AMCG00000765


Basic Information

Item Value
gene id AMCG00000765
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 2520235 ~ 2537868 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000765
CTGTTGGGCGACTGCTGCGGTTCGTGCGAGCCCGTGACCTCGAGATAACCCGAGCACTGTGTCGTTGCAGGTGTCCCAGACGAGCGGAAGCGATGAAGGTCCACATGCACACCCGAGTCTGTTTCCTGTGTGTGGTCACGTTCCTGTTCCACCAGTGCAGCCACTGCCATGGGGACggacaccaccaccaccaccatgccGAGGAGagcccgccccccccccacgaCCACAACGACTTCCAGATCTCCCAGGAGCCCTACCGGTCGGGCGGGGCGGGGGCCAGCGACCCGCCCCCCGAGCGCCGGGACGAGGCTGAGAGCGAGCAGAGGTTCTACATCCAGCAGCTGTTCCGGCGCTACGGCCGGCGCGACCGGCTGGACTTCGGAGGCTTCCAGAGCCTGCTGGACAGTCTGGGACTGGGGCAGGTGCATGTAGTGGAGCTGGACCATGAGGACCTGGGGCACGACCATGTGGCCCACCTGGACGCCCTGGAGGTCCAGAAAGGCCTTCATTCCCATTCCAACACACACCCTAGTTCCCAGCCCCACCCGCACCCGCACCCGCACCCGCAcccgcacccccacccccacacagaGGAGGATGAGGCTGCTGTGAGGGACGTTCACCCGGTCCAGTGCAACCGGACCCGGACGCCAGGGGTGCCCGCGAACTTGACCGCCGAGCTCGCCGCGGCCGGGCCCCCCCACAACGGCAGCCGCAACGAGTCGCAGCTGCACCGACACGCGGCGCACTCCCGGCACCACCAGCACAACCACCGGCACCCCCACCTACACCAGCACCACCACCGGCACAATGGCTCGGACAACCAGACGGACCACCTGGCCGAGCCCGGCGACGCCGCCCGCGAGGAGCAGCAGTTGTCTGTGCCACCCTCGGACCCCGGGGCCCGGAAGcccaggaagaagaagaaaagcgCGCGCAATAAAGATGCCACCCACCCGGCCCCGGTGCCGTCCCCCTCTACCGAGGATGGGGACCGCGGCGGCGAGGGTCCGGAGGACACGGGGGTCCACCTCCACGCGCACACGGCCGAGCCCGGGCATGGCCACAACCACAGCCGGGACTCCCGGGAACACGTGCGCAAGAGGGAGGCGCCCCGAGAGAGGGGCCCGCACTCGCCTGCCCCCGAGAGCCATTTCAGGGAACACCAGTTCGAGGAGTGTCTGAACATCACGCAGCTGCTGTCCTACTACGGCCTGAGTTCCGAGTCGCTCATCTCGCCGGCGCAGTTCACCTACCTGTGCCCCGCACTGCTCTACCAGATCGACAGCCGCGTGTGCATCCGCCACTTCCACCAGCTGGACATCGAGCATCAGGAGGTGGAGTCGGCGCTCTCAGCCTGGGTCTGGGGTCTCATATCCATCACCATCATCAGCCTGCTGTCTCTGCTGGGGGTCATCCTAGTGCCCATCATCAACCAGTCCTGCTTCAAGTTCCTGCTCACCTTCCTGGTGGCGCTGGCGGTCGGGACGCTGAGCGGAGACGCGCTGCTCCACCTGCTGCCCCACTCCCAGGGGGGCCACGACCACAGCCACGAGGGCCACGAGGGGGCCggggcggaggaggaggaggacttCCTGACGCAGTATGACGGCGTGTGGAAGGGCCTGACCGCCCTGGGGGGCATCTACCTCCTCTTCATCATCGAGCACTGCATCGGCATGTTCAAGCACTACAAGAACCAAGCGGGAAGCTGGTGCCGGAAGAGCCGGAAAGGGGACGAAACCACCATCGGCAGGAAGCTGTCGGATCACAAACTGAACCGGCGCTCCGATGCCGAGTGGCTCCACCTCAGACCCCTGACAGCGGAGGGGCCGGACAGTTCTGCGCTGTCGTGTGACACCAAACACAACGACACCCAGCTGTCCGAGCTGCCGGACCCCGAGTCCCCCGGTGAGACGGCGCTGGCCGCGGTGGAGCCACAGTGCCCAGAGCCCGAGTCCCCCGCCAAGGAGAATGGCAGGAAGGCCAAGACGAAGAAGCACGGGCACAGCCACGGCCACGGGCACGGCCACTCACACCACAGCCACTGCCACTCCGACCAGGAGATGAAGGATGCGGGCATCGCCAGCATCGCCTGGATGGTCATCATGGGTGACGGCATGCACAACTTCAGCGACGGCCTGGCCATAGGAGACTTCGCGGTGCTGCTCAAGGCGGGGATGTCAGTGAAGCAGGCCATCGTGTACAACCTGCTGTCAGCGCTCATGGCGTACGTGGGCATGCTGATCGGCACAGCTGTGGGCCAGTACACGCACAACGTCACCAGCTGGATCTTCGCCGTCACCGCCGGCATGTTCCTCTACGTGGCTCTGGTGGACATGctgCCCGAGATGCTTCACGGCGACAGCGAAGAGCACAAGCGCTGCCGGCTGGGCCACTTCCTACTGCAGAACCTAGGCATGCTGGTGGGCTTCGGCACCATGCTGCTCATCGCCATCTTCGAGGACCGCATCGTCCTGGACATCCAGTTCTAGCCGGagccgccccccccgcccctcggCACGCCTCACCGCCGGGctgcgggggtggggggacgcaaagatatatatttatatatatatatacatccgTGTGTGTAGAGCCAGAGTGGAGAAGAGGATCCGCCTGTTGGTACTTCGCTTCGCCTTAACGCTTGTCGCGGTGCGGGGGGGGCGTGCATGAGCAACTCGCGgccggcggg

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006811 ion transport biological_process

KEGG:

id description
K14716 SLC39A10, ZIP10; solute carrier family 39 (zinc transporter), member 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000765 True 2704 mRNA 0.66 8 2520235 2537868

Neighbor

gene id symbol gene type direction distance location
AMCG00000763 NA coding downstream 120880 2394089 ~ 2399355 (-)
AMCG00000759 NA coding downstream 193630 2262668 ~ 2326605 (-)
AMCG00000755 NA coding downstream 375598 2133482 ~ 2144637 (-)
AMCG00000756 LOC107709571 coding downstream 399476 2098930 ~ 2120759 (-)
AMCG00000757 NA coding downstream 428267 2091703 ~ 2091968 (-)
AMCG00000770 NA coding upstream 515013 3052881 ~ 3055879 (-)
AMCG00000775 NA coding upstream 527942 3065810 ~ 3078543 (-)
AMCG00000776 NA coding upstream 545587 3083455 ~ 3103231 (-)
AMCG00000778 hspe1,LOC107690609 coding upstream 584340 3122208 ~ 3123800 (-)
AMCG00000785 LOC106586374 coding upstream 643611 3181479 ~ 3205611 (-)
G126005 NA non-coding downstream 15 2427941 ~ 2520220 (-)
G126020 NA non-coding downstream 57747 2460715 ~ 2462488 (-)
G125875 NA non-coding downstream 692493 1822252 ~ 1827742 (-)
G125845 NA non-coding downstream 942889 1575361 ~ 1577346 (-)
G125719 NA non-coding downstream 1191587 1323503 ~ 1328648 (-)
G126037 NA non-coding upstream 20123 2557991 ~ 2558249 (-)
G126275 NA non-coding upstream 1012972 3550840 ~ 3552977 (-)
G126296 NA non-coding upstream 1136413 3674281 ~ 3676927 (-)
G126369 NA non-coding upstream 1706861 4244729 ~ 4245041 (-)
G126428 NA non-coding upstream 2099499 4637367 ~ 4637640 (-)
G126017 NA other downstream 62352 2451868 ~ 2457883 (-)
AMCG00000741 gtf3c3,LOC104966512 other downstream 688925 1829544 ~ 1831310 (-)
AMCG00000731 NA other downstream 749210 1762029 ~ 1771025 (-)
AMCG00000719 NA other downstream 1019574 1478740 ~ 1500661 (-)
G125814 NA other downstream 1097825 1386843 ~ 1422410 (-)
G126089 NA other upstream 499063 3036931 ~ 3041964 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other upstream 506299 3044167 ~ 3050016 (-)
G126096 NA other upstream 593846 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other upstream 596008 3133876 ~ 3140489 (-)
AMCG00000804 NA other upstream 1015179 3553047 ~ 3656561 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_07625693_07637462 SLC39A10 coding CI01000009 null 7625554 ~ 7637462 (-)