AMCG00001753


Basic Information

Item Value
gene id AMCG00001753
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14605507 ~ 14622603 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001753
TGGCTAGTGACCTCCTATTTAGGATGATAAGTGACAAGCCAGGGGGGAGTGGTTAGAGCCGGCTCCAGACATTTCCATCTCCTCTCAGCTAATCATATAAGAAATTGCAGCTGAATCAAGATAGTGGCTTTGATAAAGGCAACAGAGGCAGGCAAATCTGATCAGAGGGGGAGAAATCTGTGCCAGGACAAAAACTTCTTGCTTTTAATAGATTTattcttcctttttcatttcattcctGAGAGAATTTAAAGACTACTGGAAAGAGTTATACAGAACAGTGGCTCCTGAAGAGAAAGCTGTGCAATAATTCACTTCAGGACTTTAAACCTGAAGGAGTGGAAAacgaagtttttttttttttaacctgtaaacttaagagagagagcgagagagaaagaaaatgttgaatacGTGTTTATTGTTGCTAAGTTGTATTTTTACTCTGGGAACAGGGTACAGGAAGAGTGCAGAGACTCCAAGAAAGAGAGAATATCAGATTCAGAACGGCCCCTGCAGCTACACCTTTCTCCTCCCTGAACAGAACAACTGCAGGACCTCAACCAGCTCCTATGCCGGCAACTCGCTGCAAAAAGATGACCCGGCCGAGTATGAAGAGTCAGTACAGAGACTGGAGCAGCTAGAGAACGCCatggaaaacaacacacagtGGCTCCAAAAGCTAGAAAACTACATTCAAGACAACATGAAGCAGGATATGGTGCAGATCCAGCAAAACGCTGTGCACAACCACACGGCGTCCATAATTGAATTCGGAACAAACCTATTAAGCCAAACTGCAGAGCACACCCGCAAATTTGCCAACGTAGAAGCACAGGTTATAAATCAAACCACAAGGCTTGAACTTCAACTTCTTGAGAATTCACTGTCAACAAATaaactagaaaaacaaattatagtccaaacaaatgaaataagTAAACTACATGAAAAAAACAGTTTCCTAGAGAAGCGGGTGGAAGAGATGGAAGACAAACGTCTGGCTGAGCTGAAGGCCGTGAAAGAGGAGAAGGAGCAGCTACAGCAGCTGGTCCTGCGACAAAACTCGGTCATCGAAGAACTGGAGCAGCAGCTGGTCCTGGCGACGTCCAACAACTCGGCCTTACAGAAACAGCAGCAGACCTTGATGGAGACGGTCAACAATCTCATCTCCTCCATATCCTTCCCTAACAAGAAAAAGACAGCAGTGGTTCCAGTAGCCGAAACGCTGTATAAAGATTGCGCTGCCGTCTTCAAGTCTGGAAAAAACAGTAATGGCGTCTATTCCCTGGCACGCCCAAACTCCACAGAGCCCATCAAGgcATACTGTGATATGGAGTCTAGTGGAGGCGGGTGGACAGTCCTTCAGCGCCGCATGGACGGACGACTGGATTTTCACCGTACATGGAAAGAGTACAAAACGGGGTTTGGTGACCCTGCTGGGGAACACTGGCTGGGAAATGAATTTGTTTCTCAACTCACCAATCAACAACCCTATGTCCTGAGGATCCAGCTGAAAGATTGGGAAGGGAATGAGGGATATTCTCAATACGAACAGTTTTATCTCAGCCCTGAAGTACAGAACTACAGGATACACCTTAAGGGCTACAGTGGAACAGCAGGCAAAATCAGTAGCCTTGTTCAGCCAGGAAGTGATTTTAGTACAAAGGATGCAGACAATGACAAATGTGTTTGCAAGTGTTCACAACTAACTACAGGAGGGTGGTGGTTCGATGCCTGTGGCCCTTCGAATCTGAATGGAATATATTACCAAATGGGACAGAACACAAACAAGTTCAATGGGATCAAATGGTACTACTGGAAAGGGTCGGGCTACTCGCTGAAATCGACTGTAATGATGATCAGACCAGCAGATTTCCAGTAGCTCTTCTGCTCATAGACTTTTGACGCATTCTGATGTAAAGTAACTATTTGTGAGGCCATTTTTGCAGCATTTTAACTTCTaagctttatttttcatatttaagaaCAAATACTTTGCATTCCTGGTTTTTATCTGCAAAACGCTCACTTTGCTTAAAGGAAATCCTACACACAACCTTGAAGATGGAAGCCTTTGAACTTATCGCTGAAAAAAGTGGGCTTTGGACTATGGCAGTCTGTGCTCTTGAATCTAAAACAGCCAGAGGACTACAATGGGTTCAGCAGAAAGCCCTCACCTTTATTTATAGATAACTGGAACTGTGagagacattttaaagaaagtataCTTTTCTTTCTAACAAGTTTTCTAATCTTGGGGGAACTGCCACAGCAACATGGAGACCAGTTTCTAAGATTGTTATAATGTTTACACTGAATTAGCTccataaatacaaatgtctttTTACAGAATTAACATTTGCTATACGAGTTATACATCTGTAAAGGGAAATGGTTTGTCTCTGTAGATGAGTGTCCTGAATTGGCTGTAAATAAACTACTACGGATTAGAGAATGGTATACATTGGGGGTGTATAGCGTCATTGATCTAGGGCTGTAACCCCAACGCCCAATCTCTTAATGCTCCTCAGTGTAAGTTTGACATTtatctgtaataaaacaattaaaaatgataaggATCGACCAAGGCTAAATGGTATGTTTATCAAATTGTAGGTATATTGtgcaaatattgtaaaatatgaggcaatttatttttacagaagcAAGCCTCCCACATTTGTAAGATATCCTGTAATGTATAACACTTGGGGAGTTTCTTTCAAACACCCTTTTGGCTGACTAAGTtttattaaaagcttttcttGCCATAACA

Function

GO: NA

KEGG:

id description
K05466 ANGPT2; angiopoietin 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001753 True 2779 mRNA 0.42 9 14605507 14622603

Neighbor

gene id symbol gene type direction distance location
AMCG00001750 NA coding upstream 36502 14544548 ~ 14569005 (+)
AMCG00001749 ick,LOC106612589,LOC102778244 coding upstream 61060 14533876 ~ 14544447 (+)
AMCG00001747 NA coding upstream 81239 14520040 ~ 14524268 (+)
AMCG00001751 LOC107664697,LOC107712343,LOC107597698 coding upstream 87422 14496967 ~ 14518085 (+)
AMCG00001748 gclc,LOC107712340 coding upstream 110818 14482765 ~ 14494689 (+)
AMCG00001757 csmd1,LOC107565077,LOC107717843,LOC107564890 coding downstream 99323 14721926 ~ 14797935 (+)
AMCG00001767 csmd1,LOC107565078,LOC107564890 coding downstream 322203 14944806 ~ 14949138 (+)
AMCG00001766 LOC106589815 coding downstream 393629 15016232 ~ 15118185 (+)
AMCG00001758 NA coding downstream 641495 15264098 ~ 15266184 (+)
AMCG00001759 rps6ka2,LOC107750746,LOC107717821,LOC107702677,LOC105021344 coding downstream 663261 15285864 ~ 15325738 (+)
G160116 NA non-coding upstream 42138 14558766 ~ 14563369 (+)
G160107 NA non-coding upstream 78999 14525737 ~ 14526508 (+)
G160036 NA non-coding upstream 299247 14306025 ~ 14306260 (+)
G160024 NA non-coding upstream 337785 14267388 ~ 14267722 (+)
G159798 NA non-coding upstream 1728821 12785795 ~ 12876686 (+)
G160129 NA non-coding downstream 6700 14629303 ~ 14632490 (+)
G160144 NA non-coding downstream 78531 14701134 ~ 14701456 (+)
G160200 NA non-coding downstream 779682 15402285 ~ 15417554 (+)
G160375 NA non-coding downstream 1206173 15828776 ~ 15829766 (+)
G160463 NA non-coding downstream 1491741 16114344 ~ 16114699 (+)
G160026 NA other upstream 335317 14269615 ~ 14270190 (+)
AMCG00001691 NA other upstream 2271807 12329979 ~ 12333700 (+)
AMCG00001645 NA other upstream 3847649 10747489 ~ 10757858 (+)
AMCG00001643 spred2 other upstream 3927653 10655187 ~ 10677854 (+)
AMCG00001630 NA other upstream 4445681 10157734 ~ 10159826 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other downstream 709017 15331620 ~ 15334580 (+)
AMCG00001762 NA other downstream 809734 15432337 ~ 15439031 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other downstream 1614659 16237262 ~ 16377860 (+)
AMCG00001841 NA other downstream 2556991 17179594 ~ 17182601 (+)
AMCG00001846 NA other downstream 2794748 17417351 ~ 17462934 (+)

Expression


Co-expression Network