Gene
RNA
| Item | Value |
|---|---|
| gene id | G158362 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 6506313 ~ 6506516 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU199385 | True | 204 | lncRNA | 0.43 | 1 | 6506313 | 6506516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001506 | phactr2 | coding | downstream | 59349 | 6422852 ~ 6446964 (-) |
| AMCG00001505 | NA | coding | downstream | 86427 | 6409668 ~ 6419886 (-) |
| AMCG00001504 | NA | coding | downstream | 239914 | 6265529 ~ 6266399 (-) |
| AMCG00001502 | NA | coding | downstream | 282582 | 6198435 ~ 6223731 (-) |
| AMCG00001503 | NA | coding | downstream | 351963 | 6153766 ~ 6154350 (-) |
| AMCG00001513 | NA | coding | upstream | 11572 | 6518088 ~ 6535716 (-) |
| AMCG00001508 | NA | coding | upstream | 40498 | 6547014 ~ 6561210 (-) |
| AMCG00001521 | galnt2,LOC107725470,LOC106589660,LOC107743534,LOC107676591,LOC107666462 | coding | upstream | 98993 | 6605509 ~ 6643189 (-) |
| AMCG00001520 | NA | coding | upstream | 210517 | 6717033 ~ 6736026 (-) |
| AMCG00001526 | rab4a,LOC107601855,LOC107666448 | coding | upstream | 285018 | 6791534 ~ 6798358 (-) |
| G158328 | NA | non-coding | downstream | 147647 | 6358249 ~ 6358666 (-) |
| G158326 | NA | non-coding | downstream | 242330 | 6263223 ~ 6263983 (-) |
| G158302 | NA | non-coding | downstream | 314800 | 6187771 ~ 6191513 (-) |
| G158262 | NA | non-coding | downstream | 504692 | 6001399 ~ 6001621 (-) |
| G158260 | NA | non-coding | downstream | 505255 | 5998127 ~ 6001058 (-) |
| G158401 | NA | non-coding | upstream | 86592 | 6593108 ~ 6595545 (-) |
| G158415 | NA | non-coding | upstream | 229590 | 6736106 ~ 6736901 (-) |
| G158424 | NA | non-coding | upstream | 247180 | 6753696 ~ 6753960 (-) |
| G158425 | NA | non-coding | upstream | 250399 | 6756915 ~ 6757129 (-) |
| G158426 | NA | non-coding | upstream | 255961 | 6762477 ~ 6762699 (-) |
| AMCG00001491 | NA | other | downstream | 623993 | 5880184 ~ 5882320 (-) |
| AMCG00001487 | NA | other | downstream | 759988 | 5657962 ~ 5746325 (-) |
| G158207 | NA | other | downstream | 908474 | 5595384 ~ 5597839 (-) |
| AMCG00001483 | NA | other | downstream | 1062732 | 5441627 ~ 5443581 (-) |
| G158123 | NA | other | downstream | 1088070 | 5377430 ~ 5418243 (-) |
| AMCG00001514 | NA | other | upstream | 1359 | 6507875 ~ 6509704 (-) |
| G158434 | actc1a,acta2,LOC103359577,LOC105907633,LOC103457336,LOC107756589,LOC107594158,LOC103374497 | other | upstream | 265822 | 6772338 ~ 6776658 (-) |
| AMCG00001554 | NA | other | upstream | 1155575 | 7662091 ~ 7664572 (-) |
| AMCG00001557 | NA | other | upstream | 1284865 | 7791381 ~ 7795966 (-) |
| AMCG00001594 | NA | other | upstream | 1585812 | 8092328 ~ 8095726 (-) |
