AMCG00000785 (LOC106586374)


Basic Information

Item Value
gene id AMCG00000785
gene name LOC106586374
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3181479 ~ 3205611 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000785
CCATGTGTCTTTTCCGGGTGCGATCGCGCCGGGTCGATTAGCTGGGTCTGGGAGGACGATGACGTCAGGAGGCGAAGCAACAAGAAACCGGAAGCAGGGCTGCTGTTGAGGAAAACACGGCCGAGTCAGCTGCTCTGCGGCGGACAGACATGCCAGCGGAGGCGATCTAATCTCAGgagCAGCGCGATGGCTGCCGACGACAAatcgtcctcgtcctcctccacACTGGAGCTGAGCGTGGAGGCCCCCCAGACCCCCGGCAGCCCCTCGCACTTCACGCACTTCAAGCCGCTGACACCGGAGCAGGAGGAGCCACCCCTGCGCTCCGCCTACAGCTCCTTCGTCAGCCTCTTCCGCTTCAGCAAAGACGAAGGCCGCCCCCCCGCTGCGGTGGAGAAGACGGAGCCTGTCCCGGGCCCCCaggaaggggagagggggtCTTGGTCCAgcccttccccctccccccggaTTGGCGGGTCACACAGGAAGTCGCACCCCCCTGAGCTGCTCCGGCGCACCTCCACAGCCTCCGAGGGCCGTCGGAAGGCCGAGCCGCCCCTGGGGGGTCATGACCCCCGCACTGCCGTCCAGCTGCGCACGGTCCTGAAGAGACTGAAGGAGATCATGGAGGGAAAGAGCCAGgacAGTGACCTGAAGCAGTACTGGATGCCCGACAGCCAGTGCAAGGAGTGCTACGACTGCAACGAGAAATTCACCACCTTCCGCCGCAGACACCACTGCCGCCTCTGTGGGCAGATCTTCTGCAGCCGCTGCTGTAACCAGGAGATCCCCGGCAAGTTCATGGGCTACACCGGAGACCTGAGGGCGTGCACCTACTGCCGCAAGATCGCGCTGAGCTACGCCCACTCGACCGACTCGAGCTCCATCGGGGAGGACCTGAGCACACTGTCGGACTCGCCCTGCTCCGTGTGCGTGCTGGAGCCCAGCGAGCCGCGCACCCCCGTCGGGGGCCGCAAGGCCAGCCGCAACATCTTCCTGGAGGAGGACCTGGCCTGGCAGAGCCTGATACGCCAGGACTCCCAGAACAGCAGCTTGAGCTCCCGGCTGGCCCCGGTGCAGGAGGACGCGGGCAAGAGTCCTGCCAGGAAAAGGTCGGCCAGCATCACCAACCTGTCCCTGGACCGCTCCGGCTCCTCCATGGTGCCCGCCTACGACAGCTCCATCAGCCCACAGGCCAGCCGGGCTCTGGCCAAGACCGACCCCAACGAGGAGGAGCGCAAGATCCTGCTGGATTCCTCACAACTGAAGGACCTGTGGAAGAAGATCTGCCACCACAGCACCGGCATGGAGTTCCAGGACCATCGCTATTGGCTGCGCACCTATCCCAACTGCATTGTGGGAAAAGAACTGGTCAACTGGCTGCTCAGAAACGGACACATCTCCACCAGGGCCCAGGCCATCGCCATCGGACAGGCACTGGTGGACGGACGCTGGCTGGACTGCGTCACCCACCACGACCAGCTGTTCAGGGACGAGTATGCGCTCTACCGCCCCCTACAGAGCACAGAATTCTCGGAGACCCCCTCCCCGGACAGCGACTCGGTGAATTCCGTGGAAGGGCACTCGGAGCCGTCCTGGTTCAAGGACATCAAGTTCGATGACAGCGACACCGAGCAGATCGCAGATGACGGAGAAGACATCATGCCCACCAGCCCCAGTAAGCGCACCTCGGTCAGCAGTTTCCAGTCTGCTGTGGACAGCGACTCTGCCGCCTCCATCAGTCTCAACGTCGAAATGGACAACGTCAACTTCCACATCAAGAAACATTCCAAGTACCCCCACGTCCCCCCGCATCCCACCGAGCAGAAAGAGTCCCTGTTCAACCGGCGAGTGGAGGAGAAGGCAAAGGAGCTGCTCTTCACCCCGCTGGGCTGGCACCACAGCTCCCTGGACCAGCTTAGGGAGGAGAATGGCGAGAAGAAGGCCATGGAGCGGCTGCTCTCGGCCAACCACAGCCACATGATGgccctcctgcagcagctgctgtACAGCGAGTCCCTGTCGCTGTCGTGGCGTGACGTCATCGTGCCTGTGGTCCGGCAGGTGGTGCAGACGGTGCGGCCGGACGTGCGCGGCTGCGACGACGACATGGACATCCGGCAGTTCGTCCACGTCAAGAAGATTGCTGGAGGGAAGAAGTTTGACTCTGCGGTTGTGAATGGTTTCGTTTGCACCAAGAACATCGCCCATAAAAAGATGAATTCCAACATTAAAAACCCCAAGATCCTGCTGCTGAAGTGCTCCATCGAGTATCTGTACCGAGAGGAGACCAAGTTCACCTGCATCGACCCCATAGTACTGCAGGAGCGGGAGTTCCTGAGGAACTATGTGCAGAGGATCGTGGACGTGCGGCCCACTCTGGTGCTGGTGGAGAAGACGGTGTCCAGGATCGCTCAGGACATGCTGCTGGAGCACGGCATCACCCTGGTCATCAACGTCAAGCCGCAAGTTCTGGACCGCGTGAGCCGGATGACTCAGGGCGACCTGGTGATGTCGATGGACCAGCTTCTGACCAAGCCTCGGCTGGGGACCTGCCACAAGTTCTACCTCCAATCGTTCCAGCTGGGCAGCGACGAGGCTAAGACGCTCATGTTCTTCGAGGGCTGCCCCCACCACCTGGGCTGTACGGTGAAGCTGCGGGGGGCGGTGGAGTACGAGCTGGCCCGGGTCAAGGAGATCCTGGTGTTCATGGTGTGCGTGGCCTACCACTCGCAGCTCGAGATCTCCTTCCTCATGGACGAGTTCGCCATGCCGCCCAGCCTGGCCAAGAGCGGCTCCTTCCCCTGCCTCCTGGAGGGCGGGGGCGGTGGGGCCGAGCACATAGACCTGTTCCAGGCTGGGGGGTCTGCGGCGGGGCTCAAGGAGCCGGAGTGCCCCCCTGAGAAGCTGCCTGCCATCGCGGAGGGGGCGCCGCGTGTCCACAAAGACGGCATGCTCTCGGATGGCGTGGAGGAGCCAGCTGGTGGGAGCGACCCTGCACTGCCCCCCACCGGAGACCCCGAGGTCCCAGCCCCGGCCTCCACCTCCACTGCCAccgccaccccctccccctccccctccccctccccttaCCGCACGTCCATGTCCTCTCCCCCAGCGCCcctcccacccctctctccGCCCTTCCTCCTCCCCGAGTCGGAGATGGAGGCCGTCGGGGAGCCGGCCGCCCCGAGTGAGGAAGGCGGCGAGGCCCCGAGCTCAGAGTTGCCGCCCCGGCTGTTCCGGGACCCCCTGCAGGACGACACGGGGCTGTATATCGCCGAGCAGGTGGCCTCGGCGGACGACCGGCTCAAGTCCTACTCGGTGGCCTTCAAGCAGGAGCTGAAGGATGTCATCCTGTGCATCTCGCCCTTCATCTCCTTCAAGGAGCCCTTCCTGCTGGTGCCCAAGGGCATGCGCTGCCCCAGCCGGGACTACTTCCCCGAGCAGGTCTACCTCTCGCCGCTGCTCAACAAGGACTTCAAGGAGCTGGACAGCCGGCGCAAGAGGCAGCTGCTGAAGGACGTGGCGCCCACCTCCCAGGCCGCCAATGGCAGCCTGCCCCCACGCTCCATCCGGGTGCTGCCCTCCCACCGGCTTACCAGCGCCCGCATCGCCGAGCACCTGGGCAGCAGCCAGGATCTGGCCAAGATGGTGGCCGACTTCCGCGCGCAGGGGGGCCGCATCCGGCAGAGGGACGTGGACCCCTTCGCCCAGAGCCGGGAGCCGTCGGTCAAGAGCTTCTCCAAGAGCAACAGCGAGGAGGAACGGGGGCAGATCCAGAACGAGATGGCCTGGGCGACCAAGATGGACTGTCTGAACCCCGTCAACCACCAGCGAGTATGTGTCCTCTTCAGCAGCTCCTCAGCACAGTCCAACAACGCGCCCAATCCCTGCGTCAGCCCATGGATTGTCACGATGGAGTTCTACGGGAAGAATGACCTGACACTGGGCATATTCCTGGAGAGATACTGTTTCagGCCCTCTTACCAGTGCCCCAGTGTGTTCTGCGAGACCCCCATGGTGCACCACATCCGGCGCTTCGTGCACGGGGAAGGCTGCGTGCAGATCGTGCTGAAAGAGCTGGACTCCCCCGTGCCAGGCTACCAGCACACCATCCTCAACTACTCCTGGTGCCGCATCTGCAAGCAGGTGACTCCCGTGGTCCCCCTGTCCAACGACTCGTGGTCGATGTCCTTTGCCAAATACTTGGAGCTTCGCTTCTACGGCCACCAGTACACGCGCCGCGCCAACATCGAGCCCTGCGGCCACTCCATCCACAAGGACTACCACCAGTACTTCTCCTACAACCAGATGGTGGCTTCCTTCAGCTACACCCCTGTGAGGCTGCTGGAGATCTGCCTTCCTGCCCCCAAGATTTACATCAAAAACCAGGGCCCTTCAAAGATCAGCCTCCTGCAGGACCTCAAGGACTTCTCCCAGAAAGTCTCTCAGGTCTACCTGGCCATAGACGACCGGCTCACCTCCCTGAAGACGGACACCTTCAGCAAGACCCGTGAGGAGAAGATGGAGGACCTGTTCGCACAGAAAGACATGGAGGAGGTGGAGCTGAGGAACTGGATCGAGAAGCTGCAGGCGCGGCTGCTCTCCTGCGGCCTGGACTCCTCCCAGCAGCTGCAGGCCGTGCTGGAGTCGGTGGTGGTGAAGAAGCAGAACCTGTGCGAGATGCTGCAGTCCTGGAACAACCGGCTGCAGGACCTGTTTCAGcaggagaagggaaggaagcGTCCCTCCGTCCCGCCCAGCCcaggcagacacagacagactgaggACAGCAAGACAAGTGTCCTGGAGTCGTCGCCTCGCAATCCCTCCCCGGTGGTGCAGAACGGAGAGAGAGAGGACCGGCACCTGAGCAACATGCCTTCCAGCACCGCCTCGTCCTCGCTGCTCCAGCTGCCGTCCCCGGGGGATCCCGTCTCCGAGCAGCTGTCCGCGGGGCCCTCCTTCCCCAGCACCGCGGGCGTCGGTGACCAGGACACCGCCAGCCTGGCCGAGGATGTGTTCGACGGGCACCAGCTGGGCTCCAGCGACAGCCAGGTGAAGGAGAAGTCCACCATGAAAGCGATCCTGGCGAACTTGCTGCCCGGAAACAGCTACAATCCCATTCCCTTGCCTTTTGACCCGGACAAGCACTACCTGATGTACGAGCATGAGCGAGTGCCCATCGCCGTGTGCGAGAGAGAGCCCAGCTCCATCATCGCCTTCGCGCTCAGCTGTAAGGAATATAAGACTGCGCTGGAGGAGCTGTCCAAAAGCAGCGTGCCGACGGGGGGAGAGGACCCAGCGCAGCCTGGCAGCACCGCGGAGAGCAGGGCGAAGATGAGCAGCCCGGCCAAGCAGAGCGAGCCGGGAGCCACGCAGCTGGGACGCAGCTCCGAGTCGGACTCCCTCAAAGACGGGGACGGAGGAGACAAGCAGAAGAAGCAAGCCGGCAACCCGCACGTCGAGCTGCAGTTCTCCGACGCCAACGCCAAGTTCTACTGCCGCGTCTACTACGCCGAGGAGTTCCACAGCATGAGGGAGCAGATCATGGAGAGCAAGGAGGAGGACTTTGTGCGCTCGCTCTCCCACTGCGTCAACTGGCAGGCGCGCGGGGGCAAGTCCGGGGCCGTCTTCTACGCCACCGAGGATGACCGGTTCATCCTGAAGCAGATGCCCCGCCTCGAGGTGCAGTCCTTCCTGGATTTCGCGCCCCACTATTTCAGCTACATCACAGGCGCCGTGCAGCAGAAGaggCCGACAGCTCTAGCCAAGATCCTGGGCGTCTATCGGATTGGCTACAAAAACTCGCAGAACAACACGGAGAAGAAACTTGACCTCCTCGTCATGGAGAACCTCTTCTACGGACGCAAAATGGCGCAGGTGTTCGACCTGAAGGGCTCCCTGCGCAACCGCAACGTGAAGACGGACTCGGGCAAGGAGAGCTGCGAGGTGGTGCTGTTGGACGAGAACCTGCTGAAGCTCGTCCACGACAACCCGCTGTACATCCGCTCACACTGCAAGGCCATCCTGCGCGCCTCCATCCACAGCGACGCCTACTTCCTGTCCAGCCACCTCATCATCGACTACTCCCTGCTGGTGGGGCGCGACGACACCACGGACGAGCTGGTCGTGGGCATCATCGACTACATACGGACGTTCACGTGGGACAAGAAGCTGGAGATGGTTGTGAAATCCACTGGAATCCTGGGCGGCCAAGGTAAAATGCCAACCGTGGTCTCCCCAGAACTGTACCGGGCCCGGTTCTGTGAAGCTATGGACAAATATTTCCTCATGGTCCCGGACCACTGGACCGGACTGGGCGTCAACTGCTGaagagcctttttttttttttttttcttctctctctccgattttagttttttttttattgtccatatgtatatgtagaGCATTAAAACCCCGCGACGGAAGCGGCTATCATGACCGTTTAACACTTGAAATAACGCACTGACGGGAGGCGAGCTGCGGCCCCTCGCCCATCTCGAGGACGGCGGCCGTTCCCGCTCCGGGCGCCGGACAAGAAGCACAACTCGAACAAAGTCCTGCCGCTTTGCCGCCCGCGGAGGGGAGGCAGAGCCAGGCGGCCACAGATTAACATTCCAGAGCGACGGCGCGTCTGCGGCGGGGTCGGAAAACCCGCCCGGCTGCGACGGACGCTGAGGGCAAACCGCGGGGGACTGGACACGTTACCTGCTCGACAACTTTGCCATTTTCACAGGTGTGCAGGGCTCCTTCAGAGGCCTCTGTGAACCGTCGTCTGCTAATACTAGAGGGGGACAGGAATCAATGTGACTAAACCTACTGAGTCAGTTAGTTAGTTTCAGTAATTAGGCGCTCGGGTAGAACGCAGTCCAGAAGGCGCTGTGGCCCCCGAGAACCACGGTGGGTAACCCTGACCGCGTCGAGCCAGTATTGCTGGGGGTCACGGCAGGACGAGGCAGGGAGAACCAACGAAACGGGCGTGAGATTCATCGTGAGATTATATCGACAGGTTGCtatgtaaagaaatatatatatataaaaattaaaggaaGATGTAAACTGGTCTGTCTAACTGTACAGGAGTGATGTCATTAAAGGAGCCTGACGCTGCTAAAGGGTGGACGTGCAGTAGAGCTAACATGgtctttttctactttttttttttccccccacccgTTTTCTGTAACACCTGGAGGACTTAAAGACGGGCTTCTTAGCCTCGTCTGAAGCAAAGCCTGCTGGGAATACAGCTGGTGGAGAGACGGATAACCCTGTATTCACTCGGCTGAGCCCTAAATCGATCCAGCCTTCAGTGTAATTGAgtgattttaaatagatttcagCTGCGAGAAAAGGTTTCTATCCGTTTCCTCCACTGATGTACAATCTCTAATTGATTAAGAGGAACAGACAGTTTTAAAGGTGTAATTAAGGAATTAAAGTGATGGCTCACTCTGAAAACCCAACCTGACAAAGTGTTCTGAGGTTAGTTTACGGGAAATAAACCTGTTGTACCGTGGAATGAAGTACCCCTGCAGAAACTATGCAATGAATGAATAGGTagtgtaattaaaatcaaaaccagGTCATCTCCAAAAATACCACACAATAGTAgttacatttctttatatagttaattttcatatttgaatggttttgtaTTGCGTTGTGGATACAGTAACTGTACATACTTATACCGAAACCAGAGAAAATGAACTAAACCTTGGTTCCTTAAAACATCTATATCTTTATCATCACTGACCTGCACGTTTTTGGGTCTCTTTTTGGCTCTAGTATTGGGGTCTGGGAGACAGGAATAAAATGATTTGTGAAAGAAACGAATGTAGATTGTAGTTCAAGTTGCATAGAAGTAGGAAAAGCGGATGTGGAGCTGGGAATATCAGCTCCCTGGATTTCAAAGCTACCTTTCTTGTCGGTGTCTGGTTGTATTGAAACTAACGGTGAAG

Function

NR:

description
PREDICTED: 1-phosphatidylinositol 3-phosphate 5-kinase-like isoform X10

GO: NA

KEGG:

id description
K00921 PIKFYVE, FAB1; 1-phosphatidylinositol-3-phosphate 5-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000785 True 7979 mRNA 0.59 40 3181479 3205611

Neighbor

gene id symbol gene type direction distance location
AMCG00000778 hspe1,LOC107690609 coding downstream 57679 3122208 ~ 3123800 (-)
AMCG00000776 NA coding downstream 78248 3083455 ~ 3103231 (-)
AMCG00000775 NA coding downstream 102936 3065810 ~ 3078543 (-)
AMCG00000770 NA coding downstream 125600 3052881 ~ 3055879 (-)
AMCG00000765 NA coding downstream 643611 2520235 ~ 2537868 (-)
AMCG00000784 NA coding upstream 27810 3233421 ~ 3237636 (-)
AMCG00000788 NA coding upstream 70647 3276258 ~ 3314125 (-)
AMCG00000794 NA coding upstream 305508 3511119 ~ 3517210 (-)
AMCG00000795 NA coding upstream 339678 3545289 ~ 3568649 (-)
AMCG00000796 faima,LOC107723686,LOC107686598,LOC108425966,LOC108266416 coding upstream 370826 3576437 ~ 3582185 (-)
G126037 NA non-coding downstream 623230 2557991 ~ 2558249 (-)
G126005 NA non-coding downstream 661259 2427941 ~ 2520220 (-)
G126020 NA non-coding downstream 718991 2460715 ~ 2462488 (-)
G125875 NA non-coding downstream 1353737 1822252 ~ 1827742 (-)
G125845 NA non-coding downstream 1604133 1575361 ~ 1577346 (-)
G126275 NA non-coding upstream 345229 3550840 ~ 3552977 (-)
G126296 NA non-coding upstream 468670 3674281 ~ 3676927 (-)
G126369 NA non-coding upstream 1039118 4244729 ~ 4245041 (-)
G126428 NA non-coding upstream 1431756 4637367 ~ 4637640 (-)
G126429 NA non-coding upstream 1432347 4637958 ~ 4638285 (-)
G126096 NA other downstream 32227 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 40990 3133876 ~ 3140489 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other downstream 131463 3044167 ~ 3050016 (-)
G126089 NA other downstream 139515 3036931 ~ 3041964 (-)
G126017 NA other downstream 723596 2451868 ~ 2457883 (-)
AMCG00000804 NA other upstream 347436 3553047 ~ 3656561 (-)
G126427 NA other upstream 1430485 4636096 ~ 4636516 (-)
AMCG00000838 cacnb4,LOC108434427 other upstream 1751527 4957138 ~ 4982651 (-)
G126700 NA other upstream 2367094 5572705 ~ 5573027 (-)
AMCG00000888 LOC102209482 other upstream 3483957 6689568 ~ 6733817 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location