G160144


Basic Information

Item Value
gene id G160144
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14701134 ~ 14701456 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU201615
tgttaatgagggaaataagtatttgatcccctatcaatcagcaagatttctggctcccaggtatcttttatacaggtaacgagctgagattaggagcactctcttaaagggagtgctcctaatctcagctcgttacctgtataaaagacatctgtccacagaagcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgaccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtggcaacagttggtgcgattattcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201615 True 323 lncRNA 0.46 1 14701134 14701456

Neighbor

gene id symbol gene type direction distance location
AMCG00001753 NA coding upstream 78531 14605507 ~ 14622603 (+)
AMCG00001750 NA coding upstream 132129 14544548 ~ 14569005 (+)
AMCG00001749 ick,LOC106612589,LOC102778244 coding upstream 156687 14533876 ~ 14544447 (+)
AMCG00001747 NA coding upstream 176866 14520040 ~ 14524268 (+)
AMCG00001751 LOC107664697,LOC107712343,LOC107597698 coding upstream 183049 14496967 ~ 14518085 (+)
AMCG00001757 csmd1,LOC107565077,LOC107717843,LOC107564890 coding downstream 20470 14721926 ~ 14797935 (+)
AMCG00001767 csmd1,LOC107565078,LOC107564890 coding downstream 243350 14944806 ~ 14949138 (+)
AMCG00001766 LOC106589815 coding downstream 314776 15016232 ~ 15118185 (+)
AMCG00001758 NA coding downstream 562642 15264098 ~ 15266184 (+)
AMCG00001759 rps6ka2,LOC107750746,LOC107717821,LOC107702677,LOC105021344 coding downstream 584408 15285864 ~ 15325738 (+)
G160129 NA non-coding upstream 68644 14629303 ~ 14632490 (+)
G160116 NA non-coding upstream 137765 14558766 ~ 14563369 (+)
G160107 NA non-coding upstream 174626 14525737 ~ 14526508 (+)
G160036 NA non-coding upstream 394874 14306025 ~ 14306260 (+)
G160024 NA non-coding upstream 433412 14267388 ~ 14267722 (+)
G160200 NA non-coding downstream 700829 15402285 ~ 15417554 (+)
G160375 NA non-coding downstream 1127320 15828776 ~ 15829766 (+)
G160463 NA non-coding downstream 1412888 16114344 ~ 16114699 (+)
G160464 NA non-coding downstream 1415749 16117205 ~ 16119266 (+)
G160542 tubb4b,LOC106575097,LOC105893757 non-coding downstream 1575350 16276806 ~ 16278054 (+)
G160026 NA other upstream 430944 14269615 ~ 14270190 (+)
AMCG00001691 NA other upstream 2367434 12329979 ~ 12333700 (+)
AMCG00001645 NA other upstream 3943276 10747489 ~ 10757858 (+)
AMCG00001643 spred2 other upstream 4023280 10655187 ~ 10677854 (+)
AMCG00001630 NA other upstream 4541308 10157734 ~ 10159826 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other downstream 630164 15331620 ~ 15334580 (+)
AMCG00001762 NA other downstream 730881 15432337 ~ 15439031 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other downstream 1535806 16237262 ~ 16377860 (+)
AMCG00001841 NA other downstream 2478138 17179594 ~ 17182601 (+)
AMCG00001846 NA other downstream 2715895 17417351 ~ 17462934 (+)

Expression


Co-expression Network