGCACACAAGGTGCGGCAGAGCACAGGAGACGAGGGGATGCTCACTGAGTGGAGGGACTCTTGTGTGGATCTGCACGCCCCACAGACGCAGCACCGGCCAACGCCCTGCTGTGTGGCTCTATGAGCGCGGGGCGGCTGCCGGCGAGACACGGCCCTCTCCCGAGCGCAGCACAGCGGACGGGAATCCCCTTGGAGGAGAGTCAGAGCTCCCCGCCCCCGTAGGCCGGGCCACCAGAGACCTACAGCCAAAGTATAGACATACAGCCTCCCTTCCCTTGCCGGCCGGGACTGGCCACCTTTGCGGCTGGTGACAGGGCGCGAGGCCAGGTGCTGGATCGGTGTGAACCACTTCACACCTCCTGACGGGACGCTGGGGGCTGCGGACGCCGGGGGCTGTGTCACCCTCTCTCAGCACGGGGGctgctgtgtcagtgtggtgcaTACAGTTCACAGGATTTGTATTTCCGGACTGTAATGACCTGTCaaacacttgttttaaaatataattaaatacatacacg

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0015031 protein transport biological_process
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07909 RAB17; Ras-related protein Rab-17

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000763 True 1402 mRNA 0.58 6 2394089 2399355

Neighbor

gene id symbol gene type direction distance location
AMCG00000759 NA coding downstream 67484 2262668 ~ 2326605 (-)
AMCG00000755 NA coding downstream 249452 2133482 ~ 2144637 (-)
AMCG00000756 LOC107709571 coding downstream 273330 2098930 ~ 2120759 (-)
AMCG00000757 NA coding downstream 302121 2091703 ~ 2091968 (-)
AMCG00000754 NA coding downstream 303642 2081376 ~ 2090447 (-)
AMCG00000765 NA coding upstream 120880 2520235 ~ 2537868 (-)
AMCG00000770 NA coding upstream 653526 3052881 ~ 3055879 (-)
AMCG00000775 NA coding upstream 666455 3065810 ~ 3078543 (-)
AMCG00000776 NA coding upstream 684100 3083455 ~ 3103231 (-)
AMCG00000778 hspe1,LOC107690609 coding upstream 722853 3122208 ~ 3123800 (-)
G125875 NA non-coding downstream 566347 1822252 ~ 1827742 (-)
G125845 NA non-coding downstream 816743 1575361 ~ 1577346 (-)
G125719 NA non-coding downstream 1065441 1323503 ~ 1328648 (-)
G125712 NA non-coding downstream 1074276 1319534 ~ 1319813 (-)
G125685 NA non-coding downstream 1086736 1269231 ~ 1307353 (-)
G126005 NA non-coding upstream 28586 2427941 ~ 2520220 (-)
G126020 NA non-coding upstream 61360 2460715 ~ 2462488 (-)
G126037 NA non-coding upstream 158636 2557991 ~ 2558249 (-)
G126275 NA non-coding upstream 1151485 3550840 ~ 3552977 (-)
G126296 NA non-coding upstream 1274926 3674281 ~ 3676927 (-)
AMCG00000741 gtf3c3,LOC104966512 other downstream 562779 1829544 ~ 1831310 (-)
AMCG00000731 NA other downstream 623064 1762029 ~ 1771025 (-)
AMCG00000719 NA other downstream 893428 1478740 ~ 1500661 (-)
G125814 NA other downstream 971679 1386843 ~ 1422410 (-)
AMCG00000710 myo1b other downstream 1081681 1307821 ~ 1312408 (-)
G126017 NA other upstream 52513 2451868 ~ 2457883 (-)
G126089 NA other upstream 637576 3036931 ~ 3041964 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other upstream 644812 3044167 ~ 3050016 (-)
G126096 NA other upstream 732359 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other upstream 734521 3133876 ~ 3140489 (-)

Expression


Co-expression Network